RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 CCL4L1Q8NHW4 92 aa1.94□□□□□ -2.1
LSM1P1-201ENST00000438629 OR8B2Q96RD0 313 aa1.94□□□□□ -2.1
LSM1P1-201ENST00000438629 ASXL1Q8IXJ9 1541 aa1.94□□□□□ -2.1
LSM1P1-201ENST00000438629 STRCP1A6NGW2 1772 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 PDCD11Q14690 1871 aaKnown RBP1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 TRPM7Q96QT4 1865 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 SCN8AQ9UQD0 1980 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 NESP48681 1621 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 TRAV14DV4A0A0A6YYC5 116 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 TRAV2A0A0B4J234 112 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 TRAV17A0A0B4J275 112 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 IGKV2-24A0A0C4DH68 120 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 IBA57-AS1B1ANH7 110 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 E7EQL1 145 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 CCL3P10147 92 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 CD24P25063 80 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 CKS2P33552 79 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 DYNLT1P63172 113 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 ZNF117Q03924 483 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 CFAP126Q5VTH2 177 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 ATP11AUNQ6ZP68 121 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 TMEM136Q6ZRR5 245 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 COMMD6Q7Z4G1 85 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 SERP2Q8N6R1 65 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 MUC7Q8TAX7 377 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 NABP2Q9BQ15 211 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 CXCL16Q9H2A7 254 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 ANKRD12Q6UB98 2062 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 ARFGEF1Q9Y6D6 1849 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 HEATR5AQ86XA9 2040 aa1.93□□□□□ -2.1
LSM1P1-201ENST00000438629 CRB1P82279 1406 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 ABCA5Q8WWZ7 1642 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 DSCAMO60469 2012 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 MICAL3Q7RTP6 2002 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 IGKV3D-11A0A0A0MRZ8 115 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 A0A1W2PQD3 144 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 H3BPC8 53 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 CCL16O15467 120 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 PSCAO43653 123 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 CCKP06307 115 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 ASAH2BP0C7U1 165 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 PIPP12273 146 aaPredicted RBP1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 CCL5P13501 91 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 XCL1P47992 114 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 KRTDAPP60985 99 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 RBM3P98179 157 aaKnown RBP1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 RHOHQ15669 191 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 MPV17LQ2QL34 196 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 ASB16-AS1Q495Z4 193 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 S100A7L2Q5SY68 101 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 SMIM5Q71RC9 77 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 ADM2Q7Z4H4 148 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 LINC00304Q8N9R0 145 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 PFN4Q8NHR9 129 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 SMCR5Q8TEV8 140 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 CHCHD1Q96BP2 118 aaKnown RBP1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 ODF3Q96PU9 254 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 TRGV9Q99603 122 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 CYSTM1Q9H1C7 97 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 NXT2Q9NPJ8 142 aaKnown RBP1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 TIMM9Q9Y5J7 89 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 MYO5AQ9Y4I1 1855 aaKnown RBP1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 DSCAML1Q8TD84 2053 aa1.92□□□□□ -2.1
LSM1P1-201ENST00000438629 ZMYM4Q5VZL5 1548 aa1.91□□□□□ -2.1
LSM1P1-201ENST00000438629 ADCY10Q96PN6 1610 aa1.91□□□□□ -2.1
LSM1P1-201ENST00000438629 TNS1Q9HBL0 1735 aaKnown RBP1.91□□□□□ -2.1
LSM1P1-201ENST00000438629 NYNRINQ9P2P1 1898 aaKnown RBP1.91□□□□□ -2.1
LSM1P1-201ENST00000438629 ALS2Q96Q42 1657 aa1.91□□□□□ -2.1
LSM1P1-201ENST00000438629 MAST1Q9Y2H9 1570 aa1.91□□□□□ -2.1
LSM1P1-201ENST00000438629 PTPRMP28827 1452 aa1.91□□□□□ -2.1
LSM1P1-201ENST00000438629 CRYM-AS1A6NIL9 109 aa1.91□□□□□ -2.1
LSM1P1-201ENST00000438629 PIRTP0C851 137 aa1.91□□□□□ -2.1
LSM1P1-201ENST00000438629 SMIM13P0DJ93 91 aa1.91□□□□□ -2.1
LSM1P1-201ENST00000438629 PEBP1P30086 187 aaKnown RBP1.91□□□□□ -2.1
LSM1P1-201ENST00000438629 EFNA4P52798 201 aa1.91□□□□□ -2.1
LSM1P1-201ENST00000438629 C1orf64Q8NEQ6 169 aa1.91□□□□□ -2.1
LSM1P1-201ENST00000438629 RETNLBQ9BQ08 111 aa1.91□□□□□ -2.1
LSM1P1-201ENST00000438629 NHP2Q9NX24 153 aaKnown RBP1.91□□□□□ -2.1
LSM1P1-201ENST00000438629 HIGD1BQ9P298 99 aa1.91□□□□□ -2.1
LSM1P1-201ENST00000438629 EXPH5Q8NEV8 1989 aa1.9□□□□□ -2.1
LSM1P1-201ENST00000438629 PLXNA1Q9UIW2 1896 aa1.9□□□□□ -2.1
LSM1P1-201ENST00000438629 PLCH1Q4KWH8 1693 aa1.9□□□□□ -2.1
LSM1P1-201ENST00000438629 NWD1Q149M9 1564 aa1.9□□□□□ -2.1
LSM1P1-201ENST00000438629 TRPM6Q9BX84 2022 aa1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 AFDNP55196 1824 aaKnown RBP1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 IGKV1D-37A0A075B6S9 117 aa1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 FXYD6-FXYD2A0A087WZ82 144 aa1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 IGHV3-15A0A0B4J1V0 119 aa1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 IGHV1-24A0A0C4DH33 117 aa1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 C16orf90A8MZG2 172 aa1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 F2Z2F3 143 aa1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 CXCL8P10145 99 aa1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 SNRPFP62306 86 aaKnown RBP1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 SUPT4H1P63272 117 aaKnown RBP1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 Q1T7F1 81 aa1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 PYDC2Q56P42 97 aa1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 RPL7L1Q6DKI1 246 aaKnown RBP1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 C2orf91Q6ZV80 131 aa1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 DYNAPQ8N1N2 210 aa1.9□□□□□ -2.11
LSM1P1-201ENST00000438629 TVP23CQ96ET8 276 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms