RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 OVOL2Q9BRP0 275 aa5.76□□□□□ -1.49
CPSF6-202ENST00000435070 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.76□□□□□ -1.49
CPSF6-202ENST00000435070 TRAV12-1A0A0B4J245 112 aa5.76□□□□□ -1.49
CPSF6-202ENST00000435070 NBL1P41271 181 aa5.76□□□□□ -1.49
CPSF6-202ENST00000435070 LINC00158P58513 81 aa5.76□□□□□ -1.49
CPSF6-202ENST00000435070 TNRC18O15417 2968 aaPredicted RBP5.76□□□□□ -1.49
CPSF6-202ENST00000435070 DYNAPQ8N1N2 210 aa5.76□□□□□ -1.49
CPSF6-202ENST00000435070 RASL10AQ92737 203 aa5.76□□□□□ -1.49
CPSF6-202ENST00000435070 TCF15Q12870 199 aa5.75□□□□□ -1.49
CPSF6-202ENST00000435070 LYPD1Q8N2G4 141 aa5.75□□□□□ -1.49
CPSF6-202ENST00000435070 PTPRZ1P23471 2315 aaPredicted RBP5.75□□□□□ -1.49
CPSF6-202ENST00000435070 TEX22C9J3V5 150 aa5.75□□□□□ -1.49
CPSF6-202ENST00000435070 K7EIM0 57 aa5.75□□□□□ -1.49
CPSF6-202ENST00000435070 INAFM2P0DMQ5 153 aa5.75□□□□□ -1.49
CPSF6-202ENST00000435070 ZNF575Q86XF7 245 aa5.75□□□□□ -1.49
CPSF6-202ENST00000435070 VPREB3Q9UKI3 123 aa5.75□□□□□ -1.49
CPSF6-202ENST00000435070 DOPEY2Q9Y3R5 2298 aa5.75□□□□□ -1.49
CPSF6-202ENST00000435070 Q6ZS92 163 aa5.75□□□□□ -1.49
CPSF6-202ENST00000435070 RPL39LQ96EH5 51 aaKnown RBP5.75□□□□□ -1.49
CPSF6-202ENST00000435070 PRO1854Q9UHT4 67 aa5.75□□□□□ -1.49
CPSF6-202ENST00000435070 PAX4O43316 350 aa5.75□□□□□ -1.49
CPSF6-202ENST00000435070 NRACQ8N912 160 aa5.75□□□□□ -1.49
CPSF6-202ENST00000435070 C11orf21Q9P2W6 132 aa5.75□□□□□ -1.49
CPSF6-202ENST00000435070 RAI1Q7Z5J4 1906 aaPredicted RBP5.75□□□□□ -1.49
CPSF6-202ENST00000435070 IGHV3-73A0A0B4J1V6 119 aa5.75□□□□□ -1.49
CPSF6-202ENST00000435070 IGLV1-44P01699 117 aa5.75□□□□□ -1.49
CPSF6-202ENST00000435070 C2orf66Q6UXQ4 117 aa5.74□□□□□ -1.49
CPSF6-202ENST00000435070 CREBBPQ92793 2442 aa5.74□□□□□ -1.49
CPSF6-202ENST00000435070 MRPS12O15235 138 aaKnown RBP5.74□□□□□ -1.49
CPSF6-202ENST00000435070 ELANEP08246 267 aa5.74□□□□□ -1.49
CPSF6-202ENST00000435070 LOC107984640A0A0U1RRK4 108 aa5.74□□□□□ -1.49
CPSF6-202ENST00000435070 A4D1N5 150 aa5.74□□□□□ -1.49
CPSF6-202ENST00000435070 ADARB2-AS1A8MUL3 147 aa5.74□□□□□ -1.49
CPSF6-202ENST00000435070 MDS2Q8NDY4 140 aa5.74□□□□□ -1.49
CPSF6-202ENST00000435070 A0A0J9YY99 117 aa5.74□□□□□ -1.49
CPSF6-202ENST00000435070 hADV29S1A0JD25 119 aa5.74□□□□□ -1.49
CPSF6-202ENST00000435070 PRSS33Q8NF86 280 aa5.74□□□□□ -1.49
CPSF6-202ENST00000435070 SMIM2Q9BVW6 85 aa5.74□□□□□ -1.49
CPSF6-202ENST00000435070 C11orf86A6NJI1 115 aa5.74□□□□□ -1.49
CPSF6-202ENST00000435070 THBDP07204 575 aa5.74□□□□□ -1.49
CPSF6-202ENST00000435070 LYNX1G3V0Z9 82 aa5.74□□□□□ -1.49
CPSF6-202ENST00000435070 IGHG3P01860 377 aa5.74□□□□□ -1.49
CPSF6-202ENST00000435070 LYNX1P0DP58 116 aa5.74□□□□□ -1.49
CPSF6-202ENST00000435070 ODF3Q96PU9 254 aa5.74□□□□□ -1.49
CPSF6-202ENST00000435070 DPM3Q9P2X0 92 aa5.74□□□□□ -1.49
CPSF6-202ENST00000435070 FAM240AA0A1B0GVK7 77 aa5.73□□□□□ -1.49
CPSF6-202ENST00000435070 LINC01559Q495D7 138 aa5.73□□□□□ -1.49
CPSF6-202ENST00000435070 C14orf132Q9NPU4 83 aa5.73□□□□□ -1.49
CPSF6-202ENST00000435070 COL6A6A6NMZ7 2263 aa5.73□□□□□ -1.49
CPSF6-202ENST00000435070 GNLYP22749 145 aa5.73□□□□□ -1.49
CPSF6-202ENST00000435070 C14orf178Q8N769 122 aaPredicted RBP5.73□□□□□ -1.49
CPSF6-202ENST00000435070 DUSP14O95147 198 aaKnown RBP5.73□□□□□ -1.49
CPSF6-202ENST00000435070 C22orf34Q6ZV56 151 aa5.73□□□□□ -1.49
CPSF6-202ENST00000435070 MUC3AQ02505 3323 aa5.73□□□□□ -1.49
CPSF6-202ENST00000435070 PIEZO2Q9H5I5 2752 aa5.73□□□□□ -1.49
CPSF6-202ENST00000435070 CENPVL3A0A0U1RRI6 287 aa5.73□□□□□ -1.49
CPSF6-202ENST00000435070 C1orf195Q5TG92 126 aa5.73□□□□□ -1.49
CPSF6-202ENST00000435070 NEXN-AS1Q8NBZ9 246 aa5.73□□□□□ -1.49
CPSF6-202ENST00000435070 LINC00574Q9H8X3 128 aa5.73□□□□□ -1.49
CPSF6-202ENST00000435070 C21orf62Q9NYP8 219 aa5.73□□□□□ -1.49
CPSF6-202ENST00000435070 LINC00527Q9UJ94 153 aa5.73□□□□□ -1.49
CPSF6-202ENST00000435070 TSPEAR-AS2P59090 65 aa5.72□□□□□ -1.49
CPSF6-202ENST00000435070 PVRIGQ6DKI7 326 aa5.72□□□□□ -1.49
CPSF6-202ENST00000435070 MUSTN1Q8IVN3 82 aa5.72□□□□□ -1.49
CPSF6-202ENST00000435070 RNASE6Q93091 150 aaKnown RBP5.72□□□□□ -1.49
CPSF6-202ENST00000435070 F6UB75 175 aa5.72□□□□□ -1.49
CPSF6-202ENST00000435070 KLK5Q9Y337 293 aaPredicted RBP5.72□□□□□ -1.49
CPSF6-202ENST00000435070 IGHV3-53P01767 116 aa5.72□□□□□ -1.49
CPSF6-202ENST00000435070 C20orf173Q96LM9 149 aa5.72□□□□□ -1.49
CPSF6-202ENST00000435070 RS1O15537 224 aa5.72□□□□□ -1.49
CPSF6-202ENST00000435070 LINC01620Q4KN68 170 aa5.72□□□□□ -1.49
CPSF6-202ENST00000435070 VMO1Q7Z5L0 202 aa5.72□□□□□ -1.49
CPSF6-202ENST00000435070 SBSPONQ8IVN8 264 aa5.72□□□□□ -1.49
CPSF6-202ENST00000435070 LINC00694P0DN24 101 aa5.71□□□□□ -1.49
CPSF6-202ENST00000435070 PDE6HQ13956 83 aa5.71□□□□□ -1.49
CPSF6-202ENST00000435070 ORMDL2Q53FV1 153 aa5.71□□□□□ -1.49
CPSF6-202ENST00000435070 ACACAQ13085 2346 aa5.71□□□□□ -1.49
CPSF6-202ENST00000435070 IGHV1-3A0A0C4DH29 117 aa5.71□□□□□ -1.5
CPSF6-202ENST00000435070 IGHV3-30P01768 117 aa5.71□□□□□ -1.5
CPSF6-202ENST00000435070 IGHG4P01861 327 aa5.71□□□□□ -1.5
CPSF6-202ENST00000435070 IGHV1-8P0DP01 117 aa5.71□□□□□ -1.5
CPSF6-202ENST00000435070 IGHV3-30-5P0DP03 117 aa5.71□□□□□ -1.5
CPSF6-202ENST00000435070 SORL1Q92673 2214 aa5.71□□□□□ -1.5
CPSF6-202ENST00000435070 CD28P10747 220 aa5.71□□□□□ -1.5
CPSF6-202ENST00000435070 TMEM219Q86XT9 240 aa5.71□□□□□ -1.5
CPSF6-202ENST00000435070 SMAD5-AS1Q9Y6J3 95 aa5.71□□□□□ -1.5
CPSF6-202ENST00000435070 LINC01546A6NGU7 62 aa5.71□□□□□ -1.5
CPSF6-202ENST00000435070 OOSP1A8MZH6 123 aa5.71□□□□□ -1.5
CPSF6-202ENST00000435070 AGPAT4-IT1Q9H0P7 198 aa5.71□□□□□ -1.5
CPSF6-202ENST00000435070 LINC01619G3V211 115 aa5.71□□□□□ -1.5
CPSF6-202ENST00000435070 RPL39P62891 51 aaKnown RBP5.71□□□□□ -1.5
CPSF6-202ENST00000435070 TMEM30BQ3MIR4 351 aa5.7□□□□□ -1.5
CPSF6-202ENST00000435070 MPLKIPQ8TAP9 179 aa5.7□□□□□ -1.5
CPSF6-202ENST00000435070 NOTCH3Q9UM47 2321 aa5.7□□□□□ -1.5
CPSF6-202ENST00000435070 NBR2O15453 112 aa5.7□□□□□ -1.5
CPSF6-202ENST00000435070 IGHV3-33P01772 117 aa5.7□□□□□ -1.5
CPSF6-202ENST00000435070 GATA4P43694 442 aa5.7□□□□□ -1.5
CPSF6-202ENST00000435070 CNFNQ9BYD5 112 aa5.7□□□□□ -1.5
CPSF6-202ENST00000435070 FAM236AA0A1B0GUQ0 79 aa5.7□□□□□ -1.5
CPSF6-202ENST00000435070 FAM236BA0A1B0GV22 79 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms