RNA–Protein interactions for RNA: ENST00000449864.5

HDLBP-223, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-223ENST00000449864 MLST8Q9BVC4 326 aa10.72□□□□□ -0.69
HDLBP-223ENST00000449864 GTSF1LQ9H1H1 148 aa10.72□□□□□ -0.69
HDLBP-223ENST00000449864 SCRT2Q9NQ03 307 aa10.72□□□□□ -0.69
HDLBP-223ENST00000449864 A0A087WWL8 130 aa10.71□□□□□ -0.69
HDLBP-223ENST00000449864 MEF2BQ02080 365 aaPredicted RBP10.71□□□□□ -0.69
HDLBP-223ENST00000449864 CENPWQ5EE01 88 aa10.71□□□□□ -0.69
HDLBP-223ENST00000449864 UFSP1Q6NVU6 142 aa10.71□□□□□ -0.69
HDLBP-223ENST00000449864 C14orf178Q8N769 122 aaPredicted RBP10.71□□□□□ -0.69
HDLBP-223ENST00000449864 HERC2O95714 4834 aa10.71□□□□□ -0.7
HDLBP-223ENST00000449864 CXCL1P09341 107 aa10.7□□□□□ -0.7
HDLBP-223ENST00000449864 LINC01556Q5JQF7 62 aa10.7□□□□□ -0.7
HDLBP-223ENST00000449864 PDE6DO43924 150 aa10.69□□□□□ -0.7
HDLBP-223ENST00000449864 IGHV3-30P01768 117 aa10.69□□□□□ -0.7
HDLBP-223ENST00000449864 IGHV3-33P01772 117 aa10.69□□□□□ -0.7
HDLBP-223ENST00000449864 LINC00694P0DN24 101 aa10.69□□□□□ -0.7
HDLBP-223ENST00000449864 IGHV3-30-3P0DP02 117 aa10.69□□□□□ -0.7
HDLBP-223ENST00000449864 IGHV3-30-5P0DP03 117 aa10.69□□□□□ -0.7
HDLBP-223ENST00000449864 C9orf62Q8N4C0 152 aa10.69□□□□□ -0.7
HDLBP-223ENST00000449864 BCL2P10415 239 aa10.68□□□□□ -0.7
HDLBP-223ENST00000449864 GNG4P50150 75 aa10.68□□□□□ -0.7
HDLBP-223ENST00000449864 SPANXN1Q5VSR9 72 aa10.68□□□□□ -0.7
HDLBP-223ENST00000449864 OR10AG1Q8NH19 301 aa10.68□□□□□ -0.7
HDLBP-223ENST00000449864 DNAH11Q96DT5 4516 aa10.67□□□□□ -0.7
HDLBP-223ENST00000449864 A0A087WWC5 75 aa10.67□□□□□ -0.7
HDLBP-223ENST00000449864 PSCAO43653 123 aa10.67□□□□□ -0.7
HDLBP-223ENST00000449864 KRTAP10-2P60368 255 aa10.67□□□□□ -0.7
HDLBP-223ENST00000449864 ZNF56Q15929 161 aa10.67□□□□□ -0.7
HDLBP-223ENST00000449864 DAZAP1Q96EP5 407 aaKnown RBP10.67□□□□□ -0.7
HDLBP-223ENST00000449864 MED9Q9NWA0 146 aa10.67□□□□□ -0.7
HDLBP-223ENST00000449864 VAX2Q9UIW0 290 aa10.67□□□□□ -0.7
HDLBP-223ENST00000449864 MUC21A0A0G2JKD1 596 aa10.66□□□□□ -0.7
HDLBP-223ENST00000449864 MUC21A0A140T8X8 626 aa10.66□□□□□ -0.7
HDLBP-223ENST00000449864 OR5AL1P0C617 328 aa10.66□□□□□ -0.7
HDLBP-223ENST00000449864 Q9HAA7 133 aa10.66□□□□□ -0.7
HDLBP-223ENST00000449864 Q9UF83 564 aa10.66□□□□□ -0.7
HDLBP-223ENST00000449864 RAB19A4D1S5 217 aa10.65□□□□□ -0.7
HDLBP-223ENST00000449864 SNAI2O43623 268 aa10.65□□□□□ -0.7
HDLBP-223ENST00000449864 TAGLN2P37802 199 aaKnown RBP10.65□□□□□ -0.7
HDLBP-223ENST00000449864 SSTP61278 116 aa10.65□□□□□ -0.7
HDLBP-223ENST00000449864 RPL36AP83881 106 aaKnown RBP10.65□□□□□ -0.7
HDLBP-223ENST00000449864 RPL36ALQ969Q0 106 aaKnown RBP10.65□□□□□ -0.7
HDLBP-223ENST00000449864 SMIM12Q96EX1 92 aa10.65□□□□□ -0.7
HDLBP-223ENST00000449864 TPPP3Q9BW30 176 aa10.65□□□□□ -0.7
HDLBP-223ENST00000449864 DYNC1H1Q14204 4646 aaKnown RBP10.64□□□□□ -0.71
HDLBP-223ENST00000449864 A0A087WTM6 91 aa10.64□□□□□ -0.71
HDLBP-223ENST00000449864 TRBV10-1A0A0K0K1A3 114 aa10.64□□□□□ -0.71
HDLBP-223ENST00000449864 IBA57-AS1B1ANH7 110 aa10.64□□□□□ -0.71
HDLBP-223ENST00000449864 CDK2AP2O75956 126 aa10.64□□□□□ -0.71
HDLBP-223ENST00000449864 IGLV2-8P01709 118 aa10.64□□□□□ -0.71
HDLBP-223ENST00000449864 RPS20P60866 119 aaKnown RBP10.64□□□□□ -0.71
HDLBP-223ENST00000449864 RAB4BP61018 213 aa10.64□□□□□ -0.71
HDLBP-223ENST00000449864 ALKAL2Q6UX46 152 aa10.64□□□□□ -0.71
HDLBP-223ENST00000449864 OR2D3Q8NGH3 330 aa10.64□□□□□ -0.71
HDLBP-223ENST00000449864 BIN3Q9NQY0 253 aa10.64□□□□□ -0.71
HDLBP-223ENST00000449864 URGCP-MRPS24S4R325 110 aa10.64□□□□□ -0.71
HDLBP-223ENST00000449864 SMIM17P0DL12 118 aa10.63□□□□□ -0.71
HDLBP-223ENST00000449864 LAGE3Q14657 143 aa10.63□□□□□ -0.71
HDLBP-223ENST00000449864 CDPF1Q6NVV7 123 aa10.63□□□□□ -0.71
HDLBP-223ENST00000449864 AP1S3Q96PC3 154 aa10.63□□□□□ -0.71
HDLBP-223ENST00000449864 SSBP4Q9BWG4 385 aaPredicted RBP10.63□□□□□ -0.71
HDLBP-223ENST00000449864 PGPEP1Q9NXJ5 209 aa10.63□□□□□ -0.71
HDLBP-223ENST00000449864 TRBV20OR9-2A0A075B6H5 130 aa10.62□□□□□ -0.71
HDLBP-223ENST00000449864 XKRY2A2RUG3 117 aa10.62□□□□□ -0.71
HDLBP-223ENST00000449864 F5H697 171 aa10.62□□□□□ -0.71
HDLBP-223ENST00000449864 P01737 135 aa10.62□□□□□ -0.71
HDLBP-223ENST00000449864 GZMBP10144 247 aa10.62□□□□□ -0.71
HDLBP-223ENST00000449864 BLOC1S1P78537 153 aa10.62□□□□□ -0.71
HDLBP-223ENST00000449864 FER1L6-AS1Q8NA97 138 aa10.62□□□□□ -0.71
HDLBP-223ENST00000449864 TRBV7-3A0A075B6L6 115 aa10.61□□□□□ -0.71
HDLBP-223ENST00000449864 C19orf71A6NCJ1 209 aa10.61□□□□□ -0.71
HDLBP-223ENST00000449864 FUSP35637 526 aaKnown RBP eCLIP10.61□□□□□ -0.719e-8■□□□□ 11.3
HDLBP-223ENST00000449864 UBE2D3P61077 147 aa10.61□□□□□ -0.71
HDLBP-223ENST00000449864 UBE2D2P62837 147 aa10.61□□□□□ -0.71
HDLBP-223ENST00000449864 Q8N3U1 123 aa10.61□□□□□ -0.71
HDLBP-223ENST00000449864 RBFOX3A6NFN3 312 aa10.6□□□□□ -0.71
HDLBP-223ENST00000449864 TOR2AQ5JU69 321 aa10.6□□□□□ -0.71
HDLBP-223ENST00000449864 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.6□□□□□ -0.71
HDLBP-223ENST00000449864 MGPP08493 103 aa10.59□□□□□ -0.71
HDLBP-223ENST00000449864 IGLC6P0CF74 106 aa10.59□□□□□ -0.71
HDLBP-223ENST00000449864 NKX2-5P52952 324 aaPredicted RBP10.59□□□□□ -0.71
HDLBP-223ENST00000449864 CACNG7P62955 275 aa10.59□□□□□ -0.71
HDLBP-223ENST00000449864 KCNIP4Q6PIL6 250 aa10.59□□□□□ -0.71
HDLBP-223ENST00000449864 DAZ4Q86SG3 579 aaKnown RBP10.59□□□□□ -0.71
HDLBP-223ENST00000449864 OR10G8Q8NGN5 311 aa10.59□□□□□ -0.71
HDLBP-223ENST00000449864 DAZ3Q9NR90 486 aaKnown RBP10.59□□□□□ -0.71
HDLBP-223ENST00000449864 A0A087WX48 190 aa10.58□□□□□ -0.72
HDLBP-223ENST00000449864 TRAV8-3A0A0A6YYJ7 113 aa10.58□□□□□ -0.72
HDLBP-223ENST00000449864 MAPKAPK5-AS1Q8N8E1 139 aa10.58□□□□□ -0.72
HDLBP-223ENST00000449864 NEXN-AS1Q8NBZ9 246 aa10.58□□□□□ -0.72
HDLBP-223ENST00000449864 TM2D2Q9BX73 214 aa10.58□□□□□ -0.72
HDLBP-223ENST00000449864 A0A1B0GVG6 124 aa10.57□□□□□ -0.72
HDLBP-223ENST00000449864 F2Z2F3 143 aa10.57□□□□□ -0.72
HDLBP-223ENST00000449864 NIT1Q86X76 327 aa10.57□□□□□ -0.72
HDLBP-223ENST00000449864 RYR1P21817 5038 aa10.56□□□□□ -0.72
HDLBP-223ENST00000449864 LRCOL1A6NCL2 159 aa10.56□□□□□ -0.72
HDLBP-223ENST00000449864 TMEM250H0YL14 139 aa10.56□□□□□ -0.72
HDLBP-223ENST00000449864 CEBPGP53567 150 aa10.56□□□□□ -0.72
HDLBP-223ENST00000449864 NUDT10Q8NFP7 164 aa10.56□□□□□ -0.72
HDLBP-223ENST00000449864 NUDT11Q96G61 164 aa10.56□□□□□ -0.72
HDLBP-223ENST00000449864 RPP21Q9H633 154 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms