RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 LINC00052Q96N35 136 aa2.87□□□□□ -1.95
HMGB3P10-201ENST00000434734 LIMD2Q9BT23 127 aa2.87□□□□□ -1.95
HMGB3P10-201ENST00000434734 SMAD5-AS1Q9Y6J3 95 aa2.87□□□□□ -1.95
HMGB3P10-201ENST00000434734 TANC1Q9C0D5 1861 aa2.87□□□□□ -1.95
HMGB3P10-201ENST00000434734 DISP1Q96F81 1524 aa2.87□□□□□ -1.95
HMGB3P10-201ENST00000434734 SHROOM2Q13796 1616 aa2.86□□□□□ -1.95
HMGB3P10-201ENST00000434734 DAPK1P53355 1430 aa2.86□□□□□ -1.95
HMGB3P10-201ENST00000434734 TNS1Q9HBL0 1735 aaKnown RBP2.86□□□□□ -1.95
HMGB3P10-201ENST00000434734 IGKV2-28A0A075B6P5 120 aa2.86□□□□□ -1.95
HMGB3P10-201ENST00000434734 PIGBOS1A0A0B4J2F0 54 aa2.86□□□□□ -1.95
HMGB3P10-201ENST00000434734 TRBV10-3A0A0K0K1G6 114 aa2.86□□□□□ -1.95
HMGB3P10-201ENST00000434734 CYB5AP00167 134 aa2.86□□□□□ -1.95
HMGB3P10-201ENST00000434734 IGKV2D-28P01615 120 aa2.86□□□□□ -1.95
HMGB3P10-201ENST00000434734 SEC11AP67812 179 aa2.86□□□□□ -1.95
HMGB3P10-201ENST00000434734 C15orf53Q8NAA6 179 aa2.86□□□□□ -1.95
HMGB3P10-201ENST00000434734 OR10AG1Q8NH19 301 aa2.86□□□□□ -1.95
HMGB3P10-201ENST00000434734 CYSTM1Q9H1C7 97 aa2.86□□□□□ -1.95
HMGB3P10-201ENST00000434734 ABCC3O15438 1527 aa2.86□□□□□ -1.95
HMGB3P10-201ENST00000434734 LAMC3Q9Y6N6 1575 aa2.86□□□□□ -1.95
HMGB3P10-201ENST00000434734 ADAMTS7Q9UKP4 1686 aa2.85□□□□□ -1.95
HMGB3P10-201ENST00000434734 PXDNLA1KZ92 1463 aa2.85□□□□□ -1.95
HMGB3P10-201ENST00000434734 NOTCH3Q9UM47 2321 aa2.85□□□□□ -1.95
HMGB3P10-201ENST00000434734 CCL16O15467 120 aa2.85□□□□□ -1.95
HMGB3P10-201ENST00000434734 IGLV6-57P01721 117 aa2.85□□□□□ -1.95
HMGB3P10-201ENST00000434734 SH2D6Q7Z4S9 175 aa2.85□□□□□ -1.95
HMGB3P10-201ENST00000434734 MED9Q9NWA0 146 aa2.85□□□□□ -1.95
HMGB3P10-201ENST00000434734 KIAA0100Q14667 2235 aaKnown RBP2.85□□□□□ -1.95
HMGB3P10-201ENST00000434734 CR1P17927 2039 aa2.85□□□□□ -1.95
HMGB3P10-201ENST00000434734 RGPD3A6NKT7 1758 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P10-201ENST00000434734 CDK12Q9NYV4 1490 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P10-201ENST00000434734 TRAV12-3A0A0B4J271 114 aa2.84□□□□□ -1.95
HMGB3P10-201ENST00000434734 TRBV7-7A0A0K0K1E9 115 aa2.84□□□□□ -1.95
HMGB3P10-201ENST00000434734 SFT2D2O95562 160 aa2.84□□□□□ -1.95
HMGB3P10-201ENST00000434734 GYPAP02724 150 aa2.84□□□□□ -1.95
HMGB3P10-201ENST00000434734 TRAPPC2P0DI81 140 aa2.84□□□□□ -1.95
HMGB3P10-201ENST00000434734 TRAPPC2BP0DI82 140 aa2.84□□□□□ -1.95
HMGB3P10-201ENST00000434734 C6orf52Q5T4I8 152 aa2.84□□□□□ -1.95
HMGB3P10-201ENST00000434734 PATE1Q8WXA2 126 aa2.84□□□□□ -1.95
HMGB3P10-201ENST00000434734 S100A16Q96FQ6 103 aaKnown RBP2.84□□□□□ -1.95
HMGB3P10-201ENST00000434734 ODF3Q96PU9 254 aa2.84□□□□□ -1.95
HMGB3P10-201ENST00000434734 C22orf24Q9Y442 160 aa2.84□□□□□ -1.95
HMGB3P10-201ENST00000434734 TET3O43151 1660 aa2.84□□□□□ -1.95
HMGB3P10-201ENST00000434734 LRRIQ1Q96JM4 1722 aa2.84□□□□□ -1.96
HMGB3P10-201ENST00000434734 PPLO60437 1756 aa2.84□□□□□ -1.96
HMGB3P10-201ENST00000434734 PSME4Q14997 1843 aa2.84□□□□□ -1.96
HMGB3P10-201ENST00000434734 RRBP1Q9P2E9 1410 aaKnown RBP2.84□□□□□ -1.96
HMGB3P10-201ENST00000434734 ERVK-7P63135 1459 aa2.84□□□□□ -1.96
HMGB3P10-201ENST00000434734 PRDM15P57071 1507 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P10-201ENST00000434734 DOCK10Q96BY6 2186 aa2.83□□□□□ -1.96
HMGB3P10-201ENST00000434734 IGLC7A0M8Q6 106 aa2.83□□□□□ -1.96
HMGB3P10-201ENST00000434734 ATOX1O00244 68 aa2.83□□□□□ -1.96
HMGB3P10-201ENST00000434734 CCL8P80075 99 aa2.83□□□□□ -1.96
HMGB3P10-201ENST00000434734 MYOZ3Q8TDC0 251 aa2.83□□□□□ -1.96
HMGB3P10-201ENST00000434734 CYTL1Q9NRR1 136 aa2.83□□□□□ -1.96
HMGB3P10-201ENST00000434734 CDC42SE1Q9NRR8 79 aa2.83□□□□□ -1.96
HMGB3P10-201ENST00000434734 MRPL36Q9P0J6 103 aaKnown RBP2.83□□□□□ -1.96
HMGB3P10-201ENST00000434734 ORMDL1Q9P0S3 153 aa2.83□□□□□ -1.96
HMGB3P10-201ENST00000434734 SIP14410 1827 aa2.83□□□□□ -1.96
HMGB3P10-201ENST00000434734 SHROOM3Q8TF72 1996 aa2.83□□□□□ -1.96
HMGB3P10-201ENST00000434734 CEP162Q5TB80 1403 aa2.83□□□□□ -1.96
HMGB3P10-201ENST00000434734 UACAQ9BZF9 1416 aa2.83□□□□□ -1.96
HMGB3P10-201ENST00000434734 BRWD1Q9NSI6 2320 aa2.82□□□□□ -1.96
HMGB3P10-201ENST00000434734 DOCK11Q5JSL3 2073 aa2.82□□□□□ -1.96
HMGB3P10-201ENST00000434734 A8MU10 97 aa2.82□□□□□ -1.96
HMGB3P10-201ENST00000434734 SPTBP11277 2137 aa2.82□□□□□ -1.96
HMGB3P10-201ENST00000434734 PRR9Q5T870 116 aa2.82□□□□□ -1.96
HMGB3P10-201ENST00000434734 RTTNQ86VV8 2226 aa2.82□□□□□ -1.96
HMGB3P10-201ENST00000434734 COL2A1P02458 1487 aaPredicted RBP2.82□□□□□ -1.96
HMGB3P10-201ENST00000434734 ERICH3Q5RHP9 1530 aa2.82□□□□□ -1.96
HMGB3P10-201ENST00000434734 COL4A2P08572 1712 aa2.82□□□□□ -1.96
HMGB3P10-201ENST00000434734 NWD2Q9ULI1 1742 aa2.82□□□□□ -1.96
HMGB3P10-201ENST00000434734 DOCK2Q92608 1830 aa2.82□□□□□ -1.96
HMGB3P10-201ENST00000434734 IGKV3-7A0A075B6H7 116 aa2.81□□□□□ -1.96
HMGB3P10-201ENST00000434734 TEX49A0A1B0GTD5 131 aa2.81□□□□□ -1.96
HMGB3P10-201ENST00000434734 NUPR2A6NF83 97 aa2.81□□□□□ -1.96
HMGB3P10-201ENST00000434734 NAP1L6A6NFF2 107 aa2.81□□□□□ -1.96
HMGB3P10-201ENST00000434734 SIX6O95475 246 aa2.81□□□□□ -1.96
HMGB3P10-201ENST00000434734 KRTDAPP60985 99 aa2.81□□□□□ -1.96
HMGB3P10-201ENST00000434734 S100A13Q99584 98 aa2.81□□□□□ -1.96
HMGB3P10-201ENST00000434734 CYP4F30PQ9H0H9 118 aa2.81□□□□□ -1.96
HMGB3P10-201ENST00000434734 MAGI2Q86UL8 1455 aa2.81□□□□□ -1.96
HMGB3P10-201ENST00000434734 SHANK2Q9UPX8 1470 aa2.81□□□□□ -1.96
HMGB3P10-201ENST00000434734 ARFGEF3Q5TH69 2177 aa2.81□□□□□ -1.96
HMGB3P10-201ENST00000434734 FN1P02751 2386 aaKnown RBP2.81□□□□□ -1.96
HMGB3P10-201ENST00000434734 COL16A1Q07092 1604 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P10-201ENST00000434734 TRBV10-1A0A0K0K1A3 114 aa2.8□□□□□ -1.96
HMGB3P10-201ENST00000434734 CRYM-AS1A6NIL9 109 aa2.8□□□□□ -1.96
HMGB3P10-201ENST00000434734 H3BRM9 83 aa2.8□□□□□ -1.96
HMGB3P10-201ENST00000434734 SERP2Q8N6R1 65 aa2.8□□□□□ -1.96
HMGB3P10-201ENST00000434734 AMELYQ99218 206 aa2.8□□□□□ -1.96
HMGB3P10-201ENST00000434734 ALPK2Q86TB3 2170 aa2.8□□□□□ -1.96
HMGB3P10-201ENST00000434734 EXPH5Q8NEV8 1989 aa2.8□□□□□ -1.96
HMGB3P10-201ENST00000434734 DLG5Q8TDM6 1919 aa2.8□□□□□ -1.96
HMGB3P10-201ENST00000434734 MYH4Q9Y623 1939 aa2.8□□□□□ -1.96
HMGB3P10-201ENST00000434734 COL1A2P08123 1366 aa2.79□□□□□ -1.96
HMGB3P10-201ENST00000434734 APOC3P02656 99 aa2.79□□□□□ -1.96
HMGB3P10-201ENST00000434734 KRTAP10-12P60413 245 aa2.79□□□□□ -1.96
HMGB3P10-201ENST00000434734 C4orf3Q8WVX3 66 aa2.79□□□□□ -1.96
HMGB3P10-201ENST00000434734 REG4Q9BYZ8 158 aa2.79□□□□□ -1.96
HMGB3P10-201ENST00000434734 UQCR10Q9UDW1 63 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms