RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 C16orf74Q96GX8 76 aa6.36□□□□□ -1.39
SMC6-204ENST00000428868 NOP10Q9NPE3 64 aaKnown RBP6.36□□□□□ -1.39
SMC6-204ENST00000428868 IGHV3-73A0A0B4J1V6 119 aa6.35□□□□□ -1.39
SMC6-204ENST00000428868 IGHV4-28A0A0C4DH34 117 aa6.35□□□□□ -1.39
SMC6-204ENST00000428868 D6R8Y8 96 aa6.35□□□□□ -1.39
SMC6-204ENST00000428868 S100A8P05109 93 aa6.35□□□□□ -1.39
SMC6-204ENST00000428868 CRYGDP07320 174 aa6.35□□□□□ -1.39
SMC6-204ENST00000428868 MGPP08493 103 aa6.35□□□□□ -1.39
SMC6-204ENST00000428868 EMP1P54849 157 aa6.35□□□□□ -1.39
SMC6-204ENST00000428868 LINC00310P59036 64 aa6.35□□□□□ -1.39
SMC6-204ENST00000428868 OR11H2Q8NH07 326 aa6.35□□□□□ -1.39
SMC6-204ENST00000428868 RNF183Q96D59 192 aa6.35□□□□□ -1.39
SMC6-204ENST00000428868 AP1S3Q96PC3 154 aa6.35□□□□□ -1.39
SMC6-204ENST00000428868 OVOL2Q9BRP0 275 aa6.35□□□□□ -1.39
SMC6-204ENST00000428868 ALKBH7Q9BT30 221 aaPredicted RBP6.35□□□□□ -1.39
SMC6-204ENST00000428868 PRKDCP78527 4128 aaKnown RBP6.35□□□□□ -1.39
SMC6-204ENST00000428868 COL7A1Q02388 2944 aa6.34□□□□□ -1.39
SMC6-204ENST00000428868 TRGV1A0A0A0MS02 117 aa6.34□□□□□ -1.39
SMC6-204ENST00000428868 UBE2CO00762 179 aa6.34□□□□□ -1.39
SMC6-204ENST00000428868 NUPR1O60356 82 aa6.34□□□□□ -1.39
SMC6-204ENST00000428868 NPYP01303 97 aa6.34□□□□□ -1.39
SMC6-204ENST00000428868 NDUFA6P56556 154 aa6.34□□□□□ -1.39
SMC6-204ENST00000428868 FAM74A4Q5TZK3 123 aa6.34□□□□□ -1.39
SMC6-204ENST00000428868 CFAP126Q5VTH2 177 aa6.34□□□□□ -1.39
SMC6-204ENST00000428868 UFSP1Q6NVU6 142 aa6.34□□□□□ -1.39
SMC6-204ENST00000428868 SBSPONQ8IVN8 264 aa6.34□□□□□ -1.39
SMC6-204ENST00000428868 Q8NAQ8 132 aa6.34□□□□□ -1.39
SMC6-204ENST00000428868 SYT8Q8NBV8 401 aa6.34□□□□□ -1.39
SMC6-204ENST00000428868 C18orf32Q8TCD1 76 aa6.34□□□□□ -1.39
SMC6-204ENST00000428868 URB1-AS1Q96HZ7 61 aa6.34□□□□□ -1.39
SMC6-204ENST00000428868 SPXQ9BT56 116 aa6.34□□□□□ -1.39
SMC6-204ENST00000428868 DPH3P1Q9H4G8 78 aa6.34□□□□□ -1.39
SMC6-204ENST00000428868 ZMAT5Q9UDW3 170 aaKnown RBP6.34□□□□□ -1.39
SMC6-204ENST00000428868 CELA1Q9UNI1 258 aa6.34□□□□□ -1.39
SMC6-204ENST00000428868 U3KQK5 164 aa6.34□□□□□ -1.39
SMC6-204ENST00000428868 RS1O15537 224 aa6.33□□□□□ -1.4
SMC6-204ENST00000428868 IGHV3-53P01767 116 aa6.33□□□□□ -1.4
SMC6-204ENST00000428868 SUMO4Q6EEV6 95 aa6.33□□□□□ -1.4
SMC6-204ENST00000428868 Q6ZSN1 163 aa6.33□□□□□ -1.4
SMC6-204ENST00000428868 Q6ZWC4 215 aa6.33□□□□□ -1.4
SMC6-204ENST00000428868 NRACQ8N912 160 aa6.33□□□□□ -1.4
SMC6-204ENST00000428868 PTH2Q96A98 100 aa6.33□□□□□ -1.4
SMC6-204ENST00000428868 RPL39LQ96EH5 51 aaKnown RBP6.33□□□□□ -1.4
SMC6-204ENST00000428868 Q9UF83 564 aa6.33□□□□□ -1.4
SMC6-204ENST00000428868 GAGE12BA1L429 117 aa6.32□□□□□ -1.4
SMC6-204ENST00000428868 GAGE7O76087 117 aa6.32□□□□□ -1.4
SMC6-204ENST00000428868 GAGE12FP0CL80 117 aa6.32□□□□□ -1.4
SMC6-204ENST00000428868 GAGE12GP0CL81 117 aa6.32□□□□□ -1.4
SMC6-204ENST00000428868 GAGE12IP0CL82 117 aa6.32□□□□□ -1.4
SMC6-204ENST00000428868 P0DMU3 169 aa6.32□□□□□ -1.4
SMC6-204ENST00000428868 FAM231AP0DMU4 169 aa6.32□□□□□ -1.4
SMC6-204ENST00000428868 FAM231CP0DMU5 169 aa6.32□□□□□ -1.4
SMC6-204ENST00000428868 CKS2P33552 79 aa6.32□□□□□ -1.4
SMC6-204ENST00000428868 DAZ2Q13117 558 aaKnown RBP6.32□□□□□ -1.4
SMC6-204ENST00000428868 SMIM15Q7Z3B0 74 aa6.32□□□□□ -1.4
SMC6-204ENST00000428868 MRAPQ8TCY5 172 aa6.32□□□□□ -1.4
SMC6-204ENST00000428868 RASL10AQ92737 203 aa6.32□□□□□ -1.4
SMC6-204ENST00000428868 ZNF479Q96JC4 524 aa6.32□□□□□ -1.4
SMC6-204ENST00000428868 PRELID3AQ96N28 172 aa6.32□□□□□ -1.4
SMC6-204ENST00000428868 C5orf52A6NGY3 159 aa6.31□□□□□ -1.4
SMC6-204ENST00000428868 SMIM9A6NGZ8 99 aa6.31□□□□□ -1.4
SMC6-204ENST00000428868 SERF1AO75920 110 aa6.31□□□□□ -1.4
SMC6-204ENST00000428868 SMIM17P0DL12 118 aa6.31□□□□□ -1.4
SMC6-204ENST00000428868 SNRPEP62304 92 aaKnown RBP6.31□□□□□ -1.4
SMC6-204ENST00000428868 ZNF56Q15929 161 aa6.31□□□□□ -1.4
SMC6-204ENST00000428868 PDZD11Q5EBL8 140 aa6.31□□□□□ -1.4
SMC6-204ENST00000428868 DEFB121Q5J5C9 76 aa6.31□□□□□ -1.4
SMC6-204ENST00000428868 LCE2DQ5TA82 110 aaPredicted RBP6.31□□□□□ -1.4
SMC6-204ENST00000428868 FAM222AQ5U5X8 452 aa6.31□□□□□ -1.4
SMC6-204ENST00000428868 ORMDL3Q8N138 153 aa6.31□□□□□ -1.4
SMC6-204ENST00000428868 LINC00612Q8N6U2 182 aa6.31□□□□□ -1.4
SMC6-204ENST00000428868 LOC389332A0A1B0GUA5 103 aa6.3□□□□□ -1.4
SMC6-204ENST00000428868 IFITM10A6NMD0 228 aa6.3□□□□□ -1.4
SMC6-204ENST00000428868 A8MWV9 139 aa6.3□□□□□ -1.4
SMC6-204ENST00000428868 F5H697 171 aa6.3□□□□□ -1.4
SMC6-204ENST00000428868 TNFRSF6BO95407 300 aa6.3□□□□□ -1.4
SMC6-204ENST00000428868 MIFP14174 115 aa6.3□□□□□ -1.4
SMC6-204ENST00000428868 Q0VG73 95 aa6.3□□□□□ -1.4
SMC6-204ENST00000428868 LGALS9BQ3B8N2 356 aa6.3□□□□□ -1.4
SMC6-204ENST00000428868 PIK3CD-AS1Q5SR53 167 aa6.3□□□□□ -1.4
SMC6-204ENST00000428868 DEFB104AQ8WTQ1 72 aa6.3□□□□□ -1.4
SMC6-204ENST00000428868 MRAP2Q96G30 205 aa6.3□□□□□ -1.4
SMC6-204ENST00000428868 DKK2Q9UBU2 259 aa6.3□□□□□ -1.4
SMC6-204ENST00000428868 TRAV4A0A0B4J268 109 aa6.29□□□□□ -1.4
SMC6-204ENST00000428868 LOC105371267A0A1B0GV96 52 aa6.29□□□□□ -1.4
SMC6-204ENST00000428868 M0QY20 66 aa6.29□□□□□ -1.4
SMC6-204ENST00000428868 DEFB130BP0DP73 79 aa6.29□□□□□ -1.4
SMC6-204ENST00000428868 DEFB130AP0DP74 79 aa6.29□□□□□ -1.4
SMC6-204ENST00000428868 IFI27P40305 119 aaPredicted RBP6.29□□□□□ -1.4
SMC6-204ENST00000428868 OR10J3Q5JRS4 329 aa6.29□□□□□ -1.4
SMC6-204ENST00000428868 COA6Q5JTJ3 125 aaKnown RBP6.29□□□□□ -1.4
SMC6-204ENST00000428868 NEGR1Q7Z3B1 354 aa6.29□□□□□ -1.4
SMC6-204ENST00000428868 BAGE3Q86Y29 109 aa6.29□□□□□ -1.4
SMC6-204ENST00000428868 HIST3H2BBQ8N257 126 aa6.29□□□□□ -1.4
SMC6-204ENST00000428868 OR4C5Q8NGB2 326 aa6.29□□□□□ -1.4
SMC6-204ENST00000428868 TM2D3Q9BRN9 247 aa6.29□□□□□ -1.4
SMC6-204ENST00000428868 TP53TG1Q9Y2A0 90 aa6.29□□□□□ -1.4
SMC6-204ENST00000428868 IGLV2-18A0A075B6J9 118 aa6.28□□□□□ -1.4
SMC6-204ENST00000428868 S100A6P06703 90 aa6.28□□□□□ -1.4
SMC6-204ENST00000428868 HOXA5P20719 270 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms