RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 C9JQL5 133 aa11.88□□□□□ -0.51
CTSD-203ENST00000429746 SRP19P09132 144 aaKnown RBP11.88□□□□□ -0.51
CTSD-203ENST00000429746 SRIP30626 198 aa11.88□□□□□ -0.51
CTSD-203ENST00000429746 RHOHQ15669 191 aa11.88□□□□□ -0.51
CTSD-203ENST00000429746 ZFP82Q8N141 532 aa11.88□□□□□ -0.51
CTSD-203ENST00000429746 NUDT10Q8NFP7 164 aa11.88□□□□□ -0.51
CTSD-203ENST00000429746 NUDT11Q96G61 164 aa11.88□□□□□ -0.51
CTSD-203ENST00000429746 KIF25-AS1Q9Y6Z4 181 aa11.88□□□□□ -0.51
CTSD-203ENST00000429746 A0A087WWL8 130 aa11.87□□□□□ -0.51
CTSD-203ENST00000429746 MUC21A0A0G2JKD1 596 aa11.87□□□□□ -0.51
CTSD-203ENST00000429746 MUC21A0A140T8X8 626 aa11.87□□□□□ -0.51
CTSD-203ENST00000429746 TIRAPP58753 221 aa11.87□□□□□ -0.51
CTSD-203ENST00000429746 LINC00315P59091 139 aa11.87□□□□□ -0.51
CTSD-203ENST00000429746 C1orf134Q5TEV5 83 aa11.87□□□□□ -0.51
CTSD-203ENST00000429746 SYT8Q8NBV8 401 aa11.87□□□□□ -0.51
CTSD-203ENST00000429746 SRSF3P84103 164 aaKnown RBP11.86□□□□□ -0.51
CTSD-203ENST00000429746 WFDC10BQ8IUB3 73 aa11.86□□□□□ -0.51
CTSD-203ENST00000429746 OR2D3Q8NGH3 330 aa11.86□□□□□ -0.51
CTSD-203ENST00000429746 RNASE7Q9H1E1 156 aaKnown RBP11.86□□□□□ -0.51
CTSD-203ENST00000429746 RHODO00212 210 aa11.85□□□□□ -0.51
CTSD-203ENST00000429746 LRP1BQ9NZR2 4599 aa11.84□□□□□ -0.51
CTSD-203ENST00000429746 A0A1W2PPQ1 181 aa11.84□□□□□ -0.51
CTSD-203ENST00000429746 SIVA1O15304 175 aa11.84□□□□□ -0.51
CTSD-203ENST00000429746 P01737 135 aa11.84□□□□□ -0.51
CTSD-203ENST00000429746 FAM74A4Q5TZK3 123 aa11.84□□□□□ -0.51
CTSD-203ENST00000429746 PRADC1Q9BSG0 188 aa11.84□□□□□ -0.51
CTSD-203ENST00000429746 MSRB1Q9NZV6 116 aa11.84□□□□□ -0.51
CTSD-203ENST00000429746 Q6ZRN7 208 aaPredicted RBP11.83□□□□□ -0.52
CTSD-203ENST00000429746 FER1L6-AS1Q8NA97 138 aa11.83□□□□□ -0.52
CTSD-203ENST00000429746 EIF5A2Q9GZV4 153 aaKnown RBP11.83□□□□□ -0.52
CTSD-203ENST00000429746 KIAA1109Q2LD37 5005 aa11.82□□□□□ -0.52
CTSD-203ENST00000429746 CTRLP40313 264 aa11.82□□□□□ -0.52
CTSD-203ENST00000429746 RPS20P60866 119 aaKnown RBP11.82□□□□□ -0.52
CTSD-203ENST00000429746 FAM231DQ6ZW35 169 aa11.82□□□□□ -0.52
CTSD-203ENST00000429746 SH2D6Q7Z4S9 175 aa11.82□□□□□ -0.52
CTSD-203ENST00000429746 LINC01551Q86U37 167 aa11.82□□□□□ -0.52
CTSD-203ENST00000429746 C6orf223Q8N319 242 aa11.82□□□□□ -0.52
CTSD-203ENST00000429746 GTSF1Q8WW33 167 aa11.82□□□□□ -0.52
CTSD-203ENST00000429746 CNFNQ9BYD5 112 aa11.82□□□□□ -0.52
CTSD-203ENST00000429746 BIN3Q9NQY0 253 aa11.82□□□□□ -0.52
CTSD-203ENST00000429746 LY96Q9Y6Y9 160 aa11.82□□□□□ -0.52
CTSD-203ENST00000429746 GAGE12JA6NER3 117 aa11.81□□□□□ -0.52
CTSD-203ENST00000429746 DNAH10OSP0CZ25 163 aa11.81□□□□□ -0.52
CTSD-203ENST00000429746 GAGE1Q13065 139 aa11.81□□□□□ -0.52
CTSD-203ENST00000429746 GAGE4Q13068 117 aa11.81□□□□□ -0.52
CTSD-203ENST00000429746 GAGE5Q13069 117 aa11.81□□□□□ -0.52
CTSD-203ENST00000429746 GAGE13Q4V321 117 aa11.81□□□□□ -0.52
CTSD-203ENST00000429746 LYZL1Q6UWQ5 148 aa11.81□□□□□ -0.52
CTSD-203ENST00000429746 DAZAP1Q96EP5 407 aaKnown RBP11.81□□□□□ -0.52
CTSD-203ENST00000429746 RPP21Q9H633 154 aaKnown RBP11.81□□□□□ -0.52
CTSD-203ENST00000429746 HERC2O95714 4834 aa11.81□□□□□ -0.52
CTSD-203ENST00000429746 TTC32Q5I0X7 151 aa11.8□□□□□ -0.52
CTSD-203ENST00000429746 SPANXN1Q5VSR9 72 aa11.8□□□□□ -0.52
CTSD-203ENST00000429746 ATP6V0E2Q8NHE4 81 aa11.8□□□□□ -0.52
CTSD-203ENST00000429746 SMIM7Q9BQ49 75 aa11.8□□□□□ -0.52
CTSD-203ENST00000429746 BTF3P20290 206 aaKnown RBP11.79□□□□□ -0.52
CTSD-203ENST00000429746 CEBPGP53567 150 aa11.79□□□□□ -0.52
CTSD-203ENST00000429746 TNP2Q05952 138 aa11.79□□□□□ -0.52
CTSD-203ENST00000429746 OR10G8Q8NGN5 311 aa11.79□□□□□ -0.52
CTSD-203ENST00000429746 GTSF1LQ9H1H1 148 aa11.79□□□□□ -0.52
CTSD-203ENST00000429746 TNFRSF18Q9Y5U5 241 aa11.79□□□□□ -0.52
CTSD-203ENST00000429746 RAB4BP61018 213 aa11.78□□□□□ -0.52
CTSD-203ENST00000429746 SSTP61278 116 aa11.78□□□□□ -0.52
CTSD-203ENST00000429746 IFITM2Q01629 132 aa11.78□□□□□ -0.52
CTSD-203ENST00000429746 LELP1Q5T871 98 aa11.78□□□□□ -0.52
CTSD-203ENST00000429746 TRBV10-1A0A0K0K1A3 114 aa11.77□□□□□ -0.53
CTSD-203ENST00000429746 ZNF727A8MUV8 499 aa11.77□□□□□ -0.53
CTSD-203ENST00000429746 UBE2D3P61077 147 aa11.77□□□□□ -0.53
CTSD-203ENST00000429746 UBE2D2P62837 147 aa11.77□□□□□ -0.53
CTSD-203ENST00000429746 Q8N3U1 123 aa11.77□□□□□ -0.53
CTSD-203ENST00000429746 NEXN-AS1Q8NBZ9 246 aa11.77□□□□□ -0.53
CTSD-203ENST00000429746 AP1S3Q96PC3 154 aa11.77□□□□□ -0.53
CTSD-203ENST00000429746 TPPP3Q9BW30 176 aa11.77□□□□□ -0.53
CTSD-203ENST00000429746 F2Z2F3 143 aa11.76□□□□□ -0.53
CTSD-203ENST00000429746 NTF3P20783 257 aa11.76□□□□□ -0.53
CTSD-203ENST00000429746 EVI2AP22794 236 aa11.76□□□□□ -0.53
CTSD-203ENST00000429746 CACNG7P62955 275 aa11.76□□□□□ -0.53
CTSD-203ENST00000429746 CT83Q5H943 113 aa11.76□□□□□ -0.53
CTSD-203ENST00000429746 WDR73Q6P4I2 378 aa11.76□□□□□ -0.53
CTSD-203ENST00000429746 XKRY2A2RUG3 117 aa11.75□□□□□ -0.53
CTSD-203ENST00000429746 FOXA3P55318 350 aaPredicted RBP11.75□□□□□ -0.53
CTSD-203ENST00000429746 RPL23P62829 140 aaKnown RBP11.75□□□□□ -0.53
CTSD-203ENST00000429746 LINC01556Q5JQF7 62 aa11.75□□□□□ -0.53
CTSD-203ENST00000429746 APOBP04114 4563 aaKnown RBP11.74□□□□□ -0.53
CTSD-203ENST00000429746 IGHV3-38A0A0C4DH36 116 aa11.74□□□□□ -0.53
CTSD-203ENST00000429746 M0QY20 66 aa11.74□□□□□ -0.53
CTSD-203ENST00000429746 GATCO43716 136 aaKnown RBP11.74□□□□□ -0.53
CTSD-203ENST00000429746 ZNF56Q15929 161 aa11.74□□□□□ -0.53
CTSD-203ENST00000429746 ISOC2Q96AB3 205 aa11.74□□□□□ -0.53
CTSD-203ENST00000429746 SMDT1Q9H4I9 107 aa11.74□□□□□ -0.53
CTSD-203ENST00000429746 OSTCQ9NRP0 149 aa11.74□□□□□ -0.53
CTSD-203ENST00000429746 V9GYV3 84 aa11.74□□□□□ -0.53
CTSD-203ENST00000429746 RYR1P21817 5038 aa11.74□□□□□ -0.53
CTSD-203ENST00000429746 TRBV7-3A0A075B6L6 115 aa11.73□□□□□ -0.53
CTSD-203ENST00000429746 SUMO4Q6EEV6 95 aa11.73□□□□□ -0.53
CTSD-203ENST00000429746 ERVFC1-1P60608 527 aa11.72□□□□□ -0.53
CTSD-203ENST00000429746 FAM74A3Q4VXF1 159 aa11.72□□□□□ -0.53
CTSD-203ENST00000429746 K7EP13 123 aa11.71□□□□□ -0.53
CTSD-203ENST00000429746 PEA15Q15121 130 aa11.71□□□□□ -0.53
CTSD-203ENST00000429746 TMEM241Q24JQ0 296 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms