RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 PYGO2Q9BRQ0 406 aa11.63□□□□□ -0.55
TOP3A-202ENST00000461127 C7orf71A4D174 169 aa11.62□□□□□ -0.55
TOP3A-202ENST00000461127 K7EN84 100 aa11.62□□□□□ -0.55
TOP3A-202ENST00000461127 PSCAO43653 123 aa11.62□□□□□ -0.55
TOP3A-202ENST00000461127 ZNF324O75467 553 aaPredicted RBP11.62□□□□□ -0.55
TOP3A-202ENST00000461127 S100A1P23297 94 aa11.62□□□□□ -0.55
TOP3A-202ENST00000461127 MRPL23Q16540 153 aaKnown RBP11.62□□□□□ -0.55
TOP3A-202ENST00000461127 LYPD5Q6UWN5 251 aa11.62□□□□□ -0.55
TOP3A-202ENST00000461127 ISOC2Q96AB3 205 aa11.62□□□□□ -0.55
TOP3A-202ENST00000461127 TRGV1A0A0A0MS02 117 aa11.61□□□□□ -0.55
TOP3A-202ENST00000461127 KLLNB2CW77 178 aa11.61□□□□□ -0.55
TOP3A-202ENST00000461127 SH2D1AO60880 128 aa11.61□□□□□ -0.55
TOP3A-202ENST00000461127 SNAPINO95295 136 aa11.61□□□□□ -0.55
TOP3A-202ENST00000461127 BTN1A1Q13410 526 aa11.61□□□□□ -0.55
TOP3A-202ENST00000461127 PRR9Q5T870 116 aa11.61□□□□□ -0.55
TOP3A-202ENST00000461127 LINC00528Q8N1L1 170 aa11.61□□□□□ -0.55
TOP3A-202ENST00000461127 PRO0255Q9UI72 69 aa11.61□□□□□ -0.55
TOP3A-202ENST00000461127 HMCN2Q8NDA2 5059 aa11.61□□□□□ -0.55
TOP3A-202ENST00000461127 TRAV12-3A0A0B4J271 114 aa11.6□□□□□ -0.55
TOP3A-202ENST00000461127 TRAV21A0A0B4J279 112 aa11.6□□□□□ -0.55
TOP3A-202ENST00000461127 FABP5P3A8MUU1 101 aa11.6□□□□□ -0.55
TOP3A-202ENST00000461127 PFN1P07737 140 aaKnown RBP11.6□□□□□ -0.55
TOP3A-202ENST00000461127 ZNF80P51504 273 aaPredicted RBP11.6□□□□□ -0.55
TOP3A-202ENST00000461127 SLAQ13239 276 aa11.6□□□□□ -0.55
TOP3A-202ENST00000461127 NEGR1Q7Z3B1 354 aa11.6□□□□□ -0.55
TOP3A-202ENST00000461127 C10orf126Q8N4M7 172 aa11.6□□□□□ -0.55
TOP3A-202ENST00000461127 C15orf54Q8N8G6 183 aa11.6□□□□□ -0.55
TOP3A-202ENST00000461127 B4DEV8 164 aa11.59□□□□□ -0.55
TOP3A-202ENST00000461127 P01737 135 aa11.59□□□□□ -0.55
TOP3A-202ENST00000461127 MT-ND4LP03901 98 aa11.59□□□□□ -0.55
TOP3A-202ENST00000461127 CRIP1P50238 77 aa11.59□□□□□ -0.55
TOP3A-202ENST00000461127 IBA57Q5T440 356 aaKnown RBP11.59□□□□□ -0.55
TOP3A-202ENST00000461127 Q6AWC8 147 aa11.59□□□□□ -0.55
TOP3A-202ENST00000461127 CLRN3Q8NCR9 226 aa11.59□□□□□ -0.55
TOP3A-202ENST00000461127 SFRP2Q96HF1 295 aa11.59□□□□□ -0.55
TOP3A-202ENST00000461127 GSN-AS1Q9NRJ2 163 aa11.59□□□□□ -0.55
TOP3A-202ENST00000461127 FAM30AQ9NZY2 134 aa11.59□□□□□ -0.55
TOP3A-202ENST00000461127 GATCO43716 136 aaKnown RBP11.58□□□□□ -0.56
TOP3A-202ENST00000461127 CRYGDP07320 174 aa11.58□□□□□ -0.56
TOP3A-202ENST00000461127 FAM231DQ6ZW35 169 aa11.58□□□□□ -0.56
TOP3A-202ENST00000461127 OR10G8Q8NGN5 311 aa11.58□□□□□ -0.56
TOP3A-202ENST00000461127 RNASE7Q9H1E1 156 aaKnown RBP11.58□□□□□ -0.56
TOP3A-202ENST00000461127 OSTCQ9NRP0 149 aa11.58□□□□□ -0.56
TOP3A-202ENST00000461127 NAGKQ9UJ70 344 aa11.58□□□□□ -0.56
TOP3A-202ENST00000461127 PPP1R2P9O14990 202 aa11.57□□□□□ -0.56
TOP3A-202ENST00000461127 OXTP01178 125 aa11.57□□□□□ -0.56
TOP3A-202ENST00000461127 ORM1P02763 201 aa11.57□□□□□ -0.56
TOP3A-202ENST00000461127 RHEBQ15382 184 aa11.57□□□□□ -0.56
TOP3A-202ENST00000461127 WFDC10BQ8IUB3 73 aa11.57□□□□□ -0.56
TOP3A-202ENST00000461127 NUDT10Q8NFP7 164 aa11.57□□□□□ -0.56
TOP3A-202ENST00000461127 NUDT11Q96G61 164 aa11.57□□□□□ -0.56
TOP3A-202ENST00000461127 HHLA3Q9XRX5 114 aa11.57□□□□□ -0.56
TOP3A-202ENST00000461127 C19orf71A6NCJ1 209 aa11.56□□□□□ -0.56
TOP3A-202ENST00000461127 IGHV3-53P01767 116 aa11.56□□□□□ -0.56
TOP3A-202ENST00000461127 Q8N814 137 aa11.56□□□□□ -0.56
TOP3A-202ENST00000461127 OR2D3Q8NGH3 330 aa11.56□□□□□ -0.56
TOP3A-202ENST00000461127 RPP21Q9H633 154 aaKnown RBP11.56□□□□□ -0.56
TOP3A-202ENST00000461127 RPS10P5Q9NQ39 176 aa11.56□□□□□ -0.56
TOP3A-202ENST00000461127 C7orf77A4D0Y5 90 aa11.55□□□□□ -0.56
TOP3A-202ENST00000461127 LRCOL1A6NCL2 159 aa11.55□□□□□ -0.56
TOP3A-202ENST00000461127 SRIP30626 198 aa11.55□□□□□ -0.56
TOP3A-202ENST00000461127 CRYBA4P53673 196 aa11.55□□□□□ -0.56
TOP3A-202ENST00000461127 MUC21Q5SSG8 566 aa11.55□□□□□ -0.56
TOP3A-202ENST00000461127 FAM159AQ6UWV7 190 aa11.55□□□□□ -0.56
TOP3A-202ENST00000461127 C11orf72Q8NBR9 251 aa11.55□□□□□ -0.56
TOP3A-202ENST00000461127 ANAPC16Q96DE5 110 aa11.55□□□□□ -0.56
TOP3A-202ENST00000461127 TMSB15BA0A087X1C1 80 aa11.54□□□□□ -0.56
TOP3A-202ENST00000461127 XKRY2A2RUG3 117 aa11.54□□□□□ -0.56
TOP3A-202ENST00000461127 SPINK4O60575 86 aa11.54□□□□□ -0.56
TOP3A-202ENST00000461127 RPS20P60866 119 aaKnown RBP11.54□□□□□ -0.56
TOP3A-202ENST00000461127 Q6ZQT7 251 aa11.54□□□□□ -0.56
TOP3A-202ENST00000461127 KCNS1Q96KK3 526 aa11.54□□□□□ -0.56
TOP3A-202ENST00000461127 CTDSP1Q9GZU7 261 aa11.54□□□□□ -0.56
TOP3A-202ENST00000461127 IGHV1OR15-1A0A075B7D0 117 aa11.53□□□□□ -0.56
TOP3A-202ENST00000461127 TCL1AP56279 114 aa11.53□□□□□ -0.56
TOP3A-202ENST00000461127 ANXA2RQ3ZCQ2 193 aa11.53□□□□□ -0.56
TOP3A-202ENST00000461127 LINC01559Q495D7 138 aa11.53□□□□□ -0.56
TOP3A-202ENST00000461127 C11orf21Q9P2W6 132 aa11.53□□□□□ -0.56
TOP3A-202ENST00000461127 A0A087WWC5 75 aa11.52□□□□□ -0.57
TOP3A-202ENST00000461127 RPL19P84098 196 aaKnown RBP11.52□□□□□ -0.57
TOP3A-202ENST00000461127 CT83Q5H943 113 aa11.52□□□□□ -0.57
TOP3A-202ENST00000461127 V9GYV3 84 aa11.52□□□□□ -0.57
TOP3A-202ENST00000461127 LRP1Q07954 4544 aaKnown RBP11.51□□□□□ -0.57
TOP3A-202ENST00000461127 IGKV3D-20A0A0C4DH25 116 aa11.51□□□□□ -0.57
TOP3A-202ENST00000461127 A8MWL6 223 aa11.51□□□□□ -0.57
TOP3A-202ENST00000461127 FHL2Q14192 279 aa11.51□□□□□ -0.57
TOP3A-202ENST00000461127 ATRAIDQ6UW56 229 aa11.51□□□□□ -0.57
TOP3A-202ENST00000461127 TRGV11A0A075B6L2 103 aa11.5□□□□□ -0.57
TOP3A-202ENST00000461127 TRGV4A0A0C4DH28 118 aa11.5□□□□□ -0.57
TOP3A-202ENST00000461127 GRIFINA4D1Z8 144 aa11.5□□□□□ -0.57
TOP3A-202ENST00000461127 K7EQD1 137 aa11.5□□□□□ -0.57
TOP3A-202ENST00000461127 ASIPP42127 132 aa11.5□□□□□ -0.57
TOP3A-202ENST00000461127 ZNF415Q09FC8 603 aa11.5□□□□□ -0.57
TOP3A-202ENST00000461127 Q6ZSA8 131 aa11.5□□□□□ -0.57
TOP3A-202ENST00000461127 MRPL16Q9NX20 251 aaKnown RBP11.5□□□□□ -0.57
TOP3A-202ENST00000461127 DNAH8Q96JB1 4490 aa11.49□□□□□ -0.57
TOP3A-202ENST00000461127 GZMBP10144 247 aa11.49□□□□□ -0.57
TOP3A-202ENST00000461127 S100A4P26447 101 aaKnown RBP11.49□□□□□ -0.57
TOP3A-202ENST00000461127 TDRG1Q3Y452 100 aa11.49□□□□□ -0.57
TOP3A-202ENST00000461127 TSKUQ8WUA8 353 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms