RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 RPRMLQ8N4K4 120 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 SPTSSAQ969W0 71 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 DOCK10Q96BY6 2186 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 ODF3Q96PU9 254 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 TRBV25-1A0A075B6N4 114 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 TRAV2A0A0B4J234 112 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 IGKV1-9A0A0C4DH69 117 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 PMS2P5A8MQ11 134 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 M0R135 149 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 IGHV3-43DP0DP04 118 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 HLA-DMBP28068 263 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 TMEM155Q4W5P6 130 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 Q6ZR03 302 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 SCXQ7RTU7 201 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 DEFB123Q8N688 67 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 ZNF492Q9P255 531 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 WDFY3Q8IZQ1 3526 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 TECTAO75443 2155 aa4.28□□□□□ -1.72
ALMS1-IT1-201ENST00000441587 BUB1B-PAK6H3BSN5 160 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 HBDP02042 147 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 UBE2D3P61077 147 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 UBE2D2P62837 147 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 CXCL6P80162 114 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 ZC2HC1BQ5TFG8 222 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 FAM27BQ5VT28 67 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 C9orf47Q6ZRZ4 202 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 Q8N7P7 452 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 MYOZ3Q8TDC0 251 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 VSIG2Q96IQ7 327 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 INS-IGF2F8WCM5 200 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 IGLV3-1P01715 115 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 PRM2P04554 102 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 CD7P09564 240 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 LPAL2Q16609 132 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 ADAMTSL4-AS1Q5T5F5 129 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 MIC13Q5XKP0 118 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 ZNF414Q96IQ9 312 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 LINC01600Q96MT4 127 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 ZNF714Q96N38 554 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 DOCK7Q96N67 2140 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 CCL28Q9NRJ3 127 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 TMEM167BQ9NRX6 74 aa4.27□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 DMDP11532 3685 aa4.26□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 MYMXA0A1B0GTQ4 84 aa4.26□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 TCL1BO95988 128 aa4.26□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 NPYP01303 97 aa4.26□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 LTAP01374 205 aa4.26□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 DEFA4P12838 97 aa4.26□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 EDDM3BP56851 147 aa4.26□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 PCBD1P61457 104 aa4.26□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 RSPO1Q2MKA7 263 aaPredicted RBP4.26□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 REG3GQ6UW15 175 aa4.26□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 DPH3P1Q9H4G8 78 aa4.26□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 WDFY4Q6ZS81 3184 aa4.26□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 FAM186AA6NE01 2351 aa4.26□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 DNAJC13O75165 2243 aa4.26□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 BDP1A6H8Y1 2624 aa4.25□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 IGLV4-3A0A075B6K6 122 aa4.25□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 TRBV7-3A0A075B6L6 115 aa4.25□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 RPL37AP8A6NKH3 93 aa4.25□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 HIGD1CA8MV81 97 aa4.25□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 ZNF876PQ49A33 203 aa4.25□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 LINC01554Q52M75 96 aa4.25□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 AMN1Q8IY45 258 aa4.25□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 HHLA3Q9XRX5 114 aa4.25□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 MUC3AQ02505 3323 aa4.25□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 TANC2Q9HCD6 1990 aa4.25□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 GPR179Q6PRD1 2367 aa4.25□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.25□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 K7EM74 188 aa4.25□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 IGKV1-39P01597 117 aa4.25□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 IGKV1D-39P04432 117 aa4.25□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 PDPNQ86YL7 162 aa4.25□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 POM121L12Q8N7R1 296 aa4.25□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 ZNF355PQ9NSJ1 428 aa4.25□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 LINC00588Q9Y4M8 146 aa4.25□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 TIMM8BQ9Y5J9 83 aaPredicted RBP4.25□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 FREM1Q5H8C1 2179 aa4.25□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 ZNF407Q9C0G0 2248 aa4.24□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 IGKCP01834 107 aa4.24□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 ZNF32P17041 273 aa4.24□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 C7orf65Q6ZTY9 151 aa4.24□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 IFI27L1Q96BM0 104 aa4.24□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 OPRPNQ99935 248 aaPredicted RBP4.24□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 GFRA4Q9GZZ7 299 aa4.24□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 COL27A1Q8IZC6 1860 aaPredicted RBP4.24□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 IGKV2D-26A0A0A0MRZ7 120 aa4.24□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 IGHV7-81A0A0B4J1V7 117 aa4.24□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 LOC107984156A0A0G2JMH3 177 aa4.24□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 H3BVH4 76 aa4.24□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 MRPL33O75394 65 aaKnown RBP4.24□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 PATE4P0C8F1 98 aa4.24□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 SPINK14Q6IE38 97 aa4.24□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 ARL17AQ8IVW1 177 aa4.24□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 TMEM105Q8N8V8 129 aa4.24□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 TMEM190Q8WZ59 177 aa4.24□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 MED13Q9UHV7 2174 aa4.23□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 URB1O60287 2271 aaKnown RBP4.23□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 SHANK1Q9Y566 2161 aa4.23□□□□□ -1.73
ALMS1-IT1-201ENST00000441587 FREM2Q5SZK8 3169 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms