RNA–Protein interactions for RNA: ENST00000438661.2

KCNC4-204, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNC4, Length 2,953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-204ENST00000438661 RNASE4P34096 147 aaKnown RBP13.68□□□□□ -0.22
KCNC4-204ENST00000438661 ATXN8Q156A1 80 aa13.67□□□□□ -0.22
KCNC4-204ENST00000438661 LINC01560Q8TB33 94 aa13.67□□□□□ -0.22
KCNC4-204ENST00000438661 DUX3Q96PT4 197 aa13.67□□□□□ -0.22
KCNC4-204ENST00000438661 B9A039 149 aa13.67□□□□□ -0.22
KCNC4-204ENST00000438661 ZFAND3Q9H8U3 227 aa13.67□□□□□ -0.22
KCNC4-204ENST00000438661 A0A087WWL8 130 aa13.66□□□□□ -0.22
KCNC4-204ENST00000438661 NPC2P61916 151 aa13.66□□□□□ -0.22
KCNC4-204ENST00000438661 FOXC1Q12948 553 aa13.66□□□□□ -0.22
KCNC4-204ENST00000438661 TMEM263Q8WUH6 116 aaKnown RBP13.66□□□□□ -0.22
KCNC4-204ENST00000438661 ZNF256Q9Y2P7 627 aaPredicted RBP13.66□□□□□ -0.22
KCNC4-204ENST00000438661 H3BMM0 161 aa13.66□□□□□ -0.22
KCNC4-204ENST00000438661 C2orf82Q6UX34 121 aa13.66□□□□□ -0.22
KCNC4-204ENST00000438661 UBE2WQ96B02 151 aa13.66□□□□□ -0.22
KCNC4-204ENST00000438661 ZFHX3Q15911 3703 aa13.66□□□□□ -0.22
KCNC4-204ENST00000438661 CLPSL1A2RUU4 121 aa13.65□□□□□ -0.22
KCNC4-204ENST00000438661 CD3EP07766 207 aa13.65□□□□□ -0.22
KCNC4-204ENST00000438661 ZNF580Q9UK33 172 aa13.65□□□□□ -0.22
KCNC4-204ENST00000438661 RPL11P62913 178 aaKnown RBP13.65□□□□□ -0.22
KCNC4-204ENST00000438661 PAPPA-AS1Q5QFB9 102 aa13.65□□□□□ -0.22
KCNC4-204ENST00000438661 GPHB5Q86YW7 130 aa13.65□□□□□ -0.22
KCNC4-204ENST00000438661 ANKHD1Q8IWZ3 2542 aaKnown RBP13.65□□□□□ -0.22
KCNC4-204ENST00000438661 CENPVL3A0A0U1RRI6 287 aa13.64□□□□□ -0.23
KCNC4-204ENST00000438661 IGIPA6NJ69 53 aa13.64□□□□□ -0.23
KCNC4-204ENST00000438661 F6UB75 175 aa13.64□□□□□ -0.23
KCNC4-204ENST00000438661 C9orf47Q6ZRZ4 202 aa13.64□□□□□ -0.23
KCNC4-204ENST00000438661 OR10J6PQ8NGY7 276 aa13.64□□□□□ -0.23
KCNC4-204ENST00000438661 C20orf173Q96LM9 149 aa13.64□□□□□ -0.23
KCNC4-204ENST00000438661 METTL26Q96S19 204 aa13.64□□□□□ -0.23
KCNC4-204ENST00000438661 G3V318 75 aa13.64□□□□□ -0.23
KCNC4-204ENST00000438661 FAM74A4Q5TZK3 123 aa13.64□□□□□ -0.23
KCNC4-204ENST00000438661 AMELXQ99217 191 aa13.64□□□□□ -0.23
KCNC4-204ENST00000438661 IGHV7-81A0A0B4J1V7 117 aa13.63□□□□□ -0.23
KCNC4-204ENST00000438661 TRIAP1O43715 76 aa13.63□□□□□ -0.23
KCNC4-204ENST00000438661 MUC4Q99102 2169 aa13.63□□□□□ -0.23
KCNC4-204ENST00000438661 Q6ZSV7 163 aa13.63□□□□□ -0.23
KCNC4-204ENST00000438661 PTPRZ1P23471 2315 aaPredicted RBP13.62□□□□□ -0.23
KCNC4-204ENST00000438661 GRNP28799 593 aaKnown RBP13.62□□□□□ -0.23
KCNC4-204ENST00000438661 PPDPFQ9H3Y8 114 aa13.62□□□□□ -0.23
KCNC4-204ENST00000438661 COL6A6A6NMZ7 2263 aa13.61□□□□□ -0.23
KCNC4-204ENST00000438661 TLN1Q9Y490 2541 aaKnown RBP13.61□□□□□ -0.23
KCNC4-204ENST00000438661 TRAV21A0A0B4J279 112 aa13.61□□□□□ -0.23
KCNC4-204ENST00000438661 LGALS9O00182 355 aa13.61□□□□□ -0.23
KCNC4-204ENST00000438661 CLEC2BQ92478 149 aa13.61□□□□□ -0.23
KCNC4-204ENST00000438661 LINC00527Q9UJ94 153 aa13.61□□□□□ -0.23
KCNC4-204ENST00000438661 TRBV10-2A0A0K0K1G8 114 aa13.6□□□□□ -0.23
KCNC4-204ENST00000438661 ZFAND2AQ8N6M9 145 aa13.6□□□□□ -0.23
KCNC4-204ENST00000438661 CCDC140Q96MF4 163 aa13.6□□□□□ -0.23
KCNC4-204ENST00000438661 SDHAF1A6NFY7 115 aa13.59□□□□□ -0.23
KCNC4-204ENST00000438661 ATP6V0E1O15342 81 aa13.59□□□□□ -0.23
KCNC4-204ENST00000438661 ZNF876PQ49A33 203 aa13.59□□□□□ -0.23
KCNC4-204ENST00000438661 Q6Q795 121 aa13.59□□□□□ -0.23
KCNC4-204ENST00000438661 P0DMU3 169 aa13.58□□□□□ -0.24
KCNC4-204ENST00000438661 FAM231AP0DMU4 169 aa13.58□□□□□ -0.24
KCNC4-204ENST00000438661 FAM231CP0DMU5 169 aa13.58□□□□□ -0.24
KCNC4-204ENST00000438661 SPXQ9BT56 116 aa13.58□□□□□ -0.24
KCNC4-204ENST00000438661 CEP295Q9C0D2 2601 aa13.58□□□□□ -0.24
KCNC4-204ENST00000438661 SORL1Q92673 2214 aa13.58□□□□□ -0.24
KCNC4-204ENST00000438661 H7C423 109 aa13.58□□□□□ -0.24
KCNC4-204ENST00000438661 RNASE3P12724 160 aaKnown RBP13.58□□□□□ -0.24
KCNC4-204ENST00000438661 ID1P41134 155 aa13.58□□□□□ -0.24
KCNC4-204ENST00000438661 SUMO4Q6EEV6 95 aa13.58□□□□□ -0.24
KCNC4-204ENST00000438661 LY6G5BQ8NDX9 201 aa13.58□□□□□ -0.24
KCNC4-204ENST00000438661 CELSR1Q9NYQ6 3014 aa13.58□□□□□ -0.24
KCNC4-204ENST00000438661 ZNF22P17026 224 aaPredicted RBP13.57□□□□□ -0.24
KCNC4-204ENST00000438661 UBE2E1P51965 193 aa13.57□□□□□ -0.24
KCNC4-204ENST00000438661 VMO1Q7Z5L0 202 aa13.57□□□□□ -0.24
KCNC4-204ENST00000438661 A0A0B4J2C4 111 aa13.57□□□□□ -0.24
KCNC4-204ENST00000438661 TNFRSF18Q9Y5U5 241 aa13.57□□□□□ -0.24
KCNC4-204ENST00000438661 PRRC2AP48634 2157 aaKnown RBP13.57□□□□□ -0.24
KCNC4-204ENST00000438661 MAP1AP78559 2803 aaPredicted RBP13.57□□□□□ -0.24
KCNC4-204ENST00000438661 IGHV1-69DA0A0B4J2H0 117 aa13.56□□□□□ -0.24
KCNC4-204ENST00000438661 A0A0J9YXV3 536 aa13.56□□□□□ -0.24
KCNC4-204ENST00000438661 VCYO14598 125 aa13.56□□□□□ -0.24
KCNC4-204ENST00000438661 PPP1R17O96001 155 aa13.56□□□□□ -0.24
KCNC4-204ENST00000438661 TMEM141Q96I45 108 aa13.56□□□□□ -0.24
KCNC4-204ENST00000438661 SPTAN1Q13813 2472 aaKnown RBP13.56□□□□□ -0.24
KCNC4-204ENST00000438661 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.56□□□□□ -0.24
KCNC4-204ENST00000438661 RPL13AP40429 203 aaKnown RBP13.56□□□□□ -0.24
KCNC4-204ENST00000438661 COL12A1Q99715 3063 aa13.55□□□□□ -0.24
KCNC4-204ENST00000438661 TMEM95Q3KNT9 176 aa13.55□□□□□ -0.24
KCNC4-204ENST00000438661 VPREB3Q9UKI3 123 aa13.55□□□□□ -0.24
KCNC4-204ENST00000438661 TRAV8-3A0A0A6YYJ7 113 aa13.54□□□□□ -0.24
KCNC4-204ENST00000438661 FAM236AA0A1B0GUQ0 79 aa13.54□□□□□ -0.24
KCNC4-204ENST00000438661 FAM236BA0A1B0GV22 79 aa13.54□□□□□ -0.24
KCNC4-204ENST00000438661 LEPROTO15243 131 aa13.54□□□□□ -0.24
KCNC4-204ENST00000438661 POLR2KP53803 58 aaKnown RBP13.54□□□□□ -0.24
KCNC4-204ENST00000438661 Q8N9W7 124 aa13.54□□□□□ -0.24
KCNC4-204ENST00000438661 TRGV11A0A075B6L2 103 aa13.54□□□□□ -0.24
KCNC4-204ENST00000438661 M0R2P5 195 aa13.54□□□□□ -0.24
KCNC4-204ENST00000438661 TMEM223A0PJW6 202 aa13.53□□□□□ -0.24
KCNC4-204ENST00000438661 M0QXV9 152 aa13.53□□□□□ -0.24
KCNC4-204ENST00000438661 TIMM17AQ99595 171 aa13.53□□□□□ -0.24
KCNC4-204ENST00000438661 MDFICQ9P1T7 246 aa13.53□□□□□ -0.24
KCNC4-204ENST00000438661 ICOSQ9Y6W8 199 aa13.53□□□□□ -0.24
KCNC4-204ENST00000438661 HRNRQ86YZ3 2850 aaPredicted RBP13.53□□□□□ -0.24
KCNC4-204ENST00000438661 LINC00477Q96M19 166 aa13.53□□□□□ -0.24
KCNC4-204ENST00000438661 A0A0J9YXY3 114 aa13.53□□□□□ -0.24
KCNC4-204ENST00000438661 CREBBPQ92793 2442 aa13.52□□□□□ -0.24
KCNC4-204ENST00000438661 LINC00315P59091 139 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms