RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 MUC21A0A140T8X8 626 aa10.84□□□□□ -0.67
ERCC3-206ENST00000462306 SIVA1O15304 175 aa10.84□□□□□ -0.67
ERCC3-206ENST00000462306 P01737 135 aa10.84□□□□□ -0.67
ERCC3-206ENST00000462306 IGLC6P0CF74 106 aa10.84□□□□□ -0.67
ERCC3-206ENST00000462306 TIRAPP58753 221 aa10.84□□□□□ -0.67
ERCC3-206ENST00000462306 RPS20P60866 119 aaKnown RBP10.84□□□□□ -0.67
ERCC3-206ENST00000462306 FAM74A4Q5TZK3 123 aa10.84□□□□□ -0.67
ERCC3-206ENST00000462306 C14orf178Q8N769 122 aaPredicted RBP10.84□□□□□ -0.67
ERCC3-206ENST00000462306 NUDT10Q8NFP7 164 aa10.84□□□□□ -0.67
ERCC3-206ENST00000462306 NUDT11Q96G61 164 aa10.84□□□□□ -0.67
ERCC3-206ENST00000462306 Q9UF83 564 aa10.84□□□□□ -0.67
ERCC3-206ENST00000462306 A0A1W2PPQ1 181 aa10.83□□□□□ -0.68
ERCC3-206ENST00000462306 LINC00694P0DN24 101 aa10.83□□□□□ -0.68
ERCC3-206ENST00000462306 TTC32Q5I0X7 151 aa10.83□□□□□ -0.68
ERCC3-206ENST00000462306 SRP19P09132 144 aaKnown RBP10.82□□□□□ -0.68
ERCC3-206ENST00000462306 CEBPGP53567 150 aa10.82□□□□□ -0.68
ERCC3-206ENST00000462306 SOHLH1Q5JUK2 328 aa10.82□□□□□ -0.68
ERCC3-206ENST00000462306 SPANXN1Q5VSR9 72 aa10.82□□□□□ -0.68
ERCC3-206ENST00000462306 C6orf223Q8N319 242 aa10.82□□□□□ -0.68
ERCC3-206ENST00000462306 FER1L6-AS1Q8NA97 138 aa10.82□□□□□ -0.68
ERCC3-206ENST00000462306 BIRC6Q9NR09 4857 aa10.82□□□□□ -0.68
ERCC3-206ENST00000462306 XKRY2A2RUG3 117 aa10.81□□□□□ -0.68
ERCC3-206ENST00000462306 PRSS29PA6NIE9 313 aa10.81□□□□□ -0.68
ERCC3-206ENST00000462306 WFDC10BQ8IUB3 73 aa10.81□□□□□ -0.68
ERCC3-206ENST00000462306 ATP6V0E2Q8NHE4 81 aa10.81□□□□□ -0.68
ERCC3-206ENST00000462306 RNASE7Q9H1E1 156 aaKnown RBP10.81□□□□□ -0.68
ERCC3-206ENST00000462306 A0A1B0GVY2 172 aa10.8□□□□□ -0.68
ERCC3-206ENST00000462306 GAGE12JA6NER3 117 aa10.8□□□□□ -0.68
ERCC3-206ENST00000462306 SSTP61278 116 aa10.8□□□□□ -0.68
ERCC3-206ENST00000462306 GAGE1Q13065 139 aa10.8□□□□□ -0.68
ERCC3-206ENST00000462306 GAGE4Q13068 117 aa10.8□□□□□ -0.68
ERCC3-206ENST00000462306 GAGE5Q13069 117 aa10.8□□□□□ -0.68
ERCC3-206ENST00000462306 GAGE13Q4V321 117 aa10.8□□□□□ -0.68
ERCC3-206ENST00000462306 TPPP3Q9BW30 176 aa10.8□□□□□ -0.68
ERCC3-206ENST00000462306 LY96Q9Y6Y9 160 aa10.8□□□□□ -0.68
ERCC3-206ENST00000462306 KIF25-AS1Q9Y6Z4 181 aa10.8□□□□□ -0.68
ERCC3-206ENST00000462306 HECTD4Q9Y4D8 3996 aa10.8□□□□□ -0.68
ERCC3-206ENST00000462306 SMIM7Q9BQ49 75 aa10.79□□□□□ -0.68
ERCC3-206ENST00000462306 GTSF1LQ9H1H1 148 aa10.79□□□□□ -0.68
ERCC3-206ENST00000462306 RPP21Q9H633 154 aaKnown RBP10.79□□□□□ -0.68
ERCC3-206ENST00000462306 MSRB1Q9NZV6 116 aa10.79□□□□□ -0.68
ERCC3-206ENST00000462306 C9JQL5 133 aa10.78□□□□□ -0.68
ERCC3-206ENST00000462306 F2Z2F3 143 aa10.78□□□□□ -0.68
ERCC3-206ENST00000462306 DNAH10OSP0CZ25 163 aa10.78□□□□□ -0.68
ERCC3-206ENST00000462306 LINC00315P59091 139 aa10.78□□□□□ -0.68
ERCC3-206ENST00000462306 RAB4BP61018 213 aa10.78□□□□□ -0.68
ERCC3-206ENST00000462306 LYZL1Q6UWQ5 148 aa10.78□□□□□ -0.68
ERCC3-206ENST00000462306 FAM231DQ6ZW35 169 aa10.78□□□□□ -0.68
ERCC3-206ENST00000462306 TRBV10-1A0A0K0K1A3 114 aa10.77□□□□□ -0.69
ERCC3-206ENST00000462306 ZNF727A8MUV8 499 aa10.77□□□□□ -0.69
ERCC3-206ENST00000462306 BTF3P20290 206 aaKnown RBP10.77□□□□□ -0.69
ERCC3-206ENST00000462306 CTRLP40313 264 aa10.77□□□□□ -0.69
ERCC3-206ENST00000462306 CACNG7P62955 275 aa10.77□□□□□ -0.69
ERCC3-206ENST00000462306 SRSF3P84103 164 aaKnown RBP10.77□□□□□ -0.69
ERCC3-206ENST00000462306 LELP1Q5T871 98 aa10.77□□□□□ -0.69
ERCC3-206ENST00000462306 LINC01551Q86U37 167 aa10.77□□□□□ -0.69
ERCC3-206ENST00000462306 AP1S3Q96PC3 154 aa10.77□□□□□ -0.69
ERCC3-206ENST00000462306 ZNF56Q15929 161 aa10.76□□□□□ -0.69
ERCC3-206ENST00000462306 GATCO43716 136 aaKnown RBP10.75□□□□□ -0.69
ERCC3-206ENST00000462306 TNP2Q05952 138 aa10.75□□□□□ -0.69
ERCC3-206ENST00000462306 WDR73Q6P4I2 378 aa10.75□□□□□ -0.69
ERCC3-206ENST00000462306 OR10G8Q8NGN5 311 aa10.75□□□□□ -0.69
ERCC3-206ENST00000462306 GTSF1Q8WW33 167 aa10.75□□□□□ -0.69
ERCC3-206ENST00000462306 CNFNQ9BYD5 112 aa10.75□□□□□ -0.69
ERCC3-206ENST00000462306 TRAV8-6A0A0B4J262 113 aa10.74□□□□□ -0.69
ERCC3-206ENST00000462306 IGHV3-38A0A0C4DH36 116 aa10.74□□□□□ -0.69
ERCC3-206ENST00000462306 K7EP13 123 aa10.74□□□□□ -0.69
ERCC3-206ENST00000462306 SMIM17P0DL12 118 aa10.74□□□□□ -0.69
ERCC3-206ENST00000462306 NTF3P20783 257 aa10.74□□□□□ -0.69
ERCC3-206ENST00000462306 EVI2AP22794 236 aa10.74□□□□□ -0.69
ERCC3-206ENST00000462306 ERVFC1-1P60608 527 aa10.74□□□□□ -0.69
ERCC3-206ENST00000462306 PEA15Q15121 130 aa10.74□□□□□ -0.69
ERCC3-206ENST00000462306 OR10J3Q5JRS4 329 aa10.74□□□□□ -0.69
ERCC3-206ENST00000462306 SMDT1Q9H4I9 107 aa10.74□□□□□ -0.69
ERCC3-206ENST00000462306 PKD1P98161 4303 aa10.74□□□□□ -0.69
ERCC3-206ENST00000462306 TRBV7-3A0A075B6L6 115 aa10.73□□□□□ -0.69
ERCC3-206ENST00000462306 TRAV9-2A0A087WT02 112 aa10.73□□□□□ -0.69
ERCC3-206ENST00000462306 F5H697 171 aa10.73□□□□□ -0.69
ERCC3-206ENST00000462306 UBE2D3P61077 147 aa10.73□□□□□ -0.69
ERCC3-206ENST00000462306 UBE2D2P62837 147 aa10.73□□□□□ -0.69
ERCC3-206ENST00000462306 RPL36AP83881 106 aaKnown RBP10.73□□□□□ -0.69
ERCC3-206ENST00000462306 FAM74A3Q4VXF1 159 aa10.73□□□□□ -0.69
ERCC3-206ENST00000462306 CT83Q5H943 113 aa10.73□□□□□ -0.69
ERCC3-206ENST00000462306 LINC01556Q5JQF7 62 aa10.73□□□□□ -0.69
ERCC3-206ENST00000462306 Q6ZRN7 208 aaPredicted RBP10.73□□□□□ -0.69
ERCC3-206ENST00000462306 NEXN-AS1Q8NBZ9 246 aa10.73□□□□□ -0.69
ERCC3-206ENST00000462306 RPL36ALQ969Q0 106 aaKnown RBP10.73□□□□□ -0.69
ERCC3-206ENST00000462306 TNFRSF18Q9Y5U5 241 aa10.73□□□□□ -0.69
ERCC3-206ENST00000462306 A8MWL6 223 aa10.72□□□□□ -0.69
ERCC3-206ENST00000462306 TMEM241Q24JQ0 296 aa10.72□□□□□ -0.69
ERCC3-206ENST00000462306 OSTCQ9NRP0 149 aa10.72□□□□□ -0.69
ERCC3-206ENST00000462306 A0A087WWC5 75 aa10.71□□□□□ -0.69
ERCC3-206ENST00000462306 TRGC1P0CF51 173 aa10.71□□□□□ -0.69
ERCC3-206ENST00000462306 FOXA3P55318 350 aaPredicted RBP10.71□□□□□ -0.69
ERCC3-206ENST00000462306 M0QY20 66 aa10.7□□□□□ -0.7
ERCC3-206ENST00000462306 MGPP08493 103 aa10.7□□□□□ -0.7
ERCC3-206ENST00000462306 RPL23P62829 140 aaKnown RBP10.7□□□□□ -0.7
ERCC3-206ENST00000462306 TWIST1Q15672 202 aa10.7□□□□□ -0.7
ERCC3-206ENST00000462306 C10orf126Q8N4M7 172 aa10.7□□□□□ -0.7
ERCC3-206ENST00000462306 ISOC2Q96AB3 205 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms