RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 CRIP2P52943 208 aaPredicted RBP12.57□□□□□ -0.4
TTC3-209ENST00000438055 SUMO4Q6EEV6 95 aa12.57□□□□□ -0.4
TTC3-209ENST00000438055 KLHL30-AS1Q8NEE0 82 aa12.57□□□□□ -0.4
TTC3-209ENST00000438055 CRYBG3Q68DQ2 2970 aa12.57□□□□□ -0.4
TTC3-209ENST00000438055 UFSP1Q6NVU6 142 aa12.57□□□□□ -0.4
TTC3-209ENST00000438055 HERVK_113P61574 105 aa12.56□□□□□ -0.4
TTC3-209ENST00000438055 C12orf74Q32Q52 190 aa12.56□□□□□ -0.4
TTC3-209ENST00000438055 APOMO95445 188 aa12.56□□□□□ -0.4
TTC3-209ENST00000438055 MDFICQ9P1T7 246 aa12.56□□□□□ -0.4
TTC3-209ENST00000438055 IGHV3-73A0A0B4J1V6 119 aa12.56□□□□□ -0.4
TTC3-209ENST00000438055 LOC107984156A0A0G2JMH3 177 aa12.55□□□□□ -0.4
TTC3-209ENST00000438055 ARL17AQ8IVW1 177 aa12.55□□□□□ -0.4
TTC3-209ENST00000438055 SYT8Q8NBV8 401 aa12.55□□□□□ -0.4
TTC3-209ENST00000438055 NEXN-AS1Q8NBZ9 246 aa12.55□□□□□ -0.4
TTC3-209ENST00000438055 TRAV12-1A0A0B4J245 112 aa12.55□□□□□ -0.4
TTC3-209ENST00000438055 VCYO14598 125 aa12.55□□□□□ -0.4
TTC3-209ENST00000438055 IGLV1-40P01703 118 aa12.55□□□□□ -0.4
TTC3-209ENST00000438055 MRPL16Q9NX20 251 aaKnown RBP12.55□□□□□ -0.4
TTC3-209ENST00000438055 H3BMG7 143 aa12.54□□□□□ -0.4
TTC3-209ENST00000438055 IGHV3-64A0A075B6Q5 118 aa12.54□□□□□ -0.4
TTC3-209ENST00000438055 PRSS47A8MTI9 375 aa12.54□□□□□ -0.4
TTC3-209ENST00000438055 IGLL5B9A064 214 aa12.54□□□□□ -0.4
TTC3-209ENST00000438055 BEX4Q9NWD9 120 aaPredicted RBP12.54□□□□□ -0.4
TTC3-209ENST00000438055 NACAE9PAV3 2078 aa12.53□□□□□ -0.4
TTC3-209ENST00000438055 ZFP2Q6ZN57 461 aa12.53□□□□□ -0.4
TTC3-209ENST00000438055 TM2D2Q9BX73 214 aa12.53□□□□□ -0.4
TTC3-209ENST00000438055 ZNF876PQ49A33 203 aa12.53□□□□□ -0.4
TTC3-209ENST00000438055 Q8N1Y9 231 aa12.53□□□□□ -0.4
TTC3-209ENST00000438055 DCANP1Q8TF63 244 aa12.52□□□□□ -0.4
TTC3-209ENST00000438055 MUC4Q99102 2169 aa12.52□□□□□ -0.4
TTC3-209ENST00000438055 ZANQ9Y493 2812 aa12.52□□□□□ -0.4
TTC3-209ENST00000438055 HOXA3O43365 443 aaPredicted RBP12.52□□□□□ -0.4
TTC3-209ENST00000438055 C11orf86A6NJI1 115 aa12.52□□□□□ -0.41
TTC3-209ENST00000438055 RNF223E7ERA6 249 aa12.52□□□□□ -0.41
TTC3-209ENST00000438055 DEFB136Q30KP8 78 aa12.52□□□□□ -0.41
TTC3-209ENST00000438055 PGPEP1Q9NXJ5 209 aa12.52□□□□□ -0.41
TTC3-209ENST00000438055 MED14OSP0DP75 135 aa12.51□□□□□ -0.41
TTC3-209ENST00000438055 LINC01356Q8N9X3 169 aa12.51□□□□□ -0.41
TTC3-209ENST00000438055 KLLNB2CW77 178 aa12.51□□□□□ -0.41
TTC3-209ENST00000438055 LGALS1P09382 135 aaKnown RBP12.51□□□□□ -0.41
TTC3-209ENST00000438055 OPRPNQ99935 248 aaPredicted RBP12.51□□□□□ -0.41
TTC3-209ENST00000438055 UTP20O75691 2785 aaKnown RBP12.51□□□□□ -0.41
TTC3-209ENST00000438055 TEX48A0A1B0GUV7 120 aa12.51□□□□□ -0.41
TTC3-209ENST00000438055 K7EMT4 169 aa12.51□□□□□ -0.41
TTC3-209ENST00000438055 IGSF10Q6WRI0 2623 aa12.51□□□□□ -0.41
TTC3-209ENST00000438055 PMVKQ15126 192 aa12.5□□□□□ -0.41
TTC3-209ENST00000438055 IGHV1OR15-1A0A075B7D0 117 aa12.5□□□□□ -0.41
TTC3-209ENST00000438055 SAMD13Q5VXD3 122 aa12.5□□□□□ -0.41
TTC3-209ENST00000438055 TMEM238LA0A1B0GVL6 79 aa12.5□□□□□ -0.41
TTC3-209ENST00000438055 A6NJY4 79 aa12.5□□□□□ -0.41
TTC3-209ENST00000438055 KNCNA6PVL3 124 aa12.5□□□□□ -0.41
TTC3-209ENST00000438055 PRB1P04280 392 aa12.5□□□□□ -0.41
TTC3-209ENST00000438055 PSMB8P28062 276 aa12.5□□□□□ -0.41
TTC3-209ENST00000438055 PLEKHB2Q96CS7 222 aa12.5□□□□□ -0.41
TTC3-209ENST00000438055 IGHV4OR15-8A0A075B7B6 117 aa12.49□□□□□ -0.41
TTC3-209ENST00000438055 A0A087WW49 117 aa12.49□□□□□ -0.41
TTC3-209ENST00000438055 TAL2Q16559 108 aa12.49□□□□□ -0.41
TTC3-209ENST00000438055 ETDBQ3ZM63 59 aa12.49□□□□□ -0.41
TTC3-209ENST00000438055 DUX3Q96PT4 197 aa12.49□□□□□ -0.41
TTC3-209ENST00000438055 E9PLD3 99 aa12.49□□□□□ -0.41
TTC3-209ENST00000438055 HOXD3P31249 432 aaPredicted RBP12.49□□□□□ -0.41
TTC3-209ENST00000438055 WFDC2Q14508 124 aa12.49□□□□□ -0.41
TTC3-209ENST00000438055 A0A0J9YX75 114 aa12.49□□□□□ -0.41
TTC3-209ENST00000438055 LINC01549A6NIU2 74 aa12.48□□□□□ -0.41
TTC3-209ENST00000438055 LGALS3P17931 250 aaKnown RBP12.48□□□□□ -0.41
TTC3-209ENST00000438055 HIST2H2BDQ6DRA6 164 aa12.48□□□□□ -0.41
TTC3-209ENST00000438055 ZFHX3Q15911 3703 aa12.48□□□□□ -0.41
TTC3-209ENST00000438055 CELSR2Q9HCU4 2923 aa12.48□□□□□ -0.41
TTC3-209ENST00000438055 TRBV7-9A0A0J9YWB2 115 aa12.48□□□□□ -0.41
TTC3-209ENST00000438055 COX6B1P14854 86 aa12.48□□□□□ -0.41
TTC3-209ENST00000438055 DEFB131AP59861 70 aa12.48□□□□□ -0.41
TTC3-209ENST00000438055 TCTEX1D4Q5JR98 221 aa12.48□□□□□ -0.41
TTC3-209ENST00000438055 SH2D6Q7Z4S9 175 aa12.48□□□□□ -0.41
TTC3-209ENST00000438055 FAM19A4Q96LR4 140 aa12.48□□□□□ -0.41
TTC3-209ENST00000438055 H7C2G1 150 aa12.47□□□□□ -0.41
TTC3-209ENST00000438055 FOXI2Q6ZQN5 318 aa12.47□□□□□ -0.41
TTC3-209ENST00000438055 A0A1B0GWB2 263 aa12.47□□□□□ -0.41
TTC3-209ENST00000438055 SCGB1C2P0DMR2 95 aa12.47□□□□□ -0.41
TTC3-209ENST00000438055 GATA3P23771 443 aa12.47□□□□□ -0.41
TTC3-209ENST00000438055 RRN3P1Q2M238 152 aa12.47□□□□□ -0.41
TTC3-209ENST00000438055 IGHV3-16A0A0C4DH30 117 aa12.47□□□□□ -0.41
TTC3-209ENST00000438055 J3QR89 54 aa12.47□□□□□ -0.41
TTC3-209ENST00000438055 GAGE13Q4V321 117 aa12.47□□□□□ -0.41
TTC3-209ENST00000438055 PAPPA-AS1Q5QFB9 102 aa12.47□□□□□ -0.41
TTC3-209ENST00000438055 ZNF418Q8TF45 676 aaPredicted RBP12.46□□□□□ -0.42
TTC3-209ENST00000438055 PHLDA1Q8WV24 401 aaPredicted RBP12.46□□□□□ -0.42
TTC3-209ENST00000438055 KIF25-AS1Q9Y6Z4 181 aa12.46□□□□□ -0.42
TTC3-209ENST00000438055 EPG5Q9HCE0 2579 aa12.46□□□□□ -0.42
TTC3-209ENST00000438055 G3V4G9 280 aa12.45□□□□□ -0.42
TTC3-209ENST00000438055 PRM2P04554 102 aa12.45□□□□□ -0.42
TTC3-209ENST00000438055 PSMB2P49721 201 aa12.45□□□□□ -0.42
TTC3-209ENST00000438055 POLR2KP53803 58 aaKnown RBP12.45□□□□□ -0.42
TTC3-209ENST00000438055 DSCR9P59020 149 aa12.45□□□□□ -0.42
TTC3-209ENST00000438055 LINC00315P59091 139 aa12.45□□□□□ -0.42
TTC3-209ENST00000438055 VPS13CQ709C8 3753 aa12.45□□□□□ -0.42
TTC3-209ENST00000438055 SLURP1P55000 103 aa12.45□□□□□ -0.42
TTC3-209ENST00000438055 TRBV7-3A0A075B6L6 115 aa12.45□□□□□ -0.42
TTC3-209ENST00000438055 C11orf44Q8N8P7 122 aa12.45□□□□□ -0.42
TTC3-209ENST00000438055 K7EQG2 157 aa12.44□□□□□ -0.42
TTC3-209ENST00000438055 CFHR3Q02985 330 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms