RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	BCL2	P10415	239 aa		7.33	□□□□□ -1.24
PTPN7-204	ENST00000462815	SUMO1	P63165	101 aa	Known RBP	7.33	□□□□□ -1.24
PTPN7-204	ENST00000462815	SRSF3	P84103	164 aa	Known RBP	7.33	□□□□□ -1.24
PTPN7-204	ENST00000462815	ZNF506	Q5JVG8	444 aa		7.33	□□□□□ -1.24
PTPN7-204	ENST00000462815	UFSP1	Q6NVU6	142 aa		7.33	□□□□□ -1.24
PTPN7-204	ENST00000462815	TMEM75	Q8N9X5	138 aa		7.33	□□□□□ -1.24
PTPN7-204	ENST00000462815	DEFB104A	Q8WTQ1	72 aa		7.33	□□□□□ -1.24
PTPN7-204	ENST00000462815	KCNS1	Q96KK3	526 aa		7.33	□□□□□ -1.24
PTPN7-204	ENST00000462815	PRADC1	Q9BSG0	188 aa		7.33	□□□□□ -1.24
PTPN7-204	ENST00000462815	RPH3AL	Q9UNE2	315 aa		7.33	□□□□□ -1.24
PTPN7-204	ENST00000462815	LECT2	O14960	151 aa		7.32	□□□□□ -1.24
PTPN7-204	ENST00000462815	IFNA1	P01562	189 aa		7.32	□□□□□ -1.24
PTPN7-204	ENST00000462815	LINC01620	Q4KN68	170 aa		7.32	□□□□□ -1.24
PTPN7-204	ENST00000462815	CST9LP1	Q5W188	147 aa		7.32	□□□□□ -1.24
PTPN7-204	ENST00000462815	DAZ4	Q86SG3	579 aa	Known RBP	7.32	□□□□□ -1.24
PTPN7-204	ENST00000462815	ATP6V0E2	Q8NHE4	81 aa		7.32	□□□□□ -1.24
PTPN7-204	ENST00000462815	DNAJC30	Q96LL9	226 aa		7.32	□□□□□ -1.24
PTPN7-204	ENST00000462815	SGK494	Q96LW2	274 aa		7.32	□□□□□ -1.24
PTPN7-204	ENST00000462815	NKX6-2	Q9C056	277 aa	Predicted RBP	7.32	□□□□□ -1.24
PTPN7-204	ENST00000462815	DAZ3	Q9NR90	486 aa	Known RBP	7.32	□□□□□ -1.24
PTPN7-204	ENST00000462815	VAX2	Q9UIW0	290 aa		7.32	□□□□□ -1.24
PTPN7-204	ENST00000462815	RAB19	A4D1S5	217 aa		7.31	□□□□□ -1.24
PTPN7-204	ENST00000462815		C9JQL5	133 aa		7.31	□□□□□ -1.24
PTPN7-204	ENST00000462815	NDUFS6	O75380	124 aa	Known RBP	7.31	□□□□□ -1.24
PTPN7-204	ENST00000462815	MGST1	P10620	155 aa	Known RBP	7.31	□□□□□ -1.24
PTPN7-204	ENST00000462815	TAGLN2	P37802	199 aa	Known RBP	7.31	□□□□□ -1.24
PTPN7-204	ENST00000462815	MEF2B	Q02080	365 aa	Predicted RBP	7.31	□□□□□ -1.24
PTPN7-204	ENST00000462815	TOR2A	Q5JU69	321 aa		7.31	□□□□□ -1.24
PTPN7-204	ENST00000462815	SERTAD4-AS1	Q5TG53	156 aa		7.31	□□□□□ -1.24
PTPN7-204	ENST00000462815	SYT8	Q8NBV8	401 aa		7.31	□□□□□ -1.24
PTPN7-204	ENST00000462815	CMTM2	Q8TAZ6	248 aa		7.31	□□□□□ -1.24
PTPN7-204	ENST00000462815	LINC00479	Q96M42	142 aa		7.31	□□□□□ -1.24
PTPN7-204	ENST00000462815	TM2D2	Q9BX73	214 aa		7.31	□□□□□ -1.24
PTPN7-204	ENST00000462815	PARL	Q9H300	379 aa		7.31	□□□□□ -1.24
PTPN7-204	ENST00000462815	EPDR1	Q9UM22	224 aa		7.31	□□□□□ -1.24
PTPN7-204	ENST00000462815	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	7.3	□□□□□ -1.24
PTPN7-204	ENST00000462815	TCRA	P04437	139 aa		7.3	□□□□□ -1.24
PTPN7-204	ENST00000462815	SRP19	P09132	144 aa	Known RBP	7.3	□□□□□ -1.24
PTPN7-204	ENST00000462815	C5orf17	Q8NAS9	161 aa		7.3	□□□□□ -1.24
PTPN7-204	ENST00000462815	EIF5A2	Q9GZV4	153 aa	Known RBP	7.3	□□□□□ -1.24
PTPN7-204	ENST00000462815	SMDT1	Q9H4I9	107 aa		7.3	□□□□□ -1.24
PTPN7-204	ENST00000462815	TRAV8-3	A0A0A6YYJ7	113 aa		7.29	□□□□□ -1.24
PTPN7-204	ENST00000462815	SERTM2	A0A1B0GWG4	89 aa		7.29	□□□□□ -1.24
PTPN7-204	ENST00000462815	GCG	P01275	180 aa		7.29	□□□□□ -1.24
PTPN7-204	ENST00000462815	PEA15	Q15121	130 aa		7.29	□□□□□ -1.24
PTPN7-204	ENST00000462815	PIK3CD-AS1	Q5SR53	167 aa		7.29	□□□□□ -1.24
PTPN7-204	ENST00000462815	ZFP2	Q6ZN57	461 aa		7.29	□□□□□ -1.24
PTPN7-204	ENST00000462815	COMMD7	Q86VX2	200 aa		7.29	□□□□□ -1.24
PTPN7-204	ENST00000462815	CIRBP-AS1	Q8TBR5	109 aa		7.29	□□□□□ -1.24
PTPN7-204	ENST00000462815	BAALC	Q8WXS3	180 aa		7.29	□□□□□ -1.24
PTPN7-204	ENST00000462815	C11orf52	Q96A22	123 aa		7.29	□□□□□ -1.24
PTPN7-204	ENST00000462815	TCEAL7	Q9BRU2	100 aa		7.29	□□□□□ -1.24
PTPN7-204	ENST00000462815	CHAC1	Q9BUX1	264 aa		7.29	□□□□□ -1.24
PTPN7-204	ENST00000462815	PSG8	Q9UQ74	426 aa		7.29	□□□□□ -1.24
PTPN7-204	ENST00000462815	IGKV3D-20	A0A0C4DH25	116 aa		7.28	□□□□□ -1.24
PTPN7-204	ENST00000462815	SCO2	A0A1W2PP80	73 aa		7.28	□□□□□ -1.24
PTPN7-204	ENST00000462815	GAGE12J	A6NER3	117 aa		7.28	□□□□□ -1.24
PTPN7-204	ENST00000462815	PEX7	O00628	323 aa		7.28	□□□□□ -1.24
PTPN7-204	ENST00000462815	GAGE1	Q13065	139 aa		7.28	□□□□□ -1.24
PTPN7-204	ENST00000462815	GAGE4	Q13068	117 aa		7.28	□□□□□ -1.24
PTPN7-204	ENST00000462815	GAGE5	Q13069	117 aa		7.28	□□□□□ -1.24
PTPN7-204	ENST00000462815	GAGE13	Q4V321	117 aa		7.28	□□□□□ -1.24
PTPN7-204	ENST00000462815	SLC7A5P1	Q8MH63	180 aa		7.28	□□□□□ -1.24
PTPN7-204	ENST00000462815	C14orf178	Q8N769	122 aa	Predicted RBP	7.28	□□□□□ -1.24
PTPN7-204	ENST00000462815	HIST1H2BA	Q96A08	127 aa		7.28	□□□□□ -1.24
PTPN7-204	ENST00000462815	SAMD10	Q9BYL1	202 aa		7.28	□□□□□ -1.24
PTPN7-204	ENST00000462815	JPT2	Q9H910	190 aa		7.28	□□□□□ -1.24
PTPN7-204	ENST00000462815	TMEM250	H0YL14	139 aa		7.27	□□□□□ -1.25
PTPN7-204	ENST00000462815	PDE6D	O43924	150 aa		7.27	□□□□□ -1.25
PTPN7-204	ENST00000462815	OXT	P01178	125 aa		7.27	□□□□□ -1.25
PTPN7-204	ENST00000462815	ATRAID	Q6UW56	229 aa		7.27	□□□□□ -1.25
PTPN7-204	ENST00000462815	UQCC3	Q6UW78	93 aa		7.27	□□□□□ -1.25
PTPN7-204	ENST00000462815	NIT1	Q86X76	327 aa		7.27	□□□□□ -1.25
PTPN7-204	ENST00000462815	CYB561D1	Q8N8Q1	229 aa		7.27	□□□□□ -1.25
PTPN7-204	ENST00000462815	TNXB	P22105	4242 aa		7.27	□□□□□ -1.25
PTPN7-204	ENST00000462815	TRBV6-1	A0A0K0K1D8	114 aa		7.26	□□□□□ -1.25
PTPN7-204	ENST00000462815	FLI1	Q01543	452 aa	Predicted RBP	7.26	□□□□□ -1.25
PTPN7-204	ENST00000462815	SMUG1	Q53HV7	270 aa		7.26	□□□□□ -1.25
PTPN7-204	ENST00000462815	NDFIP1	Q9BT67	221 aa		7.26	□□□□□ -1.25
PTPN7-204	ENST00000462815	DERL1	Q9BUN8	251 aa		7.26	□□□□□ -1.25
PTPN7-204	ENST00000462815	PLA2G2D	Q9UNK4	145 aa		7.26	□□□□□ -1.25
PTPN7-204	ENST00000462815	RNF213	Q63HN8	5207 aa		7.26	□□□□□ -1.25
PTPN7-204	ENST00000462815	LRP2	P98164	4655 aa		7.26	□□□□□ -1.25
PTPN7-204	ENST00000462815	TRAV34	A0A0B4J273	112 aa		7.25	□□□□□ -1.25
PTPN7-204	ENST00000462815		A8MWV9	139 aa		7.25	□□□□□ -1.25
PTPN7-204	ENST00000462815	IGLV2-8	P01709	118 aa		7.25	□□□□□ -1.25
PTPN7-204	ENST00000462815	HNRNPA3	P51991	378 aa	Known RBP	7.25	□□□□□ -1.25
PTPN7-204	ENST00000462815	NDUFA5	Q16718	116 aa		7.25	□□□□□ -1.25
PTPN7-204	ENST00000462815	COX11	Q9Y6N1	276 aa		7.25	□□□□□ -1.25
PTPN7-204	ENST00000462815		A0A087WWC5	75 aa		7.24	□□□□□ -1.25
PTPN7-204	ENST00000462815	TMEM218	A2RU14	115 aa		7.24	□□□□□ -1.25
PTPN7-204	ENST00000462815	S100A9	P06702	114 aa	Known RBP	7.24	□□□□□ -1.25
PTPN7-204	ENST00000462815	AKR1C3	P42330	323 aa		7.24	□□□□□ -1.25
PTPN7-204	ENST00000462815	RPL35	P42766	123 aa	Known RBP	7.24	□□□□□ -1.25
PTPN7-204	ENST00000462815	CRIP1	P50238	77 aa		7.24	□□□□□ -1.25
PTPN7-204	ENST00000462815	DNLZ	Q5SXM8	178 aa		7.24	□□□□□ -1.25
PTPN7-204	ENST00000462815	DMRTA1	Q5VZB9	504 aa		7.24	□□□□□ -1.25
PTPN7-204	ENST00000462815	PRNT	Q86SH4	94 aa		7.24	□□□□□ -1.25
PTPN7-204	ENST00000462815		Q8N976	141 aa		7.24	□□□□□ -1.25
PTPN7-204	ENST00000462815	IL36B	Q9NZH7	164 aa		7.24	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms