RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 LYPD6BQ8NI32 183 aa10.24□□□□□ -0.77
ATG4B-213ENST00000460211 JPT2Q9H910 190 aa10.24□□□□□ -0.77
ATG4B-213ENST00000460211 K7EP13 123 aa10.23□□□□□ -0.77
ATG4B-213ENST00000460211 IGLV2-8P01709 118 aa10.23□□□□□ -0.77
ATG4B-213ENST00000460211 OR5AL1P0C617 328 aa10.23□□□□□ -0.77
ATG4B-213ENST00000460211 SPANXN1Q5VSR9 72 aa10.23□□□□□ -0.77
ATG4B-213ENST00000460211 OR2D3Q8NGH3 330 aa10.23□□□□□ -0.77
ATG4B-213ENST00000460211 ATP6V0E2Q8NHE4 81 aa10.23□□□□□ -0.77
ATG4B-213ENST00000460211 SAMD10Q9BYL1 202 aa10.23□□□□□ -0.77
ATG4B-213ENST00000460211 LY96Q9Y6Y9 160 aa10.23□□□□□ -0.77
ATG4B-213ENST00000460211 A0A087WWL8 130 aa10.22□□□□□ -0.77
ATG4B-213ENST00000460211 TRAV8-6A0A0B4J262 113 aa10.22□□□□□ -0.77
ATG4B-213ENST00000460211 TMEM250H0YL14 139 aa10.22□□□□□ -0.77
ATG4B-213ENST00000460211 SNAI2O43623 268 aa10.22□□□□□ -0.77
ATG4B-213ENST00000460211 P01737 135 aa10.22□□□□□ -0.77
ATG4B-213ENST00000460211 EVI2AP22794 236 aa10.22□□□□□ -0.77
ATG4B-213ENST00000460211 UFSP1Q6NVU6 142 aa10.22□□□□□ -0.77
ATG4B-213ENST00000460211 SSBP4Q9BWG4 385 aaPredicted RBP10.22□□□□□ -0.77
ATG4B-213ENST00000460211 C19orf71A6NCJ1 209 aa10.21□□□□□ -0.77
ATG4B-213ENST00000460211 CRYGDP07320 174 aa10.21□□□□□ -0.77
ATG4B-213ENST00000460211 Q6ZSN1 163 aa10.21□□□□□ -0.77
ATG4B-213ENST00000460211 OR10AG1Q8NH19 301 aa10.21□□□□□ -0.77
ATG4B-213ENST00000460211 EIF5A2Q9GZV4 153 aaKnown RBP10.21□□□□□ -0.77
ATG4B-213ENST00000460211 GTSF1LQ9H1H1 148 aa10.21□□□□□ -0.77
ATG4B-213ENST00000460211 TRBV20OR9-2A0A075B6H5 130 aa10.2□□□□□ -0.78
ATG4B-213ENST00000460211 GAGE12JA6NER3 117 aa10.2□□□□□ -0.78
ATG4B-213ENST00000460211 SMIM17P0DL12 118 aa10.2□□□□□ -0.78
ATG4B-213ENST00000460211 GAGE1Q13065 139 aa10.2□□□□□ -0.78
ATG4B-213ENST00000460211 GAGE4Q13068 117 aa10.2□□□□□ -0.78
ATG4B-213ENST00000460211 GAGE5Q13069 117 aa10.2□□□□□ -0.78
ATG4B-213ENST00000460211 GAGE13Q4V321 117 aa10.2□□□□□ -0.78
ATG4B-213ENST00000460211 OR10J3Q5JRS4 329 aa10.2□□□□□ -0.78
ATG4B-213ENST00000460211 LELP1Q5T871 98 aa10.2□□□□□ -0.78
ATG4B-213ENST00000460211 WFDC10BQ8IUB3 73 aa10.2□□□□□ -0.78
ATG4B-213ENST00000460211 TPPP3Q9BW30 176 aa10.2□□□□□ -0.78
ATG4B-213ENST00000460211 KRTAP1-5Q9BYS1 174 aa10.2□□□□□ -0.78
ATG4B-213ENST00000460211 HSPG2P98160 4391 aa10.2□□□□□ -0.78
ATG4B-213ENST00000460211 F2Z2F3 143 aa10.19□□□□□ -0.78
ATG4B-213ENST00000460211 DNAH10OSP0CZ25 163 aa10.19□□□□□ -0.78
ATG4B-213ENST00000460211 SSTP61278 116 aa10.19□□□□□ -0.78
ATG4B-213ENST00000460211 TOR2AQ5JU69 321 aa10.19□□□□□ -0.78
ATG4B-213ENST00000460211 NFE4Q86UQ8 179 aa10.19□□□□□ -0.78
ATG4B-213ENST00000460211 C10orf126Q8N4M7 172 aa10.19□□□□□ -0.78
ATG4B-213ENST00000460211 C14orf178Q8N769 122 aaPredicted RBP10.19□□□□□ -0.78
ATG4B-213ENST00000460211 FER1L6-AS1Q8NA97 138 aa10.19□□□□□ -0.78
ATG4B-213ENST00000460211 IGHV3-38A0A0C4DH36 116 aa10.18□□□□□ -0.78
ATG4B-213ENST00000460211 TRBV10-1A0A0K0K1A3 114 aa10.18□□□□□ -0.78
ATG4B-213ENST00000460211 NDUFS6O75380 124 aaKnown RBP10.18□□□□□ -0.78
ATG4B-213ENST00000460211 CEBPGP53567 150 aa10.18□□□□□ -0.78
ATG4B-213ENST00000460211 RAB4BP61018 213 aa10.18□□□□□ -0.78
ATG4B-213ENST00000460211 CACNG7P62955 275 aa10.18□□□□□ -0.78
ATG4B-213ENST00000460211 ZNF56Q15929 161 aa10.18□□□□□ -0.78
ATG4B-213ENST00000460211 OCC1Q8TAD7 63 aa10.18□□□□□ -0.78
ATG4B-213ENST00000460211 A0A087WWC5 75 aa10.17□□□□□ -0.78
ATG4B-213ENST00000460211 MUC21A0A0G2JKD1 596 aa10.17□□□□□ -0.78
ATG4B-213ENST00000460211 MUC21A0A140T8X8 626 aa10.17□□□□□ -0.78
ATG4B-213ENST00000460211 F5H697 171 aa10.17□□□□□ -0.78
ATG4B-213ENST00000460211 GZMBP10144 247 aa10.17□□□□□ -0.78
ATG4B-213ENST00000460211 LINC00315P59091 139 aa10.17□□□□□ -0.78
ATG4B-213ENST00000460211 RPL36AP83881 106 aaKnown RBP10.17□□□□□ -0.78
ATG4B-213ENST00000460211 TNP2Q05952 138 aa10.17□□□□□ -0.78
ATG4B-213ENST00000460211 NUDT10Q8NFP7 164 aa10.17□□□□□ -0.78
ATG4B-213ENST00000460211 RPL36ALQ969Q0 106 aaKnown RBP10.17□□□□□ -0.78
ATG4B-213ENST00000460211 NUDT11Q96G61 164 aa10.17□□□□□ -0.78
ATG4B-213ENST00000460211 FAM210AQ96ND0 272 aa10.17□□□□□ -0.78
ATG4B-213ENST00000460211 AP1S3Q96PC3 154 aa10.17□□□□□ -0.78
ATG4B-213ENST00000460211 IGLC6P0CF74 106 aa10.16□□□□□ -0.78
ATG4B-213ENST00000460211 LINC01556Q5JQF7 62 aa10.16□□□□□ -0.78
ATG4B-213ENST00000460211 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.16□□□□□ -0.78
ATG4B-213ENST00000460211 LINC00694P0DN24 101 aa10.15□□□□□ -0.78
ATG4B-213ENST00000460211 TEX261Q6UWH6 196 aa10.15□□□□□ -0.78
ATG4B-213ENST00000460211 RPP21Q9H633 154 aaKnown RBP10.15□□□□□ -0.78
ATG4B-213ENST00000460211 MSRB1Q9NZV6 116 aa10.15□□□□□ -0.78
ATG4B-213ENST00000460211 TRBV7-3A0A075B6L6 115 aa10.14□□□□□ -0.79
ATG4B-213ENST00000460211 SMIM7Q9BQ49 75 aa10.14□□□□□ -0.79
ATG4B-213ENST00000460211 RNASE7Q9H1E1 156 aaKnown RBP10.14□□□□□ -0.79
ATG4B-213ENST00000460211 ZNF727A8MUV8 499 aa10.13□□□□□ -0.79
ATG4B-213ENST00000460211 K7EN84 100 aa10.13□□□□□ -0.79
ATG4B-213ENST00000460211 TRGC1P0CF51 173 aa10.13□□□□□ -0.79
ATG4B-213ENST00000460211 WDR73Q6P4I2 378 aa10.13□□□□□ -0.79
ATG4B-213ENST00000460211 LYZL1Q6UWQ5 148 aa10.13□□□□□ -0.79
ATG4B-213ENST00000460211 OR10G8Q8NGN5 311 aa10.13□□□□□ -0.79
ATG4B-213ENST00000460211 Q9UF83 564 aa10.13□□□□□ -0.79
ATG4B-213ENST00000460211 H7C1H1 209 aa10.12□□□□□ -0.79
ATG4B-213ENST00000460211 EREGO14944 169 aa10.12□□□□□ -0.79
ATG4B-213ENST00000460211 GATCO43716 136 aaKnown RBP10.12□□□□□ -0.79
ATG4B-213ENST00000460211 ERVFC1-1P60608 527 aa10.12□□□□□ -0.79
ATG4B-213ENST00000460211 PEA15Q15121 130 aa10.12□□□□□ -0.79
ATG4B-213ENST00000460211 MAPKAPK5-AS1Q8N8E1 139 aa10.12□□□□□ -0.79
ATG4B-213ENST00000460211 A8MWL6 223 aa10.11□□□□□ -0.79
ATG4B-213ENST00000460211 C16orf90A8MZG2 172 aa10.11□□□□□ -0.79
ATG4B-213ENST00000460211 IGHV3-30P01768 117 aa10.11□□□□□ -0.79
ATG4B-213ENST00000460211 IGHV3-33P01772 117 aa10.11□□□□□ -0.79
ATG4B-213ENST00000460211 MGPP08493 103 aa10.11□□□□□ -0.79
ATG4B-213ENST00000460211 SRP19P09132 144 aaKnown RBP10.11□□□□□ -0.79
ATG4B-213ENST00000460211 IGHV3-30-3P0DP02 117 aa10.11□□□□□ -0.79
ATG4B-213ENST00000460211 IGHV3-30-5P0DP03 117 aa10.11□□□□□ -0.79
ATG4B-213ENST00000460211 NTF3P20783 257 aa10.11□□□□□ -0.79
ATG4B-213ENST00000460211 UBE2D3P61077 147 aa10.11□□□□□ -0.79
ATG4B-213ENST00000460211 UBE2D2P62837 147 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms