RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 FAM19A3Q7Z5A8 133 aa3.52□□□□□ -1.85
RIF1-207ENST00000454583 OR2D3Q8NGH3 330 aa3.52□□□□□ -1.85
RIF1-207ENST00000454583 TLN2Q9Y4G6 2542 aa3.52□□□□□ -1.85
RIF1-207ENST00000454583 IGHV3-66A0A0C4DH42 116 aa3.52□□□□□ -1.85
RIF1-207ENST00000454583 SPINK4O60575 86 aa3.52□□□□□ -1.85
RIF1-207ENST00000454583 NPYP01303 97 aa3.52□□□□□ -1.85
RIF1-207ENST00000454583 TSPOP30536 169 aa3.52□□□□□ -1.85
RIF1-207ENST00000454583 AMELXQ99217 191 aa3.52□□□□□ -1.85
RIF1-207ENST00000454583 C20orf202A1L168 122 aa3.51□□□□□ -1.85
RIF1-207ENST00000454583 SYS1-DBNDD2H3BUS1 97 aa3.51□□□□□ -1.85
RIF1-207ENST00000454583 M0QZ24 198 aa3.51□□□□□ -1.85
RIF1-207ENST00000454583 DLEU1O43261 78 aa3.51□□□□□ -1.85
RIF1-207ENST00000454583 LINC00614P0C842 121 aa3.51□□□□□ -1.85
RIF1-207ENST00000454583 POLR2KP53803 58 aaKnown RBP3.51□□□□□ -1.85
RIF1-207ENST00000454583 UBE2G1P62253 170 aa3.51□□□□□ -1.85
RIF1-207ENST00000454583 LBHQ53QV2 105 aaPredicted RBP3.51□□□□□ -1.85
RIF1-207ENST00000454583 KIR2DL5BQ8NHK3 375 aa3.51□□□□□ -1.85
RIF1-207ENST00000454583 MIEN1Q9BRT3 115 aa3.51□□□□□ -1.85
RIF1-207ENST00000454583 C11orf68Q9H3H3 251 aaKnown RBP3.51□□□□□ -1.85
RIF1-207ENST00000454583 TP53TG1Q9Y2A0 90 aa3.51□□□□□ -1.85
RIF1-207ENST00000454583 LRP1BQ9NZR2 4599 aa3.51□□□□□ -1.85
RIF1-207ENST00000454583 SETD2Q9BYW2 2564 aaPredicted RBP3.51□□□□□ -1.85
RIF1-207ENST00000454583 FABP5P3A8MUU1 101 aa3.51□□□□□ -1.85
RIF1-207ENST00000454583 S100A6P06703 90 aa3.51□□□□□ -1.85
RIF1-207ENST00000454583 NTF3P20783 257 aa3.51□□□□□ -1.85
RIF1-207ENST00000454583 C9orf152Q5JTZ5 239 aa3.51□□□□□ -1.85
RIF1-207ENST00000454583 OR10AG1Q8NH19 301 aa3.51□□□□□ -1.85
RIF1-207ENST00000454583 NOTCH2Q04721 2471 aa3.51□□□□□ -1.85
RIF1-207ENST00000454583 MGST1P10620 155 aaKnown RBP3.51□□□□□ -1.85
RIF1-207ENST00000454583 PMCHP20382 165 aa3.51□□□□□ -1.85
RIF1-207ENST00000454583 AMN1Q8IY45 258 aa3.51□□□□□ -1.85
RIF1-207ENST00000454583 K7EMI3 77 aa3.5□□□□□ -1.85
RIF1-207ENST00000454583 LGALS9BQ3B8N2 356 aa3.5□□□□□ -1.85
RIF1-207ENST00000454583 LGALS9CQ6DKI2 356 aa3.5□□□□□ -1.85
RIF1-207ENST00000454583 S100A7AQ86SG5 101 aa3.5□□□□□ -1.85
RIF1-207ENST00000454583 RNF183Q96D59 192 aa3.5□□□□□ -1.85
RIF1-207ENST00000454583 MRPS16Q9Y3D3 137 aaKnown RBP3.5□□□□□ -1.85
RIF1-207ENST00000454583 HIVEP2P31629 2446 aa3.5□□□□□ -1.85
RIF1-207ENST00000454583 D6R8Y8 96 aa3.5□□□□□ -1.85
RIF1-207ENST00000454583 AZU1P20160 251 aa3.5□□□□□ -1.85
RIF1-207ENST00000454583 IFI27P40305 119 aaPredicted RBP3.5□□□□□ -1.85
RIF1-207ENST00000454583 FAM19A2Q8N3H0 131 aa3.5□□□□□ -1.85
RIF1-207ENST00000454583 FER1L6-AS1Q8NA97 138 aa3.5□□□□□ -1.85
RIF1-207ENST00000454583 IGIPA6NJ69 53 aa3.5□□□□□ -1.85
RIF1-207ENST00000454583 PRB4P10163 310 aaPredicted RBP3.5□□□□□ -1.85
RIF1-207ENST00000454583 BMI1P35226 326 aa3.5□□□□□ -1.85
RIF1-207ENST00000454583 CACNG7P62955 275 aa3.5□□□□□ -1.85
RIF1-207ENST00000454583 DAZ2Q13117 558 aaKnown RBP3.5□□□□□ -1.85
RIF1-207ENST00000454583 ODF1Q14990 250 aa3.5□□□□□ -1.85
RIF1-207ENST00000454583 PET117Q6UWS5 81 aa3.5□□□□□ -1.85
RIF1-207ENST00000454583 Q8N8P6 123 aa3.5□□□□□ -1.85
RIF1-207ENST00000454583 TNXBP22105 4242 aa3.49□□□□□ -1.85
RIF1-207ENST00000454583 IGHV3-49A0A0A0MS15 119 aa3.49□□□□□ -1.85
RIF1-207ENST00000454583 TMEM189A5PLL7 270 aa3.49□□□□□ -1.85
RIF1-207ENST00000454583 BTF3P20290 206 aaKnown RBP3.49□□□□□ -1.85
RIF1-207ENST00000454583 TFPI2P48307 235 aa3.49□□□□□ -1.85
RIF1-207ENST00000454583 TOMM6Q96B49 74 aa3.49□□□□□ -1.85
RIF1-207ENST00000454583 MRAP2Q96G30 205 aa3.49□□□□□ -1.85
RIF1-207ENST00000454583 AAMDCQ9H7C9 122 aa3.49□□□□□ -1.85
RIF1-207ENST00000454583 TP73-AS1Q9UF72 201 aa3.49□□□□□ -1.85
RIF1-207ENST00000454583 IGLV4-69A0A075B6H9 119 aa3.49□□□□□ -1.85
RIF1-207ENST00000454583 TRAV12-1A0A0B4J245 112 aa3.49□□□□□ -1.85
RIF1-207ENST00000454583 TRBV27A0A0K0K1C4 114 aa3.49□□□□□ -1.85
RIF1-207ENST00000454583 CBY3A6NI87 242 aa3.49□□□□□ -1.85
RIF1-207ENST00000454583 SBSPONQ8IVN8 264 aa3.49□□□□□ -1.85
RIF1-207ENST00000454583 PHLDA1Q8WV24 401 aaPredicted RBP3.49□□□□□ -1.85
RIF1-207ENST00000454583 TRAV9-2A0A087WT02 112 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 PPBPP02775 128 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 EVI2AP22794 236 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 S100A2P29034 98 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 NUTF2P61970 127 aaKnown RBP3.48□□□□□ -1.85
RIF1-207ENST00000454583 RIGQ13278 110 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 PMCHL1Q16048 86 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 BOD1L2Q8IYS8 172 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 NEXN-AS1Q8NBZ9 246 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 MCRIP2Q9BUT9 160 aaKnown RBP3.48□□□□□ -1.85
RIF1-207ENST00000454583 IGHV3OR16-13A0A075B7E8 117 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 IGHV3-74A0A0B4J1X5 117 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 PRM2P04554 102 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 IGHV4-30-4P0DP06 118 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 GATA1P15976 413 aaPredicted RBP3.48□□□□□ -1.85
RIF1-207ENST00000454583 S100A7P31151 101 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 NSUN5P1Q3KNT7 163 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 Q6ZSN1 163 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 C11orf44Q8N8P7 122 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 C20orf78Q9BR46 151 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 COL6A5A8TX70 2615 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 KNCNA6PVL3 124 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 TNFRSF6BO95407 300 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 P0DMU3 169 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 FAM231AP0DMU4 169 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 FAM231CP0DMU5 169 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 RNASE4P34096 147 aaKnown RBP3.48□□□□□ -1.85
RIF1-207ENST00000454583 GAGE1Q13065 139 aa3.48□□□□□ -1.85
RIF1-207ENST00000454583 A0A1W2PRX2 142 aa3.47□□□□□ -1.85
RIF1-207ENST00000454583 C7orf71A4D174 169 aa3.47□□□□□ -1.85
RIF1-207ENST00000454583 FAM229AH3BQW9 127 aa3.47□□□□□ -1.85
RIF1-207ENST00000454583 K7EQM0 130 aa3.47□□□□□ -1.85
RIF1-207ENST00000454583 M0QY20 66 aa3.47□□□□□ -1.85
RIF1-207ENST00000454583 RS1O15537 224 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms