RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 GCHFRP30047 84 aa-1.02□□□□□ -2.57
SMC4-207ENST00000467263 NPC2P61916 151 aa-1.02□□□□□ -2.57
SMC4-207ENST00000467263 KIAA0100Q14667 2235 aaKnown RBP-1.02□□□□□ -2.57
SMC4-207ENST00000467263 SLC48A1Q6P1K1 146 aa-1.02□□□□□ -2.57
SMC4-207ENST00000467263 TMEM91Q6ZNR0 172 aa-1.02□□□□□ -2.57
SMC4-207ENST00000467263 C20orf197Q8N268 126 aa-1.02□□□□□ -2.57
SMC4-207ENST00000467263 COX7B2Q8TF08 81 aa-1.02□□□□□ -2.57
SMC4-207ENST00000467263 CALML5Q9NZT1 146 aa-1.02□□□□□ -2.57
SMC4-207ENST00000467263 MYH9P35579 1960 aaKnown RBP-1.03□□□□□ -2.57
SMC4-207ENST00000467263 PTPRMP28827 1452 aa-1.03□□□□□ -2.57
SMC4-207ENST00000467263 ZNF815PA8K554 130 aa-1.03□□□□□ -2.57
SMC4-207ENST00000467263 SPRR2DP22532 72 aa-1.03□□□□□ -2.57
SMC4-207ENST00000467263 TMEM128Q5BJH2 165 aa-1.03□□□□□ -2.57
SMC4-207ENST00000467263 SSBP3-AS1Q7Z2R9 100 aa-1.03□□□□□ -2.57
SMC4-207ENST00000467263 NDUFA11Q86Y39 141 aa-1.03□□□□□ -2.57
SMC4-207ENST00000467263 CYP4F30PQ9H0H9 118 aa-1.03□□□□□ -2.57
SMC4-207ENST00000467263 DNAJC15Q9Y5T4 150 aa-1.03□□□□□ -2.57
SMC4-207ENST00000467263 V9GYV3 84 aa-1.03□□□□□ -2.57
SMC4-207ENST00000467263 C2CD3Q4AC94 2353 aa-1.04□□□□□ -2.58
SMC4-207ENST00000467263 TMEM14DPA8MWL7 114 aa-1.04□□□□□ -2.58
SMC4-207ENST00000467263 MT-ND4LP03901 98 aa-1.04□□□□□ -2.58
SMC4-207ENST00000467263 KRTAP19-7Q3SYF9 63 aa-1.04□□□□□ -2.58
SMC4-207ENST00000467263 FAM74A4Q5TZK3 123 aa-1.04□□□□□ -2.58
SMC4-207ENST00000467263 TOMM20LQ6UXN7 152 aa-1.04□□□□□ -2.58
SMC4-207ENST00000467263 UBE2DNLQ8IWF7 75 aa-1.04□□□□□ -2.58
SMC4-207ENST00000467263 NOP16Q9Y3C1 178 aaKnown RBP-1.04□□□□□ -2.58
SMC4-207ENST00000467263 XIRP1Q702N8 1843 aaKnown RBP-1.04□□□□□ -2.58
SMC4-207ENST00000467263 PHIPQ8WWQ0 1821 aa-1.04□□□□□ -2.58
SMC4-207ENST00000467263 PIEZO2Q9H5I5 2752 aa-1.04□□□□□ -2.58
SMC4-207ENST00000467263 OVOS2A0A0G2JMS6 1433 aa-1.05□□□□□ -2.58
SMC4-207ENST00000467263 A0A1B0GV72 72 aa-1.05□□□□□ -2.58
SMC4-207ENST00000467263 DPM2O94777 84 aa-1.05□□□□□ -2.58
SMC4-207ENST00000467263 PAEPP09466 180 aa-1.05□□□□□ -2.58
SMC4-207ENST00000467263 ERG28Q9UKR5 140 aa-1.05□□□□□ -2.58
SMC4-207ENST00000467263 NHSL1Q5SYE7 1610 aa-1.06□□□□□ -2.58
SMC4-207ENST00000467263 BIVM-ERCC5R4GMW8 1640 aa-1.06□□□□□ -2.58
SMC4-207ENST00000467263 TRGV1A0A0A0MS02 117 aa-1.06□□□□□ -2.58
SMC4-207ENST00000467263 INSL4Q14641 139 aa-1.06□□□□□ -2.58
SMC4-207ENST00000467263 DEFB109BQ30KR1 87 aa-1.06□□□□□ -2.58
SMC4-207ENST00000467263 OR8I2Q8N0Y5 310 aa-1.06□□□□□ -2.58
SMC4-207ENST00000467263 ATP6V0E2Q8NHE4 81 aa-1.06□□□□□ -2.58
SMC4-207ENST00000467263 PRO0255Q9UI72 69 aa-1.06□□□□□ -2.58
SMC4-207ENST00000467263 M0R3E3 92 aa-1.07□□□□□ -2.58
SMC4-207ENST00000467263 BANF2Q9H503 90 aa-1.07□□□□□ -2.58
SMC4-207ENST00000467263 BSNQ9UPA5 3926 aa-1.08□□□□□ -2.58
SMC4-207ENST00000467263 MAP1BP46821 2468 aaKnown RBP-1.08□□□□□ -2.58
SMC4-207ENST00000467263 DEGS1O15121 323 aa-1.08□□□□□ -2.58
SMC4-207ENST00000467263 SMIM24O75264 130 aa-1.08□□□□□ -2.58
SMC4-207ENST00000467263 RBP4P02753 201 aa-1.08□□□□□ -2.58
SMC4-207ENST00000467263 WFDC2Q14508 124 aa-1.08□□□□□ -2.58
SMC4-207ENST00000467263 TMEM244Q5VVB8 128 aa-1.08□□□□□ -2.58
SMC4-207ENST00000467263 SMPXQ9UHP9 88 aa-1.08□□□□□ -2.58
SMC4-207ENST00000467263 BORCS7-ASMTA0A0B4J1R7 106 aa-1.09□□□□□ -2.58
SMC4-207ENST00000467263 HLA-DRB4P13762 266 aa-1.09□□□□□ -2.58
SMC4-207ENST00000467263 S100GP29377 79 aa-1.09□□□□□ -2.58
SMC4-207ENST00000467263 CLLU1Q5K131 121 aa-1.09□□□□□ -2.58
SMC4-207ENST00000467263 BATF3Q9NR55 127 aa-1.09□□□□□ -2.58
SMC4-207ENST00000467263 HLA-DRB4X5D2U9 266 aa-1.09□□□□□ -2.58
SMC4-207ENST00000467263 NRXN2Q9P2S2 1712 aa-1.09□□□□□ -2.58
SMC4-207ENST00000467263 PBRM1Q86U86 1689 aa-1.1□□□□□ -2.58
SMC4-207ENST00000467263 UHRF1BP1LA0JNW5 1464 aa-1.1□□□□□ -2.59
SMC4-207ENST00000467263 GOLGA3Q08378 1498 aa-1.1□□□□□ -2.59
SMC4-207ENST00000467263 TRAV12-3A0A0B4J271 114 aa-1.1□□□□□ -2.59
SMC4-207ENST00000467263 J3KT08 172 aa-1.1□□□□□ -2.59
SMC4-207ENST00000467263 SPCS2Q15005 226 aa-1.1□□□□□ -2.59
SMC4-207ENST00000467263 PLCE1Q9P212 2302 aa-1.1□□□□□ -2.59
SMC4-207ENST00000467263 ARFGEF1Q9Y6D6 1849 aa-1.1□□□□□ -2.59
SMC4-207ENST00000467263 KMT2CQ8NEZ4 4911 aaKnown RBP-1.11□□□□□ -2.59
SMC4-207ENST00000467263 APC2O95996 2303 aa-1.11□□□□□ -2.59
SMC4-207ENST00000467263 PRM1P04553 51 aa-1.11□□□□□ -2.59
SMC4-207ENST00000467263 ATP11AUNQ6ZP68 121 aa-1.11□□□□□ -2.59
SMC4-207ENST00000467263 CNFNQ9BYD5 112 aa-1.11□□□□□ -2.59
SMC4-207ENST00000467263 PARP14Q460N5 1801 aa-1.11□□□□□ -2.59
SMC4-207ENST00000467263 CCDC179H3BU77 68 aa-1.12□□□□□ -2.59
SMC4-207ENST00000467263 J3QLW9 94 aa-1.12□□□□□ -2.59
SMC4-207ENST00000467263 FABP1P07148 127 aa-1.12□□□□□ -2.59
SMC4-207ENST00000467263 TFAMQ00059 246 aaKnown RBP-1.12□□□□□ -2.59
SMC4-207ENST00000467263 ARAP1Q96P48 1450 aa-1.12□□□□□ -2.59
SMC4-207ENST00000467263 A0A0D9SFI3 127 aa-1.13□□□□□ -2.59
SMC4-207ENST00000467263 G3V318 75 aa-1.13□□□□□ -2.59
SMC4-207ENST00000467263 RPS28P62857 69 aaKnown RBP-1.13□□□□□ -2.59
SMC4-207ENST00000467263 CENPHQ9H3R5 247 aa-1.13□□□□□ -2.59
SMC4-207ENST00000467263 SCP2D1Q9UJQ7 156 aa-1.13□□□□□ -2.59
SMC4-207ENST00000467263 V9GYQ6 96 aa-1.13□□□□□ -2.59
SMC4-207ENST00000467263 FAT2Q9NYQ8 4349 aa-1.13□□□□□ -2.59
SMC4-207ENST00000467263 SPTBN1Q01082 2364 aaKnown RBP-1.13□□□□□ -2.59
SMC4-207ENST00000467263 ALMS1Q8TCU4 4167 aa-1.14□□□□□ -2.59
SMC4-207ENST00000467263 PCLOQ9Y6V0 5065 aa-1.14□□□□□ -2.59
SMC4-207ENST00000467263 COL6A3P12111 3177 aa-1.14□□□□□ -2.59
SMC4-207ENST00000467263 MAP1AP78559 2803 aaPredicted RBP-1.15□□□□□ -2.59
SMC4-207ENST00000467263 TRAV36DV7A0A075B6V5 113 aa-1.15□□□□□ -2.59
SMC4-207ENST00000467263 YPEL1O60688 119 aa-1.15□□□□□ -2.59
SMC4-207ENST00000467263 SPINK8P0C7L1 97 aa-1.15□□□□□ -2.59
SMC4-207ENST00000467263 SPAG11BQ08648 103 aa-1.15□□□□□ -2.59
SMC4-207ENST00000467263 LSM2Q9Y333 95 aaKnown RBP-1.15□□□□□ -2.59
SMC4-207ENST00000467263 PDZD2O15018 2839 aa-1.16□□□□□ -2.59
SMC4-207ENST00000467263 PPRC1Q5VV67 1664 aaKnown RBP-1.16□□□□□ -2.59
SMC4-207ENST00000467263 TRBV10-3A0A0K0K1G6 114 aa-1.16□□□□□ -2.6
SMC4-207ENST00000467263 TNFSF15O95150 251 aa-1.16□□□□□ -2.6
SMC4-207ENST00000467263 EDDM3BP56851 147 aa-1.16□□□□□ -2.6
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms