RNA–Protein interactions for RNA: ENST00000431918.1

CLDN4-202, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,108 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-202ENST00000431918 PRR9Q5T870 116 aa8.66□□□□□ -1.02
CLDN4-202ENST00000431918 MRPL53Q96EL3 112 aaKnown RBP8.66□□□□□ -1.02
CLDN4-202ENST00000431918 SPAG8Q99932 426 aaPredicted RBP8.66□□□□□ -1.02
CLDN4-202ENST00000431918 KNCNA6PVL3 124 aa8.66□□□□□ -1.02
CLDN4-202ENST00000431918 SIVA1O15304 175 aa8.66□□□□□ -1.02
CLDN4-202ENST00000431918 SLURP1P55000 103 aa8.66□□□□□ -1.02
CLDN4-202ENST00000431918 ZFAND6Q6FIF0 208 aa8.66□□□□□ -1.02
CLDN4-202ENST00000431918 ZNF843Q8N446 348 aa8.66□□□□□ -1.02
CLDN4-202ENST00000431918 OR11H1Q8NG94 326 aa8.66□□□□□ -1.02
CLDN4-202ENST00000431918 IGHV4OR15-8A0A075B7B6 117 aa8.66□□□□□ -1.02
CLDN4-202ENST00000431918 A0A087WW49 117 aa8.66□□□□□ -1.02
CLDN4-202ENST00000431918 OR11H12B2RN74 326 aa8.66□□□□□ -1.02
CLDN4-202ENST00000431918 IGKCP01834 107 aa8.66□□□□□ -1.02
CLDN4-202ENST00000431918 ZNF493Q6ZR52 646 aa8.66□□□□□ -1.02
CLDN4-202ENST00000431918 OR11H2Q8NH07 326 aa8.66□□□□□ -1.02
CLDN4-202ENST00000431918 RPL39LQ96EH5 51 aaKnown RBP8.66□□□□□ -1.02
CLDN4-202ENST00000431918 DPM2O94777 84 aa8.65□□□□□ -1.02
CLDN4-202ENST00000431918 AMTNQ6UX39 209 aa8.65□□□□□ -1.02
CLDN4-202ENST00000431918 J3QLI3 93 aa8.65□□□□□ -1.02
CLDN4-202ENST00000431918 K7ERJ3 54 aa8.65□□□□□ -1.02
CLDN4-202ENST00000431918 SUMO2P61956 95 aaKnown RBP8.65□□□□□ -1.02
CLDN4-202ENST00000431918 Q8N8P6 123 aa8.65□□□□□ -1.02
CLDN4-202ENST00000431918 F8W1H4 67 aa8.65□□□□□ -1.03
CLDN4-202ENST00000431918 OR9G4Q8NGQ1 327 aa8.65□□□□□ -1.03
CLDN4-202ENST00000431918 LINC01587Q99440 93 aa8.64□□□□□ -1.03
CLDN4-202ENST00000431918 TTTY13Q9BZ97 58 aa8.64□□□□□ -1.03
CLDN4-202ENST00000431918 LINC01545Q5VT33 79 aa8.64□□□□□ -1.03
CLDN4-202ENST00000431918 C20orf78Q9BR46 151 aa8.64□□□□□ -1.03
CLDN4-202ENST00000431918 JPT2Q9H910 190 aa8.64□□□□□ -1.03
CLDN4-202ENST00000431918 RAX2Q96IS3 184 aa8.64□□□□□ -1.03
CLDN4-202ENST00000431918 ORMDL2Q53FV1 153 aa8.63□□□□□ -1.03
CLDN4-202ENST00000431918 CRYBG3Q68DQ2 2970 aa8.63□□□□□ -1.03
CLDN4-202ENST00000431918 DUSP14O95147 198 aaKnown RBP8.63□□□□□ -1.03
CLDN4-202ENST00000431918 SRSF9Q13242 221 aaKnown RBP eCLIP8.63□□□□□ -1.03
CLDN4-202ENST00000431918 ZNF876PQ49A33 203 aa8.63□□□□□ -1.03
CLDN4-202ENST00000431918 TMEM170BQ5T4T1 132 aa8.63□□□□□ -1.03
CLDN4-202ENST00000431918 PCP2Q8IVA1 136 aa8.63□□□□□ -1.03
CLDN4-202ENST00000431918 MRPL35Q9NZE8 188 aaKnown RBP8.63□□□□□ -1.03
CLDN4-202ENST00000431918 PEMTQ9UBM1 199 aa8.63□□□□□ -1.03
CLDN4-202ENST00000431918 HIST1H4GQ99525 98 aa8.63□□□□□ -1.03
CLDN4-202ENST00000431918 SMIM2Q9BVW6 85 aa8.63□□□□□ -1.03
CLDN4-202ENST00000431918 LGALS9BQ3B8N2 356 aa8.62□□□□□ -1.03
CLDN4-202ENST00000431918 LGALS9CQ6DKI2 356 aa8.62□□□□□ -1.03
CLDN4-202ENST00000431918 LOC107984156A0A0G2JMH3 177 aa8.62□□□□□ -1.03
CLDN4-202ENST00000431918 ELANEP08246 267 aa8.62□□□□□ -1.03
CLDN4-202ENST00000431918 LGALS1P09382 135 aaKnown RBP8.62□□□□□ -1.03
CLDN4-202ENST00000431918 SFTA2Q6UW10 78 aa8.62□□□□□ -1.03
CLDN4-202ENST00000431918 ARL17AQ8IVW1 177 aa8.62□□□□□ -1.03
CLDN4-202ENST00000431918 ZFAND2AQ8N6M9 145 aa8.62□□□□□ -1.03
CLDN4-202ENST00000431918 RNF185Q96GF1 192 aa8.62□□□□□ -1.03
CLDN4-202ENST00000431918 LENEPQ9Y5L5 61 aa8.62□□□□□ -1.03
CLDN4-202ENST00000431918 IGHV4-31P0DP07 118 aa8.62□□□□□ -1.03
CLDN4-202ENST00000431918 C1QTNF4Q9BXJ3 329 aa8.62□□□□□ -1.03
CLDN4-202ENST00000431918 ITPR1Q14643 2758 aa8.62□□□□□ -1.03
CLDN4-202ENST00000431918 MT-ATP8P03928 68 aa8.61□□□□□ -1.03
CLDN4-202ENST00000431918 ODF1Q14990 250 aa8.61□□□□□ -1.03
CLDN4-202ENST00000431918 SPATA25Q9BR10 227 aa8.61□□□□□ -1.03
CLDN4-202ENST00000431918 SPANXB1Q9NS25 103 aaPredicted RBP8.61□□□□□ -1.03
CLDN4-202ENST00000431918 C2orf66Q6UXQ4 117 aa8.61□□□□□ -1.03
CLDN4-202ENST00000431918 UBE2E2Q96LR5 201 aa8.61□□□□□ -1.03
CLDN4-202ENST00000431918 U3KQE9 123 aa8.61□□□□□ -1.03
CLDN4-202ENST00000431918 TRBV20-1A0A075B6N2 111 aa8.61□□□□□ -1.03
CLDN4-202ENST00000431918 PPP1R17O96001 155 aa8.61□□□□□ -1.03
CLDN4-202ENST00000431918 RPL32P62910 135 aaKnown RBP8.61□□□□□ -1.03
CLDN4-202ENST00000431918 C2orf91Q6ZV80 131 aa8.61□□□□□ -1.03
CLDN4-202ENST00000431918 GPHB5Q86YW7 130 aa8.61□□□□□ -1.03
CLDN4-202ENST00000431918 CSMD1Q96PZ7 3565 aa8.61□□□□□ -1.03
CLDN4-202ENST00000431918 DGAT2L7PQ6IED9 249 aa8.61□□□□□ -1.03
CLDN4-202ENST00000431918 WFDC11Q8NEX6 87 aa8.61□□□□□ -1.03
CLDN4-202ENST00000431918 ERG28Q9UKR5 140 aa8.61□□□□□ -1.03
CLDN4-202ENST00000431918 HECTD1Q9ULT8 2610 aa8.6□□□□□ -1.03
CLDN4-202ENST00000431918 GAGE12JA6NER3 117 aa8.6□□□□□ -1.03
CLDN4-202ENST00000431918 GAGE7O76087 117 aa8.6□□□□□ -1.03
CLDN4-202ENST00000431918 GAGE12FP0CL80 117 aa8.6□□□□□ -1.03
CLDN4-202ENST00000431918 GAGE12GP0CL81 117 aa8.6□□□□□ -1.03
CLDN4-202ENST00000431918 GAGE12IP0CL82 117 aa8.6□□□□□ -1.03
CLDN4-202ENST00000431918 GAGE4Q13068 117 aa8.6□□□□□ -1.03
CLDN4-202ENST00000431918 FLNAP21333 2647 aaKnown RBP8.6□□□□□ -1.03
CLDN4-202ENST00000431918 GAGE2BQ13066 116 aa8.6□□□□□ -1.03
CLDN4-202ENST00000431918 GAGE2EQ4V326 116 aa8.6□□□□□ -1.03
CLDN4-202ENST00000431918 C18orf65Q6ZTR6 163 aa8.6□□□□□ -1.03
CLDN4-202ENST00000431918 GAGE2DQ9UEU5 116 aa8.6□□□□□ -1.03
CLDN4-202ENST00000431918 LINC01619G3V211 115 aa8.6□□□□□ -1.03
CLDN4-202ENST00000431918 SNCGO76070 127 aa8.6□□□□□ -1.03
CLDN4-202ENST00000431918 INSL3P51460 131 aa8.6□□□□□ -1.03
CLDN4-202ENST00000431918 HERVK_113P61574 105 aa8.6□□□□□ -1.03
CLDN4-202ENST00000431918 PGPEP1Q9NXJ5 209 aa8.6□□□□□ -1.03
CLDN4-202ENST00000431918 IGHV1OR15-1A0A075B7D0 117 aa8.59□□□□□ -1.03
CLDN4-202ENST00000431918 K7EMI3 77 aa8.59□□□□□ -1.03
CLDN4-202ENST00000431918 APRG1Q8IVJ8 170 aa8.59□□□□□ -1.03
CLDN4-202ENST00000431918 XCL2Q9UBD3 114 aa8.59□□□□□ -1.03
CLDN4-202ENST00000431918 UTP20O75691 2785 aaKnown RBP8.59□□□□□ -1.03
CLDN4-202ENST00000431918 PRSS29PA6NIE9 313 aa8.59□□□□□ -1.03
CLDN4-202ENST00000431918 IGLV1-40P01703 118 aa8.59□□□□□ -1.03
CLDN4-202ENST00000431918 PSMB8P28062 276 aa8.59□□□□□ -1.03
CLDN4-202ENST00000431918 NSUN5P1Q3KNT7 163 aa8.59□□□□□ -1.03
CLDN4-202ENST00000431918 MDFICQ9P1T7 246 aa8.59□□□□□ -1.03
CLDN4-202ENST00000431918 IGHV3-64A0A075B6Q5 118 aa8.59□□□□□ -1.03
CLDN4-202ENST00000431918 SDHAF1A6NFY7 115 aa8.58□□□□□ -1.04
CLDN4-202ENST00000431918 K7EMT4 169 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms