RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 NIT1Q86X76 327 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 LYPD1Q8N2G4 141 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 Q8N6K4 173 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 C15orf56Q8N910 161 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 TMEM75Q8N9X5 138 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 BPESC1Q9GZL8 116 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 RABAC1Q9UI14 185 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 ZFP30Q9Y2G7 519 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 PRR14LQ5THK1 2151 aa2.7□□□□□ -1.98
VPS29-202ENST00000447578 SPEGQ15772 3267 aa2.69□□□□□ -1.98
VPS29-202ENST00000447578 IGHV3OR16-8A0A075B7F1 116 aa2.69□□□□□ -1.98
VPS29-202ENST00000447578 TMSB15BA0A087X1C1 80 aa2.69□□□□□ -1.98
VPS29-202ENST00000447578 A0A096LNJ9 63 aa2.69□□□□□ -1.98
VPS29-202ENST00000447578 TMEM189A5PLL7 270 aa2.69□□□□□ -1.98
VPS29-202ENST00000447578 C19orf84I3L1E1 186 aa2.69□□□□□ -1.98
VPS29-202ENST00000447578 NPFFO15130 113 aa2.69□□□□□ -1.98
VPS29-202ENST00000447578 NDUFS5O43920 106 aa2.69□□□□□ -1.98
VPS29-202ENST00000447578 SH2D1AO60880 128 aa2.69□□□□□ -1.98
VPS29-202ENST00000447578 RPL7P18124 248 aaKnown RBP2.69□□□□□ -1.98
VPS29-202ENST00000447578 S100A7P31151 101 aa2.69□□□□□ -1.98
VPS29-202ENST00000447578 CRIP1P50238 77 aa2.69□□□□□ -1.98
VPS29-202ENST00000447578 PSG9Q00887 426 aa2.69□□□□□ -1.98
VPS29-202ENST00000447578 PMCHL1Q16048 86 aa2.69□□□□□ -1.98
VPS29-202ENST00000447578 BATFQ16520 125 aa2.69□□□□□ -1.98
VPS29-202ENST00000447578 SPATA45Q537H7 98 aa2.69□□□□□ -1.98
VPS29-202ENST00000447578 FAM162BQ5T6X4 162 aa2.69□□□□□ -1.98
VPS29-202ENST00000447578 ATOH7Q8N100 152 aa2.69□□□□□ -1.98
VPS29-202ENST00000447578 ITLN2Q8WWU7 325 aaPredicted RBP2.69□□□□□ -1.98
VPS29-202ENST00000447578 ZC2HC1AQ96GY0 325 aa2.69□□□□□ -1.98
VPS29-202ENST00000447578 MIEN1Q9BRT3 115 aa2.69□□□□□ -1.98
VPS29-202ENST00000447578 SNHG12Q9BXW3 62 aa2.69□□□□□ -1.98
VPS29-202ENST00000447578 TANC2Q9HCD6 1990 aa2.69□□□□□ -1.98
VPS29-202ENST00000447578 INTS1Q8N201 2190 aaKnown RBP2.68□□□□□ -1.98
VPS29-202ENST00000447578 PRUNE2Q8WUY3 3088 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 VCANP13611 3396 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 LOC102724200A0A096LPH7 203 aaPredicted RBP2.68□□□□□ -1.98
VPS29-202ENST00000447578 IGHV3-49A0A0A0MS15 119 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.68□□□□□ -1.98
VPS29-202ENST00000447578 A0A0U1RQV1 116 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 CENPVL3A0A0U1RRI6 287 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 A0A1B0GUT8 65 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 G3V318 75 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 M0QZK8 103 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 TCAPO15273 167 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 CRXO43186 299 aaPredicted RBP2.68□□□□□ -1.98
VPS29-202ENST00000447578 CTSGP08311 255 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 ARMS2P0C7Q2 107 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 ZNF688P0C7X2 276 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 LINC00614P0C842 121 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 HLA-DMBP28068 263 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 PSMB2P49721 201 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 RHOGP84095 191 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 PDE6HQ13956 83 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 SAPCD1Q5SSQ6 148 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 EBLN2Q6P2I7 272 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 CLEC19AQ6UXS0 136 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 MRPL52Q86TS9 123 aaKnown RBP2.68□□□□□ -1.98
VPS29-202ENST00000447578 BOD1L2Q8IYS8 172 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 ZNF738Q8NE65 137 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 Q8TAT8 98 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 CHCHD1Q96BP2 118 aaKnown RBP2.68□□□□□ -1.98
VPS29-202ENST00000447578 C18orf15Q96N68 181 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 METTL26Q96S19 204 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 NDFIP1Q9BT67 221 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 UQCR10Q9UDW1 63 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 TIMM8BQ9Y5J9 83 aaPredicted RBP2.68□□□□□ -1.98
VPS29-202ENST00000447578 CACNA1GO43497 2377 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 KNTC1P50748 2209 aa2.68□□□□□ -1.98
VPS29-202ENST00000447578 OTOGLQ3ZCN5 2332 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 IGHV1-24A0A0C4DH33 117 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 MUC21A0A0G2JKD1 596 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 MUC21A0A140T8X8 626 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 LOC389332A0A1B0GUA5 103 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 C20orf202A1L168 122 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 TMEM213A2RRL7 107 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 C2orf70A6NJV1 201 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 SYS1-DBNDD2H3BUS1 97 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 M0QXV9 152 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 ZNF207O43670 478 aaKnown RBP2.67□□□□□ -1.98
VPS29-202ENST00000447578 LEPROTL1O95214 131 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 G0S2P27469 103 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 RPS20P60866 119 aaKnown RBP2.67□□□□□ -1.98
VPS29-202ENST00000447578 ATP5G2Q06055 141 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 DEFB116Q30KQ4 102 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 Q6AWC8 147 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 LYZL1Q6UWQ5 148 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 FA2HQ7L5A8 372 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 SPATA12Q7Z6I5 190 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 C5orf56Q8N8D9 126 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 GATD1Q8NB37 220 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 CCL19Q99731 98 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 TMEM70Q9BUB7 260 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 HSPB8Q9UJY1 196 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 CACNA1DQ01668 2161 aa2.67□□□□□ -1.98
VPS29-202ENST00000447578 YLPM1P49750 1951 aaKnown RBP2.67□□□□□ -1.98
VPS29-202ENST00000447578 HEATR1Q9H583 2144 aaKnown RBP2.66□□□□□ -1.98
VPS29-202ENST00000447578 DSCAML1Q8TD84 2053 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 NCOR1O75376 2440 aa2.66□□□□□ -1.98
VPS29-202ENST00000447578 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms