RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 DEFA3P59666 94 aa1.34□□□□□ -2.2
NEDD1-204ENST00000457368 NEDD8Q15843 81 aa1.34□□□□□ -2.2
NEDD1-204ENST00000457368 MUC21Q5SSG8 566 aa1.34□□□□□ -2.2
NEDD1-204ENST00000457368 OR8I2Q8N0Y5 310 aa1.34□□□□□ -2.2
NEDD1-204ENST00000457368 OR10G9Q8NGN4 311 aa1.34□□□□□ -2.2
NEDD1-204ENST00000457368 ATP6V0E2Q8NHE4 81 aa1.34□□□□□ -2.2
NEDD1-204ENST00000457368 BLNKQ8WV28 456 aa1.34□□□□□ -2.2
NEDD1-204ENST00000457368 DEDD2Q8WXF8 326 aa1.34□□□□□ -2.2
NEDD1-204ENST00000457368 RMI2Q96E14 147 aa1.34□□□□□ -2.2
NEDD1-204ENST00000457368 MND1Q9BWT6 205 aa1.34□□□□□ -2.2
NEDD1-204ENST00000457368 SLC25A39Q9BZJ4 359 aaPredicted RBP1.34□□□□□ -2.2
NEDD1-204ENST00000457368 FXYD6Q9H0Q3 95 aa1.34□□□□□ -2.2
NEDD1-204ENST00000457368 VAX2Q9UIW0 290 aa1.34□□□□□ -2.2
NEDD1-204ENST00000457368 TRGV2A0A075B6R0 118 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 A0A0B4J2A0 478 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 RBFOX3A6NFN3 312 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 S100A8P05109 93 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 SEC11BP0C7V7 166 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 SULT1A3P0DMM9 295 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 SULT1A4P0DMN0 295 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 CXCL3P19876 107 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 PFN2P35080 140 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 AKR1C3P42330 323 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 RPL29P47914 159 aaKnown RBP1.33□□□□□ -2.2
NEDD1-204ENST00000457368 MXD1Q05195 221 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 BAXQ07812 192 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 PMVKQ15126 192 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 TMEM128Q5BJH2 165 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 C9orf163Q8N9P6 203 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 OR10G8Q8NGN5 311 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 IL22RA2Q969J5 263 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 DIRAS2Q96HU8 199 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 PGLYRP4Q96LB8 373 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 FAM19A4Q96LR4 140 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 FAM218AQ96MZ4 157 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 VPS25Q9BRG1 176 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 ATG5Q9H1Y0 275 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 SH3BGRL3Q9H299 93 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 NIT2Q9NQR4 276 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 COPZ2Q9P299 210 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 SHPKQ9UHJ6 478 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 MUC17Q685J3 4493 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 IGHV1OR15-1A0A075B7D0 117 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 TRAV8-6A0A0B4J262 113 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 SNRPGP15A8MWD9 76 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 KLLNB2CW77 178 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 H3BRN7 92 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 SLC25A5P05141 298 aaKnown RBP1.33□□□□□ -2.2
NEDD1-204ENST00000457368 SNRPCP09234 159 aaKnown RBP1.33□□□□□ -2.2
NEDD1-204ENST00000457368 TAS2R46P59540 309 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 TAS2R20P59543 309 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 FXYD4P59646 89 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 SURF2Q15527 256 aaPredicted RBP1.33□□□□□ -2.2
NEDD1-204ENST00000457368 CLLU1Q5K131 121 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 REG3GQ6UW15 175 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 SPINK6Q6UWN8 80 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 TCTE3Q8IZS6 198 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 ZNF555Q8NEP9 628 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 TMED6Q8WW62 240 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 C11orf52Q96A22 123 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 C9orf85Q96MD7 179 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 PDCD10Q9BUL8 212 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 U3KQ87 197 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 TRDV1A0A1B0GX56 115 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 IGSF23A1L1A6 192 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 MAP1LC3B2A6NCE7 125 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 KRBOX1C9JBD0 128 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 PFN1P07737 140 aaKnown RBP1.33□□□□□ -2.2
NEDD1-204ENST00000457368 PTHLHP12272 177 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 CRISP2P16562 243 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 RPL7P18124 248 aaKnown RBP1.33□□□□□ -2.2
NEDD1-204ENST00000457368 GATA2P23769 480 aaPredicted RBP1.33□□□□□ -2.2
NEDD1-204ENST00000457368 HBG1P69891 147 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 HBG2P69892 147 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 FABP5Q01469 135 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 HIST1H1AQ02539 215 aaPredicted RBP1.33□□□□□ -2.2
NEDD1-204ENST00000457368 SDIM1Q6ZPB5 146 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 PACRGLQ8N7B6 248 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 ZNF431Q8TF32 576 aaPredicted RBP1.33□□□□□ -2.2
NEDD1-204ENST00000457368 SFT2D1Q8WV19 159 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 RPUSD4Q96CM3 377 aaKnown RBP1.33□□□□□ -2.2
NEDD1-204ENST00000457368 TCEAL7Q9BRU2 100 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 SLC50A1Q9BRV3 221 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 C2orf88Q9BSF0 95 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 MARVELD1Q9BSK0 173 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 SHANK2-AS3Q9BTD1 123 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 CHCHD7Q9BUK0 85 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 CCDC32Q9BV29 185 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 MAP1LC3BQ9GZQ8 125 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 SLC25A31Q9H0C2 315 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 PLAC8Q9NZF1 115 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 SS18L2Q9UHA2 77 aa1.33□□□□□ -2.2
NEDD1-204ENST00000457368 TRGV1A0A0A0MS02 117 aa1.32□□□□□ -2.2
NEDD1-204ENST00000457368 C9orf170A2RU37 121 aa1.32□□□□□ -2.2
NEDD1-204ENST00000457368 GABARAPO95166 117 aa1.32□□□□□ -2.2
NEDD1-204ENST00000457368 PRSS1P07477 247 aa1.32□□□□□ -2.2
NEDD1-204ENST00000457368 PRSS2P07478 247 aa1.32□□□□□ -2.2
NEDD1-204ENST00000457368 LINC00694P0DN24 101 aa1.32□□□□□ -2.2
NEDD1-204ENST00000457368 ESDP10768 282 aa1.32□□□□□ -2.2
NEDD1-204ENST00000457368 RAB3BP20337 219 aa1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms