RNA–Protein interactions for RNA: ENST00000430407.1

RCC1-209, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 5

Gene RCC1, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-209ENST00000430407 SFRP2Q96HF1 295 aa11.98□□□□□ -0.49
RCC1-209ENST00000430407 GTSF1LQ9H1H1 148 aa11.98□□□□□ -0.49
RCC1-209ENST00000430407 PGPEP1Q9NXJ5 209 aa11.98□□□□□ -0.49
RCC1-209ENST00000430407 TAGLN2P37802 199 aaKnown RBP11.97□□□□□ -0.49
RCC1-209ENST00000430407 ERVFC1-1P60608 527 aa11.97□□□□□ -0.49
RCC1-209ENST00000430407 RPL19P84098 196 aaKnown RBP11.97□□□□□ -0.49
RCC1-209ENST00000430407 MEF2BQ02080 365 aaPredicted RBP11.97□□□□□ -0.49
RCC1-209ENST00000430407 C10orf126Q8N4M7 172 aa11.97□□□□□ -0.49
RCC1-209ENST00000430407 IGHV3-38A0A0C4DH36 116 aa11.96□□□□□ -0.49
RCC1-209ENST00000430407 GAGE12JA6NER3 117 aa11.96□□□□□ -0.49
RCC1-209ENST00000430407 EPM2AB3EWF7 344 aa11.96□□□□□ -0.49
RCC1-209ENST00000430407 BCL2P10415 239 aa11.96□□□□□ -0.49
RCC1-209ENST00000430407 GAGE1Q13065 139 aa11.96□□□□□ -0.49
RCC1-209ENST00000430407 GAGE4Q13068 117 aa11.96□□□□□ -0.49
RCC1-209ENST00000430407 GAGE5Q13069 117 aa11.96□□□□□ -0.49
RCC1-209ENST00000430407 GAGE13Q4V321 117 aa11.96□□□□□ -0.49
RCC1-209ENST00000430407 OR10J3Q5JRS4 329 aa11.96□□□□□ -0.49
RCC1-209ENST00000430407 LELP1Q5T871 98 aa11.96□□□□□ -0.49
RCC1-209ENST00000430407 FAM74A4Q5TZK3 123 aa11.96□□□□□ -0.49
RCC1-209ENST00000430407 Q6ZRN7 208 aaPredicted RBP11.96□□□□□ -0.49
RCC1-209ENST00000430407 SMIM12Q96EX1 92 aa11.96□□□□□ -0.49
RCC1-209ENST00000430407 DERL1Q9BUN8 251 aa11.96□□□□□ -0.49
RCC1-209ENST00000430407 CRYGDP07320 174 aa11.95□□□□□ -0.5
RCC1-209ENST00000430407 CENPWQ5EE01 88 aa11.95□□□□□ -0.5
RCC1-209ENST00000430407 VAX2Q9UIW0 290 aa11.95□□□□□ -0.5
RCC1-209ENST00000430407 A0A087WWL8 130 aa11.94□□□□□ -0.5
RCC1-209ENST00000430407 SNAI2O43623 268 aa11.94□□□□□ -0.5
RCC1-209ENST00000430407 LINC00694P0DN24 101 aa11.94□□□□□ -0.5
RCC1-209ENST00000430407 LINC01556Q5JQF7 62 aa11.94□□□□□ -0.5
RCC1-209ENST00000430407 CDPF1Q6NVV7 123 aa11.94□□□□□ -0.5
RCC1-209ENST00000430407 C14orf178Q8N769 122 aaPredicted RBP11.94□□□□□ -0.5
RCC1-209ENST00000430407 DAZAP1Q96EP5 407 aaKnown RBP11.94□□□□□ -0.5
RCC1-209ENST00000430407 SSBP4Q9BWG4 385 aaPredicted RBP11.94□□□□□ -0.5
RCC1-209ENST00000430407 MED9Q9NWA0 146 aa11.94□□□□□ -0.5
RCC1-209ENST00000430407 MSRB1Q9NZV6 116 aa11.94□□□□□ -0.5
RCC1-209ENST00000430407 TNFRSF18Q9Y5U5 241 aa11.94□□□□□ -0.5
RCC1-209ENST00000430407 OR5AL1P0C617 328 aa11.93□□□□□ -0.5
RCC1-209ENST00000430407 GNG4P50150 75 aa11.93□□□□□ -0.5
RCC1-209ENST00000430407 HSPG2P98160 4391 aa11.93□□□□□ -0.5
RCC1-209ENST00000430407 RAB19A4D1S5 217 aa11.92□□□□□ -0.5
RCC1-209ENST00000430407 IGLV2-8P01709 118 aa11.92□□□□□ -0.5
RCC1-209ENST00000430407 BLOC1S1P78537 153 aa11.92□□□□□ -0.5
RCC1-209ENST00000430407 OR10AG1Q8NH19 301 aa11.92□□□□□ -0.5
RCC1-209ENST00000430407 BIN3Q9NQY0 253 aa11.92□□□□□ -0.5
RCC1-209ENST00000430407 TRBV10-1A0A0K0K1A3 114 aa11.91□□□□□ -0.5
RCC1-209ENST00000430407 RPS20P60866 119 aaKnown RBP11.91□□□□□ -0.5
RCC1-209ENST00000430407 SPANXN1Q5VSR9 72 aa11.91□□□□□ -0.5
RCC1-209ENST00000430407 ALKAL2Q6UX46 152 aa11.91□□□□□ -0.5
RCC1-209ENST00000430407 Q9UF83 564 aa11.91□□□□□ -0.5
RCC1-209ENST00000430407 A0A087WWC5 75 aa11.9□□□□□ -0.5
RCC1-209ENST00000430407 XKRY2A2RUG3 117 aa11.89□□□□□ -0.51
RCC1-209ENST00000430407 C19orf71A6NCJ1 209 aa11.89□□□□□ -0.51
RCC1-209ENST00000430407 IBA57-AS1B1ANH7 110 aa11.89□□□□□ -0.51
RCC1-209ENST00000430407 RAB4BP61018 213 aa11.89□□□□□ -0.51
RCC1-209ENST00000430407 RPL36AP83881 106 aaKnown RBP11.89□□□□□ -0.51
RCC1-209ENST00000430407 OR2D3Q8NGH3 330 aa11.89□□□□□ -0.51
RCC1-209ENST00000430407 RPL36ALQ969Q0 106 aaKnown RBP11.89□□□□□ -0.51
RCC1-209ENST00000430407 P01737 135 aa11.88□□□□□ -0.51
RCC1-209ENST00000430407 INAFM2P0DMQ5 153 aa11.88□□□□□ -0.51
RCC1-209ENST00000430407 FRZBQ92765 325 aa11.88□□□□□ -0.51
RCC1-209ENST00000430407 LRP1BQ9NZR2 4599 aa11.87□□□□□ -0.51
RCC1-209ENST00000430407 TRBV20OR9-2A0A075B6H5 130 aa11.87□□□□□ -0.51
RCC1-209ENST00000430407 MUC21A0A0G2JKD1 596 aa11.87□□□□□ -0.51
RCC1-209ENST00000430407 MUC21A0A140T8X8 626 aa11.87□□□□□ -0.51
RCC1-209ENST00000430407 A0A1B0GVG6 124 aa11.87□□□□□ -0.51
RCC1-209ENST00000430407 IGHV3-30P01768 117 aa11.87□□□□□ -0.51
RCC1-209ENST00000430407 IGHV3-33P01772 117 aa11.87□□□□□ -0.51
RCC1-209ENST00000430407 IGHV3-30-3P0DP02 117 aa11.87□□□□□ -0.51
RCC1-209ENST00000430407 IGHV3-30-5P0DP03 117 aa11.87□□□□□ -0.51
RCC1-209ENST00000430407 ZNF56Q15929 161 aa11.87□□□□□ -0.51
RCC1-209ENST00000430407 FER1L6-AS1Q8NA97 138 aa11.87□□□□□ -0.51
RCC1-209ENST00000430407 LYPD6BQ8NI32 183 aa11.87□□□□□ -0.51
RCC1-209ENST00000430407 TRBV7-3A0A075B6L6 115 aa11.86□□□□□ -0.51
RCC1-209ENST00000430407 IGLC6P0CF74 106 aa11.86□□□□□ -0.51
RCC1-209ENST00000430407 SMIM17P0DL12 118 aa11.86□□□□□ -0.51
RCC1-209ENST00000430407 FUSP35637 526 aaKnown RBP eCLIP11.86□□□□□ -0.511e-6■■■□□ 15.1
RCC1-209ENST00000430407 SSTP61278 116 aa11.86□□□□□ -0.51
RCC1-209ENST00000430407 AP1S3Q96PC3 154 aa11.86□□□□□ -0.51
RCC1-209ENST00000430407 A0A087WTM6 91 aa11.85□□□□□ -0.51
RCC1-209ENST00000430407 RBFOX3A6NFN3 312 aa11.85□□□□□ -0.51
RCC1-209ENST00000430407 GZMBP10144 247 aa11.85□□□□□ -0.51
RCC1-209ENST00000430407 NKX2-5P52952 324 aaPredicted RBP11.85□□□□□ -0.51
RCC1-209ENST00000430407 UBE2D3P61077 147 aa11.85□□□□□ -0.51
RCC1-209ENST00000430407 UBE2D2P62837 147 aa11.85□□□□□ -0.51
RCC1-209ENST00000430407 CACNG7P62955 275 aa11.85□□□□□ -0.51
RCC1-209ENST00000430407 OR10G8Q8NGN5 311 aa11.85□□□□□ -0.51
RCC1-209ENST00000430407 TPPP3Q9BW30 176 aa11.85□□□□□ -0.51
RCC1-209ENST00000430407 F2Z2F3 143 aa11.84□□□□□ -0.51
RCC1-209ENST00000430407 F5H697 171 aa11.84□□□□□ -0.51
RCC1-209ENST00000430407 TMEM250H0YL14 139 aa11.84□□□□□ -0.51
RCC1-209ENST00000430407 PSCAO43653 123 aa11.84□□□□□ -0.51
RCC1-209ENST00000430407 LAGE3Q14657 143 aa11.84□□□□□ -0.51
RCC1-209ENST00000430407 XGP55808 180 aa11.83□□□□□ -0.52
RCC1-209ENST00000430407 Q5VSD8 79 aa11.83□□□□□ -0.52
RCC1-209ENST00000430407 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.83□□□□□ -0.52
RCC1-209ENST00000430407 NEXN-AS1Q8NBZ9 246 aa11.83□□□□□ -0.52
RCC1-209ENST00000430407 NUDT10Q8NFP7 164 aa11.83□□□□□ -0.52
RCC1-209ENST00000430407 NUDT11Q96G61 164 aa11.83□□□□□ -0.52
RCC1-209ENST00000430407 KIF25-AS1Q9Y6Z4 181 aa11.83□□□□□ -0.52
RCC1-209ENST00000430407 TOR2AQ5JU69 321 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms