RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 LOC100131303A0A0U1RQF7 123 aa6.5□□□□□ -1.37
SDCCAG3-208ENST00000466579 NBDYA0A0U1RRE5 68 aa6.5□□□□□ -1.37
SDCCAG3-208ENST00000466579 A0A1W2PPQ1 181 aa6.5□□□□□ -1.37
SDCCAG3-208ENST00000466579 P01737 135 aa6.5□□□□□ -1.37
SDCCAG3-208ENST00000466579 SRIP30626 198 aa6.5□□□□□ -1.37
SDCCAG3-208ENST00000466579 OR10AG1Q8NH19 301 aa6.5□□□□□ -1.37
SDCCAG3-208ENST00000466579 PCNPQ8WW12 178 aaKnown RBP6.5□□□□□ -1.37
SDCCAG3-208ENST00000466579 DAZAP1Q96EP5 407 aaKnown RBP6.5□□□□□ -1.37
SDCCAG3-208ENST00000466579 PRADC1Q9BSG0 188 aa6.5□□□□□ -1.37
SDCCAG3-208ENST00000466579 EIF5A2Q9GZV4 153 aaKnown RBP6.5□□□□□ -1.37
SDCCAG3-208ENST00000466579 SMDT1Q9H4I9 107 aa6.5□□□□□ -1.37
SDCCAG3-208ENST00000466579 IGHV3-73A0A0B4J1V6 119 aa6.49□□□□□ -1.37
SDCCAG3-208ENST00000466579 M0R2N4 97 aa6.49□□□□□ -1.37
SDCCAG3-208ENST00000466579 M0R381 172 aa6.49□□□□□ -1.37
SDCCAG3-208ENST00000466579 RTL8CO15255 209 aa6.49□□□□□ -1.37
SDCCAG3-208ENST00000466579 BTF3P20290 206 aaKnown RBP6.49□□□□□ -1.37
SDCCAG3-208ENST00000466579 WDR73Q6P4I2 378 aa6.49□□□□□ -1.37
SDCCAG3-208ENST00000466579 LINC00336Q6ZUF6 198 aa6.49□□□□□ -1.37
SDCCAG3-208ENST00000466579 FAM231DQ6ZW35 169 aa6.49□□□□□ -1.37
SDCCAG3-208ENST00000466579 NUDT10Q8NFP7 164 aa6.49□□□□□ -1.37
SDCCAG3-208ENST00000466579 OR2D3Q8NGH3 330 aa6.49□□□□□ -1.37
SDCCAG3-208ENST00000466579 NUDT11Q96G61 164 aa6.49□□□□□ -1.37
SDCCAG3-208ENST00000466579 KIF25-AS1Q9Y6Z4 181 aa6.49□□□□□ -1.37
SDCCAG3-208ENST00000466579 XKRY2A2RUG3 117 aa6.48□□□□□ -1.37
SDCCAG3-208ENST00000466579 F2Z2F3 143 aa6.48□□□□□ -1.37
SDCCAG3-208ENST00000466579 GZMBP10144 247 aa6.48□□□□□ -1.37
SDCCAG3-208ENST00000466579 CTRLP40313 264 aa6.48□□□□□ -1.37
SDCCAG3-208ENST00000466579 TTC32Q5I0X7 151 aa6.48□□□□□ -1.37
SDCCAG3-208ENST00000466579 FER1L6-AS1Q8NA97 138 aa6.48□□□□□ -1.37
SDCCAG3-208ENST00000466579 CNFNQ9BYD5 112 aa6.48□□□□□ -1.37
SDCCAG3-208ENST00000466579 KRTAP1-5Q9BYS1 174 aa6.48□□□□□ -1.37
SDCCAG3-208ENST00000466579 A0A087WWL8 130 aa6.47□□□□□ -1.37
SDCCAG3-208ENST00000466579 TRBV10-1A0A0K0K1A3 114 aa6.47□□□□□ -1.37
SDCCAG3-208ENST00000466579 C9JQL5 133 aa6.47□□□□□ -1.37
SDCCAG3-208ENST00000466579 SIVA1O15304 175 aa6.47□□□□□ -1.37
SDCCAG3-208ENST00000466579 LINC00315P59091 139 aa6.47□□□□□ -1.37
SDCCAG3-208ENST00000466579 RAB4BP61018 213 aa6.47□□□□□ -1.37
SDCCAG3-208ENST00000466579 CACNG7P62955 275 aa6.47□□□□□ -1.37
SDCCAG3-208ENST00000466579 FAM74A3Q4VXF1 159 aa6.47□□□□□ -1.37
SDCCAG3-208ENST00000466579 CT83Q5H943 113 aa6.47□□□□□ -1.37
SDCCAG3-208ENST00000466579 SPANXN1Q5VSR9 72 aa6.47□□□□□ -1.37
SDCCAG3-208ENST00000466579 LINC01551Q86U37 167 aa6.47□□□□□ -1.37
SDCCAG3-208ENST00000466579 C14orf178Q8N769 122 aaPredicted RBP6.47□□□□□ -1.37
SDCCAG3-208ENST00000466579 SMIM7Q9BQ49 75 aa6.47□□□□□ -1.37
SDCCAG3-208ENST00000466579 RNASE7Q9H1E1 156 aaKnown RBP6.47□□□□□ -1.37
SDCCAG3-208ENST00000466579 RPP21Q9H633 154 aaKnown RBP6.47□□□□□ -1.37
SDCCAG3-208ENST00000466579 Q9UF83 564 aa6.47□□□□□ -1.37
SDCCAG3-208ENST00000466579 PKD1P98161 4303 aa6.46□□□□□ -1.37
SDCCAG3-208ENST00000466579 ZNF727A8MUV8 499 aa6.46□□□□□ -1.38
SDCCAG3-208ENST00000466579 K7EP13 123 aa6.46□□□□□ -1.38
SDCCAG3-208ENST00000466579 DNAH10OSP0CZ25 163 aa6.46□□□□□ -1.38
SDCCAG3-208ENST00000466579 FOXA3P55318 350 aaPredicted RBP6.46□□□□□ -1.38
SDCCAG3-208ENST00000466579 SRSF3P84103 164 aaKnown RBP6.46□□□□□ -1.38
SDCCAG3-208ENST00000466579 PEA15Q15121 130 aa6.46□□□□□ -1.38
SDCCAG3-208ENST00000466579 C1orf134Q5TEV5 83 aa6.46□□□□□ -1.38
SDCCAG3-208ENST00000466579 FAM74A4Q5TZK3 123 aa6.46□□□□□ -1.38
SDCCAG3-208ENST00000466579 LYZL1Q6UWQ5 148 aa6.46□□□□□ -1.38
SDCCAG3-208ENST00000466579 OR10G8Q8NGN5 311 aa6.46□□□□□ -1.38
SDCCAG3-208ENST00000466579 GTSF1LQ9H1H1 148 aa6.46□□□□□ -1.38
SDCCAG3-208ENST00000466579 DNAH11Q96DT5 4516 aa6.46□□□□□ -1.38
SDCCAG3-208ENST00000466579 MUC21A0A0G2JKD1 596 aa6.45□□□□□ -1.38
SDCCAG3-208ENST00000466579 MUC21A0A140T8X8 626 aa6.45□□□□□ -1.38
SDCCAG3-208ENST00000466579 A0A1B0GVY2 172 aa6.45□□□□□ -1.38
SDCCAG3-208ENST00000466579 SOHLH1Q5JUK2 328 aa6.45□□□□□ -1.38
SDCCAG3-208ENST00000466579 LELP1Q5T871 98 aa6.45□□□□□ -1.38
SDCCAG3-208ENST00000466579 C6orf223Q8N319 242 aa6.45□□□□□ -1.38
SDCCAG3-208ENST00000466579 ATP6V0E2Q8NHE4 81 aa6.45□□□□□ -1.38
SDCCAG3-208ENST00000466579 GTSF1Q8WW33 167 aa6.45□□□□□ -1.38
SDCCAG3-208ENST00000466579 AP1S3Q96PC3 154 aa6.45□□□□□ -1.38
SDCCAG3-208ENST00000466579 OSTCQ9NRP0 149 aa6.45□□□□□ -1.38
SDCCAG3-208ENST00000466579 MSRB1Q9NZV6 116 aa6.45□□□□□ -1.38
SDCCAG3-208ENST00000466579 PKHD1P08F94 4074 aa6.45□□□□□ -1.38
SDCCAG3-208ENST00000466579 GAGE12JA6NER3 117 aa6.44□□□□□ -1.38
SDCCAG3-208ENST00000466579 GATCO43716 136 aaKnown RBP6.44□□□□□ -1.38
SDCCAG3-208ENST00000466579 CEBPGP53567 150 aa6.44□□□□□ -1.38
SDCCAG3-208ENST00000466579 UBE2D3P61077 147 aa6.44□□□□□ -1.38
SDCCAG3-208ENST00000466579 UBE2D2P62837 147 aa6.44□□□□□ -1.38
SDCCAG3-208ENST00000466579 GAGE1Q13065 139 aa6.44□□□□□ -1.38
SDCCAG3-208ENST00000466579 GAGE4Q13068 117 aa6.44□□□□□ -1.38
SDCCAG3-208ENST00000466579 GAGE5Q13069 117 aa6.44□□□□□ -1.38
SDCCAG3-208ENST00000466579 TMEM241Q24JQ0 296 aa6.44□□□□□ -1.38
SDCCAG3-208ENST00000466579 GAGE13Q4V321 117 aa6.44□□□□□ -1.38
SDCCAG3-208ENST00000466579 WFDC10BQ8IUB3 73 aa6.44□□□□□ -1.38
SDCCAG3-208ENST00000466579 GFRA4Q9GZZ7 299 aa6.44□□□□□ -1.38
SDCCAG3-208ENST00000466579 DYNC1H1Q14204 4646 aaKnown RBP6.43□□□□□ -1.38
SDCCAG3-208ENST00000466579 TRBV7-3A0A075B6L6 115 aa6.43□□□□□ -1.38
SDCCAG3-208ENST00000466579 FAM231BA6NCW3 169 aa6.43□□□□□ -1.38
SDCCAG3-208ENST00000466579 A8MWL6 223 aa6.43□□□□□ -1.38
SDCCAG3-208ENST00000466579 TRGC1P0CF51 173 aa6.43□□□□□ -1.38
SDCCAG3-208ENST00000466579 NTF3P20783 257 aa6.43□□□□□ -1.38
SDCCAG3-208ENST00000466579 ERVFC1-1P60608 527 aa6.43□□□□□ -1.38
SDCCAG3-208ENST00000466579 RPL23P62829 140 aaKnown RBP6.43□□□□□ -1.38
SDCCAG3-208ENST00000466579 IFITM2Q01629 132 aa6.43□□□□□ -1.38
SDCCAG3-208ENST00000466579 LINC01556Q5JQF7 62 aa6.43□□□□□ -1.38
SDCCAG3-208ENST00000466579 CLLU1Q5K131 121 aa6.43□□□□□ -1.38
SDCCAG3-208ENST00000466579 Q6ZRN7 208 aaPredicted RBP6.43□□□□□ -1.38
SDCCAG3-208ENST00000466579 NEXN-AS1Q8NBZ9 246 aa6.43□□□□□ -1.38
SDCCAG3-208ENST00000466579 ISOC2Q96AB3 205 aa6.43□□□□□ -1.38
SDCCAG3-208ENST00000466579 TPPP3Q9BW30 176 aa6.43□□□□□ -1.38
SDCCAG3-208ENST00000466579 A0A087WWC5 75 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms