RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 BUB1B-PAK6H3BSN5 160 aa6.16□□□□□ -1.42
VTI1A-202ENST00000432306 PRRG2O14669 202 aa6.16□□□□□ -1.42
VTI1A-202ENST00000432306 PRSS1P07477 247 aa6.16□□□□□ -1.42
VTI1A-202ENST00000432306 CNTFRP26992 372 aa6.16□□□□□ -1.42
VTI1A-202ENST00000432306 TCTAP57738 103 aa6.16□□□□□ -1.42
VTI1A-202ENST00000432306 CKS1BP61024 79 aa6.16□□□□□ -1.42
VTI1A-202ENST00000432306 MORN3Q6PF18 240 aaPredicted RBP6.16□□□□□ -1.42
VTI1A-202ENST00000432306 NPBQ8NG41 125 aa6.16□□□□□ -1.42
VTI1A-202ENST00000432306 FAM215AQ9Y5M1 114 aa6.16□□□□□ -1.42
VTI1A-202ENST00000432306 RAI1Q7Z5J4 1906 aaPredicted RBP6.15□□□□□ -1.42
VTI1A-202ENST00000432306 COL6A5A8TX70 2615 aa6.15□□□□□ -1.42
VTI1A-202ENST00000432306 IGLV11-55A0A075B6I3 123 aa6.15□□□□□ -1.42
VTI1A-202ENST00000432306 IGHV3-21A0A0B4J1V1 117 aa6.15□□□□□ -1.42
VTI1A-202ENST00000432306 F8VRH5 84 aa6.15□□□□□ -1.42
VTI1A-202ENST00000432306 SMKR1H3BMG3 65 aa6.15□□□□□ -1.42
VTI1A-202ENST00000432306 ZNF80P51504 273 aaPredicted RBP6.15□□□□□ -1.42
VTI1A-202ENST00000432306 UBE2D1P51668 147 aa6.15□□□□□ -1.42
VTI1A-202ENST00000432306 FXYD7P58549 80 aa6.15□□□□□ -1.42
VTI1A-202ENST00000432306 LAGE3Q14657 143 aa6.15□□□□□ -1.42
VTI1A-202ENST00000432306 GTSCR1Q86UQ5 136 aa6.15□□□□□ -1.42
VTI1A-202ENST00000432306 MAPKAPK5-AS1Q8N8E1 139 aa6.15□□□□□ -1.42
VTI1A-202ENST00000432306 LINC00482Q8N8I6 264 aa6.15□□□□□ -1.42
VTI1A-202ENST00000432306 NRACQ8N912 160 aa6.15□□□□□ -1.42
VTI1A-202ENST00000432306 OR11H6Q8NGC7 330 aa6.15□□□□□ -1.42
VTI1A-202ENST00000432306 MYOZ3Q8TDC0 251 aa6.15□□□□□ -1.42
VTI1A-202ENST00000432306 TTTY13Q9BZ97 58 aa6.15□□□□□ -1.42
VTI1A-202ENST00000432306 MRPL35Q9NZE8 188 aaKnown RBP6.15□□□□□ -1.42
VTI1A-202ENST00000432306 PRO0628Q9UI54 55 aa6.15□□□□□ -1.42
VTI1A-202ENST00000432306 CYSLTR1Q9Y271 337 aa6.15□□□□□ -1.42
VTI1A-202ENST00000432306 TRAV40A0A0B4J280 105 aa6.14□□□□□ -1.43
VTI1A-202ENST00000432306 NCBP2LA6PVI3 153 aaKnown RBP6.14□□□□□ -1.43
VTI1A-202ENST00000432306 UBE2D3P61077 147 aa6.14□□□□□ -1.43
VTI1A-202ENST00000432306 UBE2D2P62837 147 aa6.14□□□□□ -1.43
VTI1A-202ENST00000432306 CCL8P80075 99 aa6.14□□□□□ -1.43
VTI1A-202ENST00000432306 LYPD2Q6UXB3 125 aa6.14□□□□□ -1.43
VTI1A-202ENST00000432306 SH2D6Q7Z4S9 175 aa6.14□□□□□ -1.43
VTI1A-202ENST00000432306 LINC01600Q96MT4 127 aa6.14□□□□□ -1.43
VTI1A-202ENST00000432306 FBXL15Q9H469 300 aa6.14□□□□□ -1.43
VTI1A-202ENST00000432306 SELENOKQ9Y6D0 94 aa6.14□□□□□ -1.43
VTI1A-202ENST00000432306 MYMXA0A1B0GTQ4 84 aa6.13□□□□□ -1.43
VTI1A-202ENST00000432306 H7C1H1 209 aa6.13□□□□□ -1.43
VTI1A-202ENST00000432306 LYRM7Q5U5X0 104 aa6.13□□□□□ -1.43
VTI1A-202ENST00000432306 HIVEP2P31629 2446 aa6.13□□□□□ -1.43
VTI1A-202ENST00000432306 TLN2Q9Y4G6 2542 aa6.13□□□□□ -1.43
VTI1A-202ENST00000432306 IGKV2-40A0A087WW87 121 aaPredicted RBP6.13□□□□□ -1.43
VTI1A-202ENST00000432306 TMSB15BA0A087X1C1 80 aa6.13□□□□□ -1.43
VTI1A-202ENST00000432306 IGHV3-72A0A0B4J1Y9 119 aa6.13□□□□□ -1.43
VTI1A-202ENST00000432306 LINC01549A6NIU2 74 aa6.13□□□□□ -1.43
VTI1A-202ENST00000432306 GAS8-AS1O95177 125 aa6.13□□□□□ -1.43
VTI1A-202ENST00000432306 APOMO95445 188 aa6.13□□□□□ -1.43
VTI1A-202ENST00000432306 IGKV2D-40P01614 121 aaPredicted RBP6.13□□□□□ -1.43
VTI1A-202ENST00000432306 HIST1H4GQ99525 98 aa6.13□□□□□ -1.43
VTI1A-202ENST00000432306 MSRB1Q9NZV6 116 aa6.13□□□□□ -1.43
VTI1A-202ENST00000432306 Q9UF83 564 aa6.13□□□□□ -1.43
VTI1A-202ENST00000432306 STAB1Q9NY15 2570 aa6.13□□□□□ -1.43
VTI1A-202ENST00000432306 TRBV20-1A0A075B6N2 111 aa6.12□□□□□ -1.43
VTI1A-202ENST00000432306 IGHV7-4-1A0A0J9YVY3 117 aa6.12□□□□□ -1.43
VTI1A-202ENST00000432306 C4orf26Q17RF5 130 aa6.12□□□□□ -1.43
VTI1A-202ENST00000432306 ORMDL2Q53FV1 153 aa6.12□□□□□ -1.43
VTI1A-202ENST00000432306 PRIMA1Q86XR5 153 aa6.12□□□□□ -1.43
VTI1A-202ENST00000432306 NEXN-AS1Q8NBZ9 246 aa6.12□□□□□ -1.43
VTI1A-202ENST00000432306 FAM57AQ8TBR7 257 aa6.12□□□□□ -1.43
VTI1A-202ENST00000432306 TOMM6Q96B49 74 aa6.12□□□□□ -1.43
VTI1A-202ENST00000432306 SMAD5-AS1Q9Y6J3 95 aa6.12□□□□□ -1.43
VTI1A-202ENST00000432306 ATRQ13535 2644 aa6.11□□□□□ -1.43
VTI1A-202ENST00000432306 IGKV3D-20A0A0C4DH25 116 aa6.11□□□□□ -1.43
VTI1A-202ENST00000432306 LGALS1P09382 135 aaKnown RBP6.11□□□□□ -1.43
VTI1A-202ENST00000432306 CD7P09564 240 aa6.11□□□□□ -1.43
VTI1A-202ENST00000432306 INSL3P51460 131 aa6.11□□□□□ -1.43
VTI1A-202ENST00000432306 AMTNQ6UX39 209 aa6.11□□□□□ -1.43
VTI1A-202ENST00000432306 Q6ZUT4 128 aa6.11□□□□□ -1.43
VTI1A-202ENST00000432306 TEN1Q86WV5 123 aa6.11□□□□□ -1.43
VTI1A-202ENST00000432306 PPDPFLQ8WWR9 84 aa6.11□□□□□ -1.43
VTI1A-202ENST00000432306 RNASE6Q93091 150 aaKnown RBP6.11□□□□□ -1.43
VTI1A-202ENST00000432306 Q96MF0 132 aa6.11□□□□□ -1.43
VTI1A-202ENST00000432306 C20orf78Q9BR46 151 aa6.11□□□□□ -1.43
VTI1A-202ENST00000432306 SLC50A1Q9BRV3 221 aa6.11□□□□□ -1.43
VTI1A-202ENST00000432306 M0R381 172 aa6.11□□□□□ -1.43
VTI1A-202ENST00000432306 ATP5G2Q06055 141 aa6.11□□□□□ -1.43
VTI1A-202ENST00000432306 SYT8Q8NBV8 401 aa6.11□□□□□ -1.43
VTI1A-202ENST00000432306 LY6G5BQ8NDX9 201 aa6.11□□□□□ -1.43
VTI1A-202ENST00000432306 OR13C6PQ8NH95 151 aa6.11□□□□□ -1.43
VTI1A-202ENST00000432306 SMR3AQ99954 134 aa6.11□□□□□ -1.43
VTI1A-202ENST00000432306 SMIM2Q9BVW6 85 aa6.11□□□□□ -1.43
VTI1A-202ENST00000432306 C21orf62Q9NYP8 219 aa6.11□□□□□ -1.43
VTI1A-202ENST00000432306 ERG28Q9UKR5 140 aa6.11□□□□□ -1.43
VTI1A-202ENST00000432306 LENEPQ9Y5L5 61 aa6.11□□□□□ -1.43
VTI1A-202ENST00000432306 TMEM262E9PQX1 116 aa6.1□□□□□ -1.43
VTI1A-202ENST00000432306 RHODO00212 210 aa6.1□□□□□ -1.43
VTI1A-202ENST00000432306 APELAP0DMC3 54 aa6.1□□□□□ -1.43
VTI1A-202ENST00000432306 ERCC8Q13216 396 aa6.1□□□□□ -1.43
VTI1A-202ENST00000432306 DEFB113Q30KQ7 82 aa6.1□□□□□ -1.43
VTI1A-202ENST00000432306 NFE4Q86UQ8 179 aa6.1□□□□□ -1.43
VTI1A-202ENST00000432306 POM121L12Q8N7R1 296 aa6.1□□□□□ -1.43
VTI1A-202ENST00000432306 WFDC11Q8NEX6 87 aa6.1□□□□□ -1.43
VTI1A-202ENST00000432306 CCL17Q92583 94 aa6.1□□□□□ -1.43
VTI1A-202ENST00000432306 NBEAL1Q6ZS30 2694 aa6.09□□□□□ -1.43
VTI1A-202ENST00000432306 IGHV1-69DA0A0B4J2H0 117 aa6.09□□□□□ -1.43
VTI1A-202ENST00000432306 LYRM9A8MSI8 78 aa6.09□□□□□ -1.43
VTI1A-202ENST00000432306 CTSGP08311 255 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms