RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 PRO0255Q9UI72 69 aa11.83□□□□□ -0.52
VPS52-215ENST00000464425 LINC00588Q9Y4M8 146 aa11.83□□□□□ -0.52
VPS52-215ENST00000464425 V9GYV3 84 aa11.83□□□□□ -0.52
VPS52-215ENST00000464425 DNAH10Q8IVF4 4471 aa11.82□□□□□ -0.52
VPS52-215ENST00000464425 A0A096LPF7 62 aa11.82□□□□□ -0.52
VPS52-215ENST00000464425 A8MWV9 139 aa11.82□□□□□ -0.52
VPS52-215ENST00000464425 RS1O15537 224 aa11.82□□□□□ -0.52
VPS52-215ENST00000464425 CRYBA4P53673 196 aa11.82□□□□□ -0.52
VPS52-215ENST00000464425 SLAQ13239 276 aa11.82□□□□□ -0.52
VPS52-215ENST00000464425 OR10AG1Q8NH19 301 aa11.82□□□□□ -0.52
VPS52-215ENST00000464425 TSKUQ8WUA8 353 aa11.82□□□□□ -0.52
VPS52-215ENST00000464425 M0R381 172 aa11.81□□□□□ -0.52
VPS52-215ENST00000464425 CTRLP40313 264 aa11.81□□□□□ -0.52
VPS52-215ENST00000464425 CACNG7P62955 275 aa11.81□□□□□ -0.52
VPS52-215ENST00000464425 ESRGQ1W209 222 aa11.81□□□□□ -0.52
VPS52-215ENST00000464425 SPANXN1Q5VSR9 72 aa11.81□□□□□ -0.52
VPS52-215ENST00000464425 CFAP126Q5VTH2 177 aa11.81□□□□□ -0.52
VPS52-215ENST00000464425 LYZL1Q6UWQ5 148 aa11.81□□□□□ -0.52
VPS52-215ENST00000464425 GTSF1Q8WW33 167 aa11.81□□□□□ -0.52
VPS52-215ENST00000464425 TPPP3Q9BW30 176 aa11.81□□□□□ -0.52
VPS52-215ENST00000464425 CNFNQ9BYD5 112 aa11.81□□□□□ -0.52
VPS52-215ENST00000464425 PPP1R2P9O14990 202 aa11.8□□□□□ -0.52
VPS52-215ENST00000464425 FAM3BP58499 235 aaPredicted RBP11.8□□□□□ -0.52
VPS52-215ENST00000464425 ZFP2Q6ZN57 461 aa11.8□□□□□ -0.52
VPS52-215ENST00000464425 ZNRF2Q8NHG8 242 aa11.79□□□□□ -0.52
VPS52-215ENST00000464425 ANAPC16Q96DE5 110 aa11.79□□□□□ -0.52
VPS52-215ENST00000464425 CARHSP1Q9Y2V2 147 aaKnown RBP11.79□□□□□ -0.52
VPS52-215ENST00000464425 ICOSQ9Y6W8 199 aa11.79□□□□□ -0.52
VPS52-215ENST00000464425 EPPK1P58107 5090 aaKnown RBP11.79□□□□□ -0.52
VPS52-215ENST00000464425 IGHV3-73A0A0B4J1V6 119 aa11.78□□□□□ -0.52
VPS52-215ENST00000464425 MT-ND4LP03901 98 aa11.78□□□□□ -0.52
VPS52-215ENST00000464425 NDUFA5Q16718 116 aa11.78□□□□□ -0.52
VPS52-215ENST00000464425 UFSP1Q6NVU6 142 aa11.78□□□□□ -0.52
VPS52-215ENST00000464425 MUC21A0A0G2JKD1 596 aa11.77□□□□□ -0.53
VPS52-215ENST00000464425 MUC21A0A140T8X8 626 aa11.77□□□□□ -0.53
VPS52-215ENST00000464425 SMIM27A0A1W2PRY6 76 aa11.77□□□□□ -0.53
VPS52-215ENST00000464425 HIGD1CA8MV81 97 aa11.77□□□□□ -0.53
VPS52-215ENST00000464425 NTF3P20783 257 aa11.77□□□□□ -0.53
VPS52-215ENST00000464425 JPT2Q9H910 190 aa11.77□□□□□ -0.53
VPS52-215ENST00000464425 K7EQD1 137 aa11.76□□□□□ -0.53
VPS52-215ENST00000464425 RHODO00212 210 aa11.76□□□□□ -0.53
VPS52-215ENST00000464425 CRYGDP07320 174 aa11.76□□□□□ -0.53
VPS52-215ENST00000464425 GYPEP15421 78 aa11.76□□□□□ -0.53
VPS52-215ENST00000464425 MRPL23Q16540 153 aaKnown RBP11.76□□□□□ -0.53
VPS52-215ENST00000464425 Q6ZR54 194 aa11.76□□□□□ -0.53
VPS52-215ENST00000464425 PGLYRP4Q96LB8 373 aa11.76□□□□□ -0.53
VPS52-215ENST00000464425 NAT8BQ9UHF3 227 aa11.76□□□□□ -0.53
VPS52-215ENST00000464425 FRAS1Q86XX4 4008 aa11.76□□□□□ -0.53
VPS52-215ENST00000464425 DNAH2Q9P225 4427 aa11.76□□□□□ -0.53
VPS52-215ENST00000464425 GATA1P15976 413 aaPredicted RBP11.75□□□□□ -0.53
VPS52-215ENST00000464425 SSTP61278 116 aa11.75□□□□□ -0.53
VPS52-215ENST00000464425 BORCS7Q96B45 105 aa11.75□□□□□ -0.53
VPS52-215ENST00000464425 SAMD10Q9BYL1 202 aa11.75□□□□□ -0.53
VPS52-215ENST00000464425 Q9H8V8 135 aa11.75□□□□□ -0.53
VPS52-215ENST00000464425 MSRB1Q9NZV6 116 aa11.75□□□□□ -0.53
VPS52-215ENST00000464425 LOC100131303A0A0U1RQF7 123 aa11.74□□□□□ -0.53
VPS52-215ENST00000464425 TRBV6-4A0A1B0GX49 114 aa11.74□□□□□ -0.53
VPS52-215ENST00000464425 SRIP30626 198 aa11.74□□□□□ -0.53
VPS52-215ENST00000464425 TWIST1Q15672 202 aa11.74□□□□□ -0.53
VPS52-215ENST00000464425 SLC7A5P1Q8MH63 180 aa11.74□□□□□ -0.53
VPS52-215ENST00000464425 NUP35Q8NFH5 326 aa11.74□□□□□ -0.53
VPS52-215ENST00000464425 AP1S3Q96PC3 154 aa11.74□□□□□ -0.53
VPS52-215ENST00000464425 MRPS16Q9Y3D3 137 aaKnown RBP11.74□□□□□ -0.53
VPS52-215ENST00000464425 A0A087WWL8 130 aa11.73□□□□□ -0.53
VPS52-215ENST00000464425 NBDYA0A0U1RRE5 68 aa11.73□□□□□ -0.53
VPS52-215ENST00000464425 A0A1B0GUT8 65 aa11.73□□□□□ -0.53
VPS52-215ENST00000464425 TRGC1P0CF51 173 aa11.73□□□□□ -0.53
VPS52-215ENST00000464425 NEGR1Q7Z3B1 354 aa11.73□□□□□ -0.53
VPS52-215ENST00000464425 C14orf178Q8N769 122 aaPredicted RBP11.73□□□□□ -0.53
VPS52-215ENST00000464425 SLC25A29Q8N8R3 303 aa11.73□□□□□ -0.53
VPS52-215ENST00000464425 CTDSP1Q9GZU7 261 aa11.73□□□□□ -0.53
VPS52-215ENST00000464425 KIF25-AS1Q9Y6Z4 181 aa11.73□□□□□ -0.53
VPS52-215ENST00000464425 SMIM17P0DL12 118 aa11.72□□□□□ -0.53
VPS52-215ENST00000464425 FAM74A4Q5TZK3 123 aa11.72□□□□□ -0.53
VPS52-215ENST00000464425 LYPD5Q6UWN5 251 aa11.72□□□□□ -0.53
VPS52-215ENST00000464425 CLRN3Q8NCR9 226 aa11.72□□□□□ -0.53
VPS52-215ENST00000464425 UPK3BQ9BT76 320 aa11.72□□□□□ -0.53
VPS52-215ENST00000464425 TMEM242Q9NWH2 141 aa11.72□□□□□ -0.53
VPS52-215ENST00000464425 LINC00315P59091 139 aa11.71□□□□□ -0.53
VPS52-215ENST00000464425 RAB4BP61018 213 aa11.71□□□□□ -0.53
VPS52-215ENST00000464425 RHEBQ15382 184 aa11.71□□□□□ -0.53
VPS52-215ENST00000464425 Q6ZSN1 163 aa11.71□□□□□ -0.53
VPS52-215ENST00000464425 IMMP2LQ96T52 175 aa11.71□□□□□ -0.53
VPS52-215ENST00000464425 A0A087WWC5 75 aa11.7□□□□□ -0.54
VPS52-215ENST00000464425 RTL8CO15255 209 aa11.7□□□□□ -0.54
VPS52-215ENST00000464425 APOC3P02656 99 aa11.7□□□□□ -0.54
VPS52-215ENST00000464425 EVI2AP22794 236 aa11.7□□□□□ -0.54
VPS52-215ENST00000464425 RIGQ13278 110 aa11.7□□□□□ -0.54
VPS52-215ENST00000464425 C1orf134Q5TEV5 83 aa11.7□□□□□ -0.54
VPS52-215ENST00000464425 SVBPQ8N300 66 aa11.7□□□□□ -0.54
VPS52-215ENST00000464425 PRADC1Q9BSG0 188 aa11.7□□□□□ -0.54
VPS52-215ENST00000464425 DPH3P1Q9H4G8 78 aa11.7□□□□□ -0.54
VPS52-215ENST00000464425 A0A1B0GW15 77 aa11.69□□□□□ -0.54
VPS52-215ENST00000464425 C7orf77A4D0Y5 90 aa11.69□□□□□ -0.54
VPS52-215ENST00000464425 RHOHQ15669 191 aa11.69□□□□□ -0.54
VPS52-215ENST00000464425 SMIM15Q7Z3B0 74 aa11.69□□□□□ -0.54
VPS52-215ENST00000464425 SNAPINO95295 136 aa11.68□□□□□ -0.54
VPS52-215ENST00000464425 FAT2Q9NYQ8 4349 aa11.68□□□□□ -0.54
VPS52-215ENST00000464425 ZNF56Q15929 161 aa11.67□□□□□ -0.54
VPS52-215ENST00000464425 LINC00336Q6ZUF6 198 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms