RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 J3QRE1 110 aa3.43□□□□□ -1.86
HMGB3P9-201ENST00000441799 ZNHIT1O43257 154 aa3.43□□□□□ -1.86
HMGB3P9-201ENST00000441799 LTAP01374 205 aa3.43□□□□□ -1.86
HMGB3P9-201ENST00000441799 PRM2P04554 102 aa3.43□□□□□ -1.86
HMGB3P9-201ENST00000441799 CISD3P0C7P0 127 aa3.43□□□□□ -1.86
HMGB3P9-201ENST00000441799 FUSP35637 526 aaKnown RBP eCLIP3.43□□□□□ -1.86
HMGB3P9-201ENST00000441799 RHOHQ15669 191 aa3.43□□□□□ -1.86
HMGB3P9-201ENST00000441799 LPAL2Q16609 132 aa3.43□□□□□ -1.86
HMGB3P9-201ENST00000441799 DEFB134Q4QY38 66 aa3.43□□□□□ -1.86
HMGB3P9-201ENST00000441799 IGFL3Q6UXB1 125 aa3.43□□□□□ -1.86
HMGB3P9-201ENST00000441799 NDUFA11Q86Y39 141 aa3.43□□□□□ -1.86
HMGB3P9-201ENST00000441799 LINC01555Q8NAE3 123 aa3.43□□□□□ -1.86
HMGB3P9-201ENST00000441799 ZNRF1Q8ND25 227 aa3.43□□□□□ -1.86
HMGB3P9-201ENST00000441799 C11orf52Q96A22 123 aa3.43□□□□□ -1.86
HMGB3P9-201ENST00000441799 ZNF714Q96N38 554 aa3.43□□□□□ -1.86
HMGB3P9-201ENST00000441799 HIST1H4GQ99525 98 aa3.43□□□□□ -1.86
HMGB3P9-201ENST00000441799 TTTY10Q9BZA0 68 aa3.43□□□□□ -1.86
HMGB3P9-201ENST00000441799 EXPH5Q8NEV8 1989 aa3.43□□□□□ -1.86
HMGB3P9-201ENST00000441799 PIEZO2Q9H5I5 2752 aa3.43□□□□□ -1.86
HMGB3P9-201ENST00000441799 OBSL1O75147 1896 aa3.43□□□□□ -1.86
HMGB3P9-201ENST00000441799 MYO18BQ8IUG5 2567 aa3.43□□□□□ -1.86
HMGB3P9-201ENST00000441799 AKAP13Q12802 2813 aa3.43□□□□□ -1.86
HMGB3P9-201ENST00000441799 KIAA1671Q9BY89 1806 aa3.42□□□□□ -1.86
HMGB3P9-201ENST00000441799 TRBV7-1A0A0A6YYK4 115 aa3.42□□□□□ -1.86
HMGB3P9-201ENST00000441799 A0A1B0GWA3 101 aa3.42□□□□□ -1.86
HMGB3P9-201ENST00000441799 CRYM-AS1A6NIL9 109 aa3.42□□□□□ -1.86
HMGB3P9-201ENST00000441799 LINC01565O15544 149 aa3.42□□□□□ -1.86
HMGB3P9-201ENST00000441799 IFI6P09912 130 aa3.42□□□□□ -1.86
HMGB3P9-201ENST00000441799 GNLYP22749 145 aa3.42□□□□□ -1.86
HMGB3P9-201ENST00000441799 MT3P25713 68 aa3.42□□□□□ -1.86
HMGB3P9-201ENST00000441799 XCL1P47992 114 aa3.42□□□□□ -1.86
HMGB3P9-201ENST00000441799 UBE2D1P51668 147 aa3.42□□□□□ -1.86
HMGB3P9-201ENST00000441799 ZNF138P52744 262 aa3.42□□□□□ -1.86
HMGB3P9-201ENST00000441799 SERF2P84101 59 aa3.42□□□□□ -1.86
HMGB3P9-201ENST00000441799 CIRBPQ14011 172 aaKnown RBP3.42□□□□□ -1.86
HMGB3P9-201ENST00000441799 ASB16-AS1Q495Z4 193 aa3.42□□□□□ -1.86
HMGB3P9-201ENST00000441799 ZNF843Q8N446 348 aa3.42□□□□□ -1.86
HMGB3P9-201ENST00000441799 ZNF491Q8N8L2 437 aa3.42□□□□□ -1.86
HMGB3P9-201ENST00000441799 ITLN1Q8WWA0 313 aa3.42□□□□□ -1.86
HMGB3P9-201ENST00000441799 ITLN2Q8WWU7 325 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P9-201ENST00000441799 TMEM190Q8WZ59 177 aa3.42□□□□□ -1.86
HMGB3P9-201ENST00000441799 WFDC6Q9BQY6 131 aa3.42□□□□□ -1.86
HMGB3P9-201ENST00000441799 KLK13Q9UKR3 277 aa3.42□□□□□ -1.86
HMGB3P9-201ENST00000441799 MYOFQ9NZM1 2061 aa3.42□□□□□ -1.86
HMGB3P9-201ENST00000441799 TEP1Q99973 2627 aaKnown RBP3.41□□□□□ -1.86
HMGB3P9-201ENST00000441799 TET1Q8NFU7 2136 aa3.41□□□□□ -1.86
HMGB3P9-201ENST00000441799 TRBV7-3A0A075B6L6 115 aa3.41□□□□□ -1.86
HMGB3P9-201ENST00000441799 IGKV1D-17A0A075B6S4 117 aa3.41□□□□□ -1.86
HMGB3P9-201ENST00000441799 IGHV3OR16-13A0A075B7E8 117 aa3.41□□□□□ -1.86
HMGB3P9-201ENST00000441799 A0A0B4J2C4 111 aa3.41□□□□□ -1.86
HMGB3P9-201ENST00000441799 CRIP2P52943 208 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P9-201ENST00000441799 RBM3P98179 157 aaKnown RBP3.41□□□□□ -1.86
HMGB3P9-201ENST00000441799 ESRGQ1W209 222 aa3.41□□□□□ -1.86
HMGB3P9-201ENST00000441799 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P9-201ENST00000441799 PATE2Q6UY27 113 aa3.41□□□□□ -1.86
HMGB3P9-201ENST00000441799 SCXQ7RTU7 201 aa3.41□□□□□ -1.86
HMGB3P9-201ENST00000441799 C17orf82Q86X59 251 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P9-201ENST00000441799 NUP37Q8NFH4 326 aa3.41□□□□□ -1.86
HMGB3P9-201ENST00000441799 ZNF706Q9Y5V0 76 aaPredicted RBP3.41□□□□□ -1.86
HMGB3P9-201ENST00000441799 KIAA1549LQ6ZVL6 1849 aa3.41□□□□□ -1.86
HMGB3P9-201ENST00000441799 CELSR3Q9NYQ7 3312 aa3.41□□□□□ -1.86
HMGB3P9-201ENST00000441799 TRBV25-1A0A075B6N4 114 aa3.4□□□□□ -1.87
HMGB3P9-201ENST00000441799 TRGV8A0A0C4DH27 118 aa3.4□□□□□ -1.87
HMGB3P9-201ENST00000441799 A0A1B0GW54 56 aa3.4□□□□□ -1.87
HMGB3P9-201ENST00000441799 H0YGG7 62 aa3.4□□□□□ -1.87
HMGB3P9-201ENST00000441799 ATP6V0E1O15342 81 aa3.4□□□□□ -1.87
HMGB3P9-201ENST00000441799 CD28P10747 220 aa3.4□□□□□ -1.87
HMGB3P9-201ENST00000441799 KRTAP10-5P60370 271 aa3.4□□□□□ -1.87
HMGB3P9-201ENST00000441799 RBMY1FQ15415 496 aaKnown RBP3.4□□□□□ -1.87
HMGB3P9-201ENST00000441799 KISS1Q15726 138 aa3.4□□□□□ -1.87
HMGB3P9-201ENST00000441799 VMO1Q7Z5L0 202 aa3.4□□□□□ -1.87
HMGB3P9-201ENST00000441799 CCL4L1Q8NHW4 92 aa3.4□□□□□ -1.87
HMGB3P9-201ENST00000441799 PHF3Q92576 2039 aaKnown RBP3.4□□□□□ -1.87
HMGB3P9-201ENST00000441799 ZNF524Q96C55 264 aa3.4□□□□□ -1.87
HMGB3P9-201ENST00000441799 URB1-AS1Q96HZ7 61 aa3.4□□□□□ -1.87
HMGB3P9-201ENST00000441799 FAM218AQ96MZ4 157 aa3.4□□□□□ -1.87
HMGB3P9-201ENST00000441799 COL12A1Q99715 3063 aa3.4□□□□□ -1.87
HMGB3P9-201ENST00000441799 C11orf1Q9H5F2 150 aa3.4□□□□□ -1.87
HMGB3P9-201ENST00000441799 ZNF462Q96JM2 2506 aa3.4□□□□□ -1.87
HMGB3P9-201ENST00000441799 POLEQ07864 2286 aa3.4□□□□□ -1.87
HMGB3P9-201ENST00000441799 TRPM6Q9BX84 2022 aa3.39□□□□□ -1.87
HMGB3P9-201ENST00000441799 GOLGA4Q13439 2230 aaKnown RBP3.39□□□□□ -1.87
HMGB3P9-201ENST00000441799 PEX7O00628 323 aa3.39□□□□□ -1.87
HMGB3P9-201ENST00000441799 IGKV1-16P04430 117 aa3.39□□□□□ -1.87
HMGB3P9-201ENST00000441799 SAA1P0DJI8 122 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P9-201ENST00000441799 PLA2G2AP14555 144 aa3.39□□□□□ -1.87
HMGB3P9-201ENST00000441799 FGF12P61328 243 aa3.39□□□□□ -1.87
HMGB3P9-201ENST00000441799 MRPL51Q4U2R6 128 aaKnown RBP3.39□□□□□ -1.87
HMGB3P9-201ENST00000441799 Q6JHZ5 121 aa3.39□□□□□ -1.87
HMGB3P9-201ENST00000441799 LINC00173Q6ZV60 143 aa3.39□□□□□ -1.87
HMGB3P9-201ENST00000441799 FAM223AQ8IWN6 122 aa3.39□□□□□ -1.87
HMGB3P9-201ENST00000441799 FAM216BQ8N7L0 139 aa3.39□□□□□ -1.87
HMGB3P9-201ENST00000441799 DAND5Q8N907 189 aa3.39□□□□□ -1.87
HMGB3P9-201ENST00000441799 FGF22Q9HCT0 170 aa3.39□□□□□ -1.87
HMGB3P9-201ENST00000441799 OSTCQ9NRP0 149 aa3.39□□□□□ -1.87
HMGB3P9-201ENST00000441799 UBR5O95071 2799 aaPredicted RBP3.39□□□□□ -1.87
HMGB3P9-201ENST00000441799 HEATR5BQ9P2D3 2071 aa3.39□□□□□ -1.87
HMGB3P9-201ENST00000441799 MYO9AB2RTY4 2548 aa3.38□□□□□ -1.87
HMGB3P9-201ENST00000441799 TMSB15BA0A087X1C1 80 aa3.38□□□□□ -1.87
HMGB3P9-201ENST00000441799 IGLV9-49A0A0B4J1Y8 123 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms