RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 IGHV3-53P01767 116 aa5.11□□□□□ -1.59
CSDE1-205ENST00000438362 CFC1BP0CG36 223 aa5.11□□□□□ -1.59
CSDE1-205ENST00000438362 CFC1P0CG37 223 aa5.11□□□□□ -1.59
CSDE1-205ENST00000438362 SCGB1A1P11684 91 aa5.11□□□□□ -1.59
CSDE1-205ENST00000438362 UBE2E2Q96LR5 201 aa5.11□□□□□ -1.59
CSDE1-205ENST00000438362 TM2D2Q9BX73 214 aa5.11□□□□□ -1.59
CSDE1-205ENST00000438362 RANBP2P49792 3224 aaKnown RBP5.11□□□□□ -1.59
CSDE1-205ENST00000438362 C11orf86A6NJI1 115 aa5.11□□□□□ -1.59
CSDE1-205ENST00000438362 LGALS1P09382 135 aaKnown RBP5.11□□□□□ -1.59
CSDE1-205ENST00000438362 IGHV4-38-2P0DP08 117 aa5.11□□□□□ -1.59
CSDE1-205ENST00000438362 RPL39P62891 51 aaKnown RBP5.11□□□□□ -1.59
CSDE1-205ENST00000438362 ZNF625Q96I27 306 aaPredicted RBP5.11□□□□□ -1.59
CSDE1-205ENST00000438362 CHCHD5Q9BSY4 110 aa5.1□□□□□ -1.59
CSDE1-205ENST00000438362 MYO9AB2RTY4 2548 aa5.1□□□□□ -1.59
CSDE1-205ENST00000438362 IGHV3-16A0A0C4DH30 117 aa5.1□□□□□ -1.59
CSDE1-205ENST00000438362 RBMY1BA6NDE4 496 aaKnown RBP5.1□□□□□ -1.59
CSDE1-205ENST00000438362 RBMY1EA6NEQ0 496 aaKnown RBP5.1□□□□□ -1.59
CSDE1-205ENST00000438362 H3BMM0 161 aa5.1□□□□□ -1.59
CSDE1-205ENST00000438362 RNASE1P07998 156 aaKnown RBP5.1□□□□□ -1.59
CSDE1-205ENST00000438362 RBMY1DP0C7P1 496 aaKnown RBP5.1□□□□□ -1.59
CSDE1-205ENST00000438362 RBMY1A1P0DJD3 496 aaKnown RBP5.1□□□□□ -1.59
CSDE1-205ENST00000438362 RBMY1CP0DJD4 496 aa5.1□□□□□ -1.59
CSDE1-205ENST00000438362 UBE2WQ96B02 151 aa5.1□□□□□ -1.59
CSDE1-205ENST00000438362 TIMM17AQ99595 171 aa5.1□□□□□ -1.59
CSDE1-205ENST00000438362 C1QTNF4Q9BXJ3 329 aa5.1□□□□□ -1.59
CSDE1-205ENST00000438362 A0A0J9YXV3 536 aa5.1□□□□□ -1.59
CSDE1-205ENST00000438362 MRPS12O15235 138 aaKnown RBP5.1□□□□□ -1.59
CSDE1-205ENST00000438362 LEPROTO15243 131 aa5.1□□□□□ -1.59
CSDE1-205ENST00000438362 TRBV12-3P01733 135 aa5.1□□□□□ -1.59
CSDE1-205ENST00000438362 IGHG2P01859 326 aa5.1□□□□□ -1.59
CSDE1-205ENST00000438362 ELANEP08246 267 aa5.1□□□□□ -1.59
CSDE1-205ENST00000438362 LINC00158P58513 81 aa5.1□□□□□ -1.59
CSDE1-205ENST00000438362 XCL2Q9UBD3 114 aa5.1□□□□□ -1.59
CSDE1-205ENST00000438362 A4D1N5 150 aa5.09□□□□□ -1.59
CSDE1-205ENST00000438362 LMO4P61968 165 aa5.09□□□□□ -1.59
CSDE1-205ENST00000438362 MAPK1IP1LQ8NDC0 245 aa5.09□□□□□ -1.59
CSDE1-205ENST00000438362 NCOR2Q9Y618 2525 aa5.09□□□□□ -1.59
CSDE1-205ENST00000438362 IGHV3-38A0A0C4DH36 116 aa5.09□□□□□ -1.59
CSDE1-205ENST00000438362 K7EMT4 169 aa5.09□□□□□ -1.59
CSDE1-205ENST00000438362 IGHV4-59P01825 116 aa5.09□□□□□ -1.59
CSDE1-205ENST00000438362 CRPP02741 224 aa5.09□□□□□ -1.59
CSDE1-205ENST00000438362 RNASE13Q5GAN3 156 aaKnown RBP5.09□□□□□ -1.59
CSDE1-205ENST00000438362 LAMA2P24043 3122 aaKnown RBP5.09□□□□□ -1.59
CSDE1-205ENST00000438362 PF4P02776 101 aa5.09□□□□□ -1.59
CSDE1-205ENST00000438362 Q71RC1 249 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-205ENST00000438362 TEN1Q86WV5 123 aa5.09□□□□□ -1.59
CSDE1-205ENST00000438362 Q8N6K4 173 aa5.09□□□□□ -1.59
CSDE1-205ENST00000438362 NTN5Q8WTR8 489 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-205ENST00000438362 IGF1P05019 195 aa5.08□□□□□ -1.6
CSDE1-205ENST00000438362 CMC4P56277 68 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-205ENST00000438362 DEFB112Q30KQ8 113 aa5.08□□□□□ -1.6
CSDE1-205ENST00000438362 MAPKAPK5-AS1Q8N8E1 139 aa5.08□□□□□ -1.6
CSDE1-205ENST00000438362 CNFNQ9BYD5 112 aa5.08□□□□□ -1.6
CSDE1-205ENST00000438362 JPT2Q9H910 190 aa5.08□□□□□ -1.6
CSDE1-205ENST00000438362 RNF223E7ERA6 249 aa5.08□□□□□ -1.6
CSDE1-205ENST00000438362 LINC01619G3V211 115 aa5.08□□□□□ -1.6
CSDE1-205ENST00000438362 GAS8-AS1O95177 125 aa5.08□□□□□ -1.6
CSDE1-205ENST00000438362 HOXD3P31249 432 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-205ENST00000438362 Q8N1Y9 231 aa5.08□□□□□ -1.6
CSDE1-205ENST00000438362 ZNRF2Q8NHG8 242 aa5.08□□□□□ -1.6
CSDE1-205ENST00000438362 NEXN-AS1Q8NBZ9 246 aa5.08□□□□□ -1.6
CSDE1-205ENST00000438362 IGHV4-30-2A0A087WSY4 118 aa5.08□□□□□ -1.6
CSDE1-205ENST00000438362 J3QLI3 93 aa5.08□□□□□ -1.6
CSDE1-205ENST00000438362 FOXI1Q12951 378 aa5.08□□□□□ -1.6
CSDE1-205ENST00000438362 GPHB5Q86YW7 130 aa5.08□□□□□ -1.6
CSDE1-205ENST00000438362 ZFAND2AQ8N6M9 145 aa5.08□□□□□ -1.6
CSDE1-205ENST00000438362 PIFOQ8TCI5 191 aa5.08□□□□□ -1.6
CSDE1-205ENST00000438362 C10orf105Q8TEF2 133 aa5.08□□□□□ -1.6
CSDE1-205ENST00000438362 C11orf21Q9P2W6 132 aa5.08□□□□□ -1.6
CSDE1-205ENST00000438362 MUSTN1Q8IVN3 82 aa5.07□□□□□ -1.6
CSDE1-205ENST00000438362 TMEM86BQ8N661 226 aa5.07□□□□□ -1.6
CSDE1-205ENST00000438362 NRACQ8N912 160 aa5.07□□□□□ -1.6
CSDE1-205ENST00000438362 ANKRD11Q6UB99 2663 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-205ENST00000438362 GAGE12JA6NER3 117 aa5.07□□□□□ -1.6
CSDE1-205ENST00000438362 PAX4O43316 350 aa5.07□□□□□ -1.6
CSDE1-205ENST00000438362 GAGE4Q13068 117 aa5.07□□□□□ -1.6
CSDE1-205ENST00000438362 GAGE5Q13069 117 aa5.07□□□□□ -1.6
CSDE1-205ENST00000438362 MRGPRG-AS1Q2M3A8 158 aa5.07□□□□□ -1.6
CSDE1-205ENST00000438362 CFAP161Q6P656 301 aa5.07□□□□□ -1.6
CSDE1-205ENST00000438362 C20orf173Q96LM9 149 aa5.07□□□□□ -1.6
CSDE1-205ENST00000438362 SPAG8Q99932 426 aaPredicted RBP5.07□□□□□ -1.6
CSDE1-205ENST00000438362 A0A096LNJ9 63 aa5.07□□□□□ -1.6
CSDE1-205ENST00000438362 C11orf71Q6IPW1 123 aa5.07□□□□□ -1.6
CSDE1-205ENST00000438362 SPANXA1Q9NS26 97 aa5.07□□□□□ -1.6
CSDE1-205ENST00000438362 ANKRD29Q8N6D5 301 aa5.06□□□□□ -1.6
CSDE1-205ENST00000438362 CARD19Q96LW7 228 aa5.06□□□□□ -1.6
CSDE1-205ENST00000438362 MDFICQ9P1T7 246 aa5.06□□□□□ -1.6
CSDE1-205ENST00000438362 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-205ENST00000438362 IGKV2-29A2NJV5 120 aaPredicted RBP5.06□□□□□ -1.6
CSDE1-205ENST00000438362 PRSS47A8MTI9 375 aa5.06□□□□□ -1.6
CSDE1-205ENST00000438362 NDUFA11Q86Y39 141 aa5.06□□□□□ -1.6
CSDE1-205ENST00000438362 C20orf203Q8NBC4 194 aa5.06□□□□□ -1.6
CSDE1-205ENST00000438362 VPREB3Q9UKI3 123 aa5.06□□□□□ -1.6
CSDE1-205ENST00000438362 TRANK1O15050 2925 aa5.06□□□□□ -1.6
CSDE1-205ENST00000438362 PIEZO1Q92508 2521 aa5.06□□□□□ -1.6
CSDE1-205ENST00000438362 A0A0J9YX75 114 aa5.06□□□□□ -1.6
CSDE1-205ENST00000438362 A6NDX4 124 aa5.06□□□□□ -1.6
CSDE1-205ENST00000438362 RPL35AP18077 110 aaKnown RBP5.06□□□□□ -1.6
CSDE1-205ENST00000438362 HERVK_113P63121 156 aa5.06□□□□□ -1.6
CSDE1-205ENST00000438362 SPANXB1Q9NS25 103 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms