RNA–Protein interactions for RNA: ENST00000429163.6

PDE6B-202, Transcript of phosphodiesterase 6B, humanhuman

TSL 2 BASIC

Gene PDE6B, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-202ENST00000429163 MAPKAPK5-AS1Q8N8E1 139 aa13.81□□□□□ -0.2
PDE6B-202ENST00000429163 PHLDA1Q8WV24 401 aaPredicted RBP13.81□□□□□ -0.2
PDE6B-202ENST00000429163 NRGNQ92686 78 aa13.81□□□□□ -0.2
PDE6B-202ENST00000429163 K7ERU9 68 aa13.81□□□□□ -0.2
PDE6B-202ENST00000429163 SPRY2O43597 315 aa13.81□□□□□ -0.2
PDE6B-202ENST00000429163 HOXD3P31249 432 aaPredicted RBP13.81□□□□□ -0.2
PDE6B-202ENST00000429163 SAMD5Q5TGI4 173 aa13.81□□□□□ -0.2
PDE6B-202ENST00000429163 CFAP46Q8IYW2 2715 aa13.8□□□□□ -0.2
PDE6B-202ENST00000429163 PMVKQ15126 192 aa13.8□□□□□ -0.2
PDE6B-202ENST00000429163 PIK3CD-AS1Q5SR53 167 aa13.8□□□□□ -0.2
PDE6B-202ENST00000429163 C10orf99Q6UWK7 81 aa13.8□□□□□ -0.2
PDE6B-202ENST00000429163 TTTY13Q9BZ97 58 aa13.8□□□□□ -0.2
PDE6B-202ENST00000429163 SVEP1Q4LDE5 3571 aa13.8□□□□□ -0.2
PDE6B-202ENST00000429163 TRPT1Q86TN4 253 aaKnown RBP13.79□□□□□ -0.2
PDE6B-202ENST00000429163 SDHAF1A6NFY7 115 aa13.79□□□□□ -0.2
PDE6B-202ENST00000429163 HERVK_113P61574 105 aa13.79□□□□□ -0.2
PDE6B-202ENST00000429163 NSUN5P1Q3KNT7 163 aa13.79□□□□□ -0.2
PDE6B-202ENST00000429163 AMTNQ6UX39 209 aa13.79□□□□□ -0.2
PDE6B-202ENST00000429163 Q8N1Y9 231 aa13.79□□□□□ -0.2
PDE6B-202ENST00000429163 SPCS1Q9Y6A9 102 aa13.79□□□□□ -0.2
PDE6B-202ENST00000429163 SPG11Q96JI7 2443 aa13.78□□□□□ -0.2
PDE6B-202ENST00000429163 TRBV7-3A0A075B6L6 115 aa13.78□□□□□ -0.2
PDE6B-202ENST00000429163 A0A1B0GWB2 263 aa13.78□□□□□ -0.2
PDE6B-202ENST00000429163 TP53TG1Q9Y2A0 90 aa13.78□□□□□ -0.2
PDE6B-202ENST00000429163 F5H697 171 aa13.78□□□□□ -0.2
PDE6B-202ENST00000429163 M0QY20 66 aa13.78□□□□□ -0.2
PDE6B-202ENST00000429163 CRYGDP07320 174 aa13.78□□□□□ -0.2
PDE6B-202ENST00000429163 TEX29Q8N6K0 151 aa13.78□□□□□ -0.2
PDE6B-202ENST00000429163 USP9XQ93008 2570 aaPredicted RBP13.77□□□□□ -0.21
PDE6B-202ENST00000429163 PTH2Q96A98 100 aa13.77□□□□□ -0.21
PDE6B-202ENST00000429163 RAB37Q96AX2 223 aa13.77□□□□□ -0.21
PDE6B-202ENST00000429163 HIST1H4GQ99525 98 aa13.76□□□□□ -0.21
PDE6B-202ENST00000429163 PEMTQ9UBM1 199 aa13.76□□□□□ -0.21
PDE6B-202ENST00000429163 DEFB113Q30KQ7 82 aa13.76□□□□□ -0.21
PDE6B-202ENST00000429163 TMEM86BQ8N661 226 aa13.76□□□□□ -0.21
PDE6B-202ENST00000429163 PRADC1Q9BSG0 188 aa13.76□□□□□ -0.21
PDE6B-202ENST00000429163 MDFICQ9P1T7 246 aa13.76□□□□□ -0.21
PDE6B-202ENST00000429163 CSPG4Q6UVK1 2322 aa13.75□□□□□ -0.21
PDE6B-202ENST00000429163 PRRC2AP48634 2157 aaKnown RBP13.75□□□□□ -0.21
PDE6B-202ENST00000429163 A0A087WWL8 130 aa13.75□□□□□ -0.21
PDE6B-202ENST00000429163 TSHBP01222 138 aa13.75□□□□□ -0.21
PDE6B-202ENST00000429163 TCTEX1D4Q5JR98 221 aa13.75□□□□□ -0.21
PDE6B-202ENST00000429163 Q5PR19 223 aa13.75□□□□□ -0.21
PDE6B-202ENST00000429163 JPT2Q9H910 190 aa13.75□□□□□ -0.21
PDE6B-202ENST00000429163 NHP2Q9NX24 153 aaKnown RBP13.75□□□□□ -0.21
PDE6B-202ENST00000429163 C11orf86A6NJI1 115 aa13.75□□□□□ -0.21
PDE6B-202ENST00000429163 HOXA3O43365 443 aaPredicted RBP13.75□□□□□ -0.21
PDE6B-202ENST00000429163 SPINK13Q1W4C9 94 aa13.75□□□□□ -0.21
PDE6B-202ENST00000429163 WFDC12Q8WWY7 111 aa13.75□□□□□ -0.21
PDE6B-202ENST00000429163 IGLV4-69A0A075B6H9 119 aa13.74□□□□□ -0.21
PDE6B-202ENST00000429163 TMEM238LA0A1B0GVL6 79 aa13.74□□□□□ -0.21
PDE6B-202ENST00000429163 A6NJY4 79 aa13.74□□□□□ -0.21
PDE6B-202ENST00000429163 COL12A1Q99715 3063 aa13.74□□□□□ -0.21
PDE6B-202ENST00000429163 TRAV12-2A0A075B6T6 113 aa13.73□□□□□ -0.21
PDE6B-202ENST00000429163 C12orf74Q32Q52 190 aa13.73□□□□□ -0.21
PDE6B-202ENST00000429163 ZNF876PQ49A33 203 aa13.73□□□□□ -0.21
PDE6B-202ENST00000429163 SPAG8Q99932 426 aaPredicted RBP13.73□□□□□ -0.21
PDE6B-202ENST00000429163 LINC00467Q9BRT7 94 aa13.73□□□□□ -0.21
PDE6B-202ENST00000429163 ZNF56Q15929 161 aa13.73□□□□□ -0.21
PDE6B-202ENST00000429163 NEGR1Q7Z3B1 354 aa13.73□□□□□ -0.21
PDE6B-202ENST00000429163 C4orf3Q8WVX3 66 aa13.73□□□□□ -0.21
PDE6B-202ENST00000429163 NFE4Q86UQ8 179 aa13.72□□□□□ -0.21
PDE6B-202ENST00000429163 IGLL5B9A064 214 aa13.72□□□□□ -0.21
PDE6B-202ENST00000429163 MORN3Q6PF18 240 aaPredicted RBP13.72□□□□□ -0.21
PDE6B-202ENST00000429163 SELENOKQ9Y6D0 94 aa13.72□□□□□ -0.21
PDE6B-202ENST00000429163 I3L3M4 83 aa13.71□□□□□ -0.21
PDE6B-202ENST00000429163 CRYBA4P53673 196 aa13.71□□□□□ -0.21
PDE6B-202ENST00000429163 SCGB2A2Q13296 93 aa13.71□□□□□ -0.21
PDE6B-202ENST00000429163 CLUHP3Q96NS8 147 aa13.71□□□□□ -0.21
PDE6B-202ENST00000429163 ZNF815PA8K554 130 aa13.7□□□□□ -0.22
PDE6B-202ENST00000429163 FAM74A4Q5TZK3 123 aa13.7□□□□□ -0.22
PDE6B-202ENST00000429163 ZNF462Q96JM2 2506 aa13.7□□□□□ -0.22
PDE6B-202ENST00000429163 IGKV3-20P01619 116 aa13.7□□□□□ -0.22
PDE6B-202ENST00000429163 FLNCQ14315 2725 aa13.7□□□□□ -0.22
PDE6B-202ENST00000429163 H3BMM0 161 aa13.69□□□□□ -0.22
PDE6B-202ENST00000429163 DUX5Q96PT3 197 aa13.69□□□□□ -0.22
PDE6B-202ENST00000429163 SPANXB1Q9NS25 103 aaPredicted RBP13.69□□□□□ -0.22
PDE6B-202ENST00000429163 VPS13CQ709C8 3753 aa13.69□□□□□ -0.22
PDE6B-202ENST00000429163 ZFHX3Q15911 3703 aa13.69□□□□□ -0.22
PDE6B-202ENST00000429163 CR1P17927 2039 aa13.69□□□□□ -0.22
PDE6B-202ENST00000429163 A8MWV9 139 aa13.69□□□□□ -0.22
PDE6B-202ENST00000429163 C20orf203Q8NBC4 194 aa13.69□□□□□ -0.22
PDE6B-202ENST00000429163 MAPK1IP1LQ8NDC0 245 aa13.69□□□□□ -0.22
PDE6B-202ENST00000429163 ZNF479Q96JC4 524 aa13.69□□□□□ -0.22
PDE6B-202ENST00000429163 NAA38Q9BRA0 125 aaKnown RBP13.68□□□□□ -0.22
PDE6B-202ENST00000429163 PYGO1Q9Y3Y4 419 aa13.68□□□□□ -0.22
PDE6B-202ENST00000429163 CELSR1Q9NYQ6 3014 aa13.68□□□□□ -0.22
PDE6B-202ENST00000429163 K7ERJ3 54 aa13.67□□□□□ -0.22
PDE6B-202ENST00000429163 RPL39P62891 51 aaKnown RBP13.67□□□□□ -0.22
PDE6B-202ENST00000429163 RRN3P1Q2M238 152 aa13.67□□□□□ -0.22
PDE6B-202ENST00000429163 F8W1H4 67 aa13.67□□□□□ -0.22
PDE6B-202ENST00000429163 DEFB131AP59861 70 aa13.67□□□□□ -0.22
PDE6B-202ENST00000429163 SCGB1D4Q6XE38 83 aa13.67□□□□□ -0.22
PDE6B-202ENST00000429163 ANKRD17O75179 2603 aaKnown RBP13.66□□□□□ -0.22
PDE6B-202ENST00000429163 M0R2P5 195 aa13.66□□□□□ -0.22
PDE6B-202ENST00000429163 SLURP1P55000 103 aa13.66□□□□□ -0.22
PDE6B-202ENST00000429163 ZNF415Q09FC8 603 aa13.66□□□□□ -0.22
PDE6B-202ENST00000429163 TRAV25A0A0B4J276 109 aa13.65□□□□□ -0.22
PDE6B-202ENST00000429163 CD300EQ496F6 205 aaPredicted RBP13.65□□□□□ -0.22
PDE6B-202ENST00000429163 G3V4G9 280 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms