RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 C20orf78Q9BR46 151 aa13.52□□□□□ -0.24
HPS3-202ENST00000460120 GATA3P23771 443 aa13.52□□□□□ -0.25
HPS3-202ENST00000460120 HOXD3P31249 432 aaPredicted RBP13.52□□□□□ -0.25
HPS3-202ENST00000460120 ZNF56Q15929 161 aa13.52□□□□□ -0.25
HPS3-202ENST00000460120 PLNP26678 52 aa13.51□□□□□ -0.25
HPS3-202ENST00000460120 APRG1Q8IVJ8 170 aa13.51□□□□□ -0.25
HPS3-202ENST00000460120 TP53TG1Q9Y2A0 90 aa13.51□□□□□ -0.25
HPS3-202ENST00000460120 PRSS29PA6NIE9 313 aa13.51□□□□□ -0.25
HPS3-202ENST00000460120 SMIM13P0DJ93 91 aa13.51□□□□□ -0.25
HPS3-202ENST00000460120 DSCR9P59020 149 aa13.51□□□□□ -0.25
HPS3-202ENST00000460120 Q8N1Y9 231 aa13.51□□□□□ -0.25
HPS3-202ENST00000460120 SLURP1P55000 103 aa13.5□□□□□ -0.25
HPS3-202ENST00000460120 LINC00315P59091 139 aa13.5□□□□□ -0.25
HPS3-202ENST00000460120 SONP18583 2426 aaKnown RBP13.5□□□□□ -0.25
HPS3-202ENST00000460120 A0A0J9YX75 114 aa13.5□□□□□ -0.25
HPS3-202ENST00000460120 NEXN-AS1Q8NBZ9 246 aa13.5□□□□□ -0.25
HPS3-202ENST00000460120 HIST1H4GQ99525 98 aa13.5□□□□□ -0.25
HPS3-202ENST00000460120 VPREB3Q9UKI3 123 aa13.5□□□□□ -0.25
HPS3-202ENST00000460120 KIF25-AS1Q9Y6Z4 181 aa13.5□□□□□ -0.25
HPS3-202ENST00000460120 A0A096LNT2 108 aa13.49□□□□□ -0.25
HPS3-202ENST00000460120 IGHV3-73A0A0B4J1V6 119 aa13.49□□□□□ -0.25
HPS3-202ENST00000460120 KNCNA6PVL3 124 aa13.49□□□□□ -0.25
HPS3-202ENST00000460120 SAP30O75446 220 aa13.49□□□□□ -0.25
HPS3-202ENST00000460120 SPCS1Q9Y6A9 102 aa13.49□□□□□ -0.25
HPS3-202ENST00000460120 HLA-DRB4P13762 266 aa13.49□□□□□ -0.25
HPS3-202ENST00000460120 CD300EQ496F6 205 aaPredicted RBP13.49□□□□□ -0.25
HPS3-202ENST00000460120 HLA-DRB4X5D2U9 266 aa13.49□□□□□ -0.25
HPS3-202ENST00000460120 ZNF469Q96JG9 3925 aaPredicted RBP13.48□□□□□ -0.25
HPS3-202ENST00000460120 OR11H12B2RN74 326 aa13.48□□□□□ -0.25
HPS3-202ENST00000460120 OR11H1Q8NG94 326 aa13.48□□□□□ -0.25
HPS3-202ENST00000460120 OR11H2Q8NH07 326 aa13.48□□□□□ -0.25
HPS3-202ENST00000460120 ZNF702PQ9H963 129 aa13.48□□□□□ -0.25
HPS3-202ENST00000460120 A0A1W2PPM0 123 aa13.48□□□□□ -0.25
HPS3-202ENST00000460120 SDHAF1A6NFY7 115 aa13.48□□□□□ -0.25
HPS3-202ENST00000460120 K7EQG2 157 aa13.48□□□□□ -0.25
HPS3-202ENST00000460120 MED14OSP0DP75 135 aa13.48□□□□□ -0.25
HPS3-202ENST00000460120 SAMD5Q5TGI4 173 aa13.48□□□□□ -0.25
HPS3-202ENST00000460120 GTF2H5Q6ZYL4 71 aa13.48□□□□□ -0.25
HPS3-202ENST00000460120 CEND1Q8N111 149 aa13.48□□□□□ -0.25
HPS3-202ENST00000460120 EPG5Q9HCE0 2579 aa13.47□□□□□ -0.25
HPS3-202ENST00000460120 IGHV3-16A0A0C4DH30 117 aa13.47□□□□□ -0.25
HPS3-202ENST00000460120 LGALS1P09382 135 aaKnown RBP13.47□□□□□ -0.25
HPS3-202ENST00000460120 SCGB2A2Q13296 93 aa13.47□□□□□ -0.25
HPS3-202ENST00000460120 TCTEX1D4Q5JR98 221 aa13.47□□□□□ -0.25
HPS3-202ENST00000460120 CYSLTR1Q9Y271 337 aa13.47□□□□□ -0.25
HPS3-202ENST00000460120 IGHV4-31P0DP07 118 aa13.47□□□□□ -0.25
HPS3-202ENST00000460120 K7EP34 96 aa13.46□□□□□ -0.25
HPS3-202ENST00000460120 K7ERU9 68 aa13.46□□□□□ -0.25
HPS3-202ENST00000460120 ZFP2Q6ZN57 461 aa13.46□□□□□ -0.25
HPS3-202ENST00000460120 KLHL30-AS1Q8NEE0 82 aa13.46□□□□□ -0.25
HPS3-202ENST00000460120 OPRPNQ99935 248 aaPredicted RBP13.46□□□□□ -0.25
HPS3-202ENST00000460120 TRAV12-1A0A0B4J245 112 aa13.46□□□□□ -0.26
HPS3-202ENST00000460120 PRADC1Q9BSG0 188 aa13.46□□□□□ -0.26
HPS3-202ENST00000460120 HIGD1BQ9P298 99 aa13.46□□□□□ -0.26
HPS3-202ENST00000460120 TRBV7-9A0A0J9YWB2 115 aa13.45□□□□□ -0.26
HPS3-202ENST00000460120 TSHBP01222 138 aa13.45□□□□□ -0.26
HPS3-202ENST00000460120 FABP2P12104 132 aa13.45□□□□□ -0.26
HPS3-202ENST00000460120 UFSP1Q6NVU6 142 aa13.45□□□□□ -0.26
HPS3-202ENST00000460120 C11orf44Q8N8P7 122 aa13.45□□□□□ -0.26
HPS3-202ENST00000460120 KIR2DL4Q99706 377 aa13.45□□□□□ -0.26
HPS3-202ENST00000460120 NXPH4O95158 308 aa13.44□□□□□ -0.26
HPS3-202ENST00000460120 ZNF876PQ49A33 203 aa13.44□□□□□ -0.26
HPS3-202ENST00000460120 IGHV1OR15-1A0A075B7D0 117 aa13.44□□□□□ -0.26
HPS3-202ENST00000460120 Q6YL49 198 aa13.44□□□□□ -0.26
HPS3-202ENST00000460120 NBPF19A0A087WUL8 3843 aa13.43□□□□□ -0.26
HPS3-202ENST00000460120 MYMXA0A1B0GTQ4 84 aa13.43□□□□□ -0.26
HPS3-202ENST00000460120 CRYGDP07320 174 aa13.43□□□□□ -0.26
HPS3-202ENST00000460120 DEFB131AP59861 70 aa13.43□□□□□ -0.26
HPS3-202ENST00000460120 SETD2Q9BYW2 2564 aaPredicted RBP13.43□□□□□ -0.26
HPS3-202ENST00000460120 C11orf86A6NJI1 115 aa13.43□□□□□ -0.26
HPS3-202ENST00000460120 ZNF815PA8K554 130 aa13.42□□□□□ -0.26
HPS3-202ENST00000460120 RBMY1A1P0DJD3 496 aaKnown RBP13.42□□□□□ -0.26
HPS3-202ENST00000460120 RBMY1CP0DJD4 496 aa13.42□□□□□ -0.26
HPS3-202ENST00000460120 RBMY1FQ15415 496 aaKnown RBP13.42□□□□□ -0.26
HPS3-202ENST00000460120 SCGB1D4Q6XE38 83 aa13.42□□□□□ -0.26
HPS3-202ENST00000460120 PLEKHB2Q96CS7 222 aa13.42□□□□□ -0.26
HPS3-202ENST00000460120 Q96MF0 132 aa13.42□□□□□ -0.26
HPS3-202ENST00000460120 CCDC168Q8NDH2 2452 aa13.42□□□□□ -0.26
HPS3-202ENST00000460120 UBR5O95071 2799 aaPredicted RBP13.42□□□□□ -0.26
HPS3-202ENST00000460120 J3QLI3 93 aa13.42□□□□□ -0.26
HPS3-202ENST00000460120 PPP1R17O96001 155 aa13.42□□□□□ -0.26
HPS3-202ENST00000460120 VCYO14598 125 aa13.41□□□□□ -0.26
HPS3-202ENST00000460120 P0DMU3 169 aa13.41□□□□□ -0.26
HPS3-202ENST00000460120 FAM231AP0DMU4 169 aa13.41□□□□□ -0.26
HPS3-202ENST00000460120 FAM231CP0DMU5 169 aa13.41□□□□□ -0.26
HPS3-202ENST00000460120 POLR2KP53803 58 aaKnown RBP13.41□□□□□ -0.26
HPS3-202ENST00000460120 TMEM170BQ5T4T1 132 aa13.41□□□□□ -0.26
HPS3-202ENST00000460120 SFTA2Q6UW10 78 aa13.41□□□□□ -0.26
HPS3-202ENST00000460120 MTURNQ8N3F0 131 aa13.41□□□□□ -0.26
HPS3-202ENST00000460120 ZNF580Q9UK33 172 aa13.41□□□□□ -0.26
HPS3-202ENST00000460120 PROK1P58294 105 aa13.41□□□□□ -0.26
HPS3-202ENST00000460120 MORN3Q6PF18 240 aaPredicted RBP13.41□□□□□ -0.26
HPS3-202ENST00000460120 SYT8Q8NBV8 401 aa13.41□□□□□ -0.26
HPS3-202ENST00000460120 C9orf85Q96MD7 179 aa13.41□□□□□ -0.26
HPS3-202ENST00000460120 NF1P21359 2839 aa13.41□□□□□ -0.26
HPS3-202ENST00000460120 UBE2E2Q96LR5 201 aa13.4□□□□□ -0.26
HPS3-202ENST00000460120 IGHV3-64A0A075B6Q5 118 aa13.4□□□□□ -0.27
HPS3-202ENST00000460120 ELANEP08246 267 aa13.4□□□□□ -0.27
HPS3-202ENST00000460120 SAMD13Q5VXD3 122 aa13.4□□□□□ -0.27
HPS3-202ENST00000460120 CFAP161Q6P656 301 aa13.4□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 1050.6 ms