RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 TMEM167BQ9NRX6 74 aa11.83□□□□□ -0.52
UPK3BP1-201ENST00000428678 ARL2-SNX15V9GYD0 113 aa11.83□□□□□ -0.52
UPK3BP1-201ENST00000428678 USP17L23D6RBM5 183 aa11.82□□□□□ -0.52
UPK3BP1-201ENST00000428678 M0R036 132 aa11.82□□□□□ -0.52
UPK3BP1-201ENST00000428678 RPL36AP83881 106 aaKnown RBP11.82□□□□□ -0.52
UPK3BP1-201ENST00000428678 C15orf54Q8N8G6 183 aa11.82□□□□□ -0.52
UPK3BP1-201ENST00000428678 RPL36ALQ969Q0 106 aaKnown RBP11.82□□□□□ -0.52
UPK3BP1-201ENST00000428678 GRIFINA4D1Z8 144 aa11.81□□□□□ -0.52
UPK3BP1-201ENST00000428678 CXorf1O96002 111 aa11.81□□□□□ -0.52
UPK3BP1-201ENST00000428678 HLA-DQA1P01909 254 aa11.81□□□□□ -0.52
UPK3BP1-201ENST00000428678 ENHOQ6UWT2 76 aa11.81□□□□□ -0.52
UPK3BP1-201ENST00000428678 SFRP2Q96HF1 295 aa11.81□□□□□ -0.52
UPK3BP1-201ENST00000428678 NDUFA13Q9P0J0 144 aa11.81□□□□□ -0.52
UPK3BP1-201ENST00000428678 TRBV10-1A0A0K0K1A3 114 aa11.8□□□□□ -0.52
UPK3BP1-201ENST00000428678 KRBOX1C9JBD0 128 aa11.8□□□□□ -0.52
UPK3BP1-201ENST00000428678 M0R381 172 aa11.8□□□□□ -0.52
UPK3BP1-201ENST00000428678 UPK1BO75841 260 aa11.8□□□□□ -0.52
UPK3BP1-201ENST00000428678 IFNA7P01567 189 aa11.8□□□□□ -0.52
UPK3BP1-201ENST00000428678 UBE2D3P61077 147 aa11.8□□□□□ -0.52
UPK3BP1-201ENST00000428678 UBE2D2P62837 147 aa11.8□□□□□ -0.52
UPK3BP1-201ENST00000428678 S100ZQ8WXG8 99 aa11.8□□□□□ -0.52
UPK3BP1-201ENST00000428678 PHLDA3Q9Y5J5 127 aa11.8□□□□□ -0.52
UPK3BP1-201ENST00000428678 TRBV7-3A0A075B6L6 115 aa11.79□□□□□ -0.52
UPK3BP1-201ENST00000428678 MBP02144 154 aa11.79□□□□□ -0.52
UPK3BP1-201ENST00000428678 ANGP03950 147 aaKnown RBP11.79□□□□□ -0.52
UPK3BP1-201ENST00000428678 MT1HL1P0DM35 61 aa11.79□□□□□ -0.52
UPK3BP1-201ENST00000428678 TPT1P13693 172 aaKnown RBP11.79□□□□□ -0.52
UPK3BP1-201ENST00000428678 DNLZQ5SXM8 178 aa11.79□□□□□ -0.52
UPK3BP1-201ENST00000428678 Q86TA4 180 aa11.79□□□□□ -0.52
UPK3BP1-201ENST00000428678 A0A1W2PRE2 83 aa11.78□□□□□ -0.52
UPK3BP1-201ENST00000428678 PRSS1P07477 247 aa11.78□□□□□ -0.52
UPK3BP1-201ENST00000428678 ATP6V0CP27449 155 aa11.78□□□□□ -0.52
UPK3BP1-201ENST00000428678 MPV17L2Q567V2 206 aa11.78□□□□□ -0.52
UPK3BP1-201ENST00000428678 ZC2HC1AQ96GY0 325 aa11.78□□□□□ -0.52
UPK3BP1-201ENST00000428678 MARVELD1Q9BSK0 173 aa11.78□□□□□ -0.52
UPK3BP1-201ENST00000428678 PSMG3Q9BT73 122 aaPredicted RBP11.78□□□□□ -0.52
UPK3BP1-201ENST00000428678 ACTR3CQ9C0K3 210 aaPredicted RBP11.78□□□□□ -0.52
UPK3BP1-201ENST00000428678 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.78□□□□□ -0.52
UPK3BP1-201ENST00000428678 LRP2P98164 4655 aa11.77□□□□□ -0.53
UPK3BP1-201ENST00000428678 TMSB15BA0A087X1C1 80 aa11.77□□□□□ -0.53
UPK3BP1-201ENST00000428678 TRBV6-8A0A0A6YYG3 113 aa11.77□□□□□ -0.53
UPK3BP1-201ENST00000428678 PEX7O00628 323 aa11.77□□□□□ -0.53
UPK3BP1-201ENST00000428678 SH2D1AO60880 128 aa11.77□□□□□ -0.53
UPK3BP1-201ENST00000428678 CRIP1P50238 77 aa11.77□□□□□ -0.53
UPK3BP1-201ENST00000428678 DGAT2L7PQ6IED9 249 aa11.77□□□□□ -0.53
UPK3BP1-201ENST00000428678 LINC00299Q6ZSB3 139 aa11.77□□□□□ -0.53
UPK3BP1-201ENST00000428678 UBE2G2P60604 165 aa11.76□□□□□ -0.53
UPK3BP1-201ENST00000428678 SERF2P84101 59 aa11.76□□□□□ -0.53
UPK3BP1-201ENST00000428678 IFITM3Q01628 133 aa11.76□□□□□ -0.53
UPK3BP1-201ENST00000428678 ZFP82Q8N141 532 aa11.76□□□□□ -0.53
UPK3BP1-201ENST00000428678 C9orf163Q8N9P6 203 aa11.76□□□□□ -0.53
UPK3BP1-201ENST00000428678 PANO1I0J062 215 aa11.75□□□□□ -0.53
UPK3BP1-201ENST00000428678 FAM162BQ5T6X4 162 aa11.75□□□□□ -0.53
UPK3BP1-201ENST00000428678 CHCHD5Q9BSY4 110 aa11.75□□□□□ -0.53
UPK3BP1-201ENST00000428678 RNF213Q63HN8 5207 aa11.75□□□□□ -0.53
UPK3BP1-201ENST00000428678 A0A0D9SG52 128 aa11.74□□□□□ -0.53
UPK3BP1-201ENST00000428678 PTTG1O95997 202 aa11.74□□□□□ -0.53
UPK3BP1-201ENST00000428678 MIAQ16674 131 aa11.74□□□□□ -0.53
UPK3BP1-201ENST00000428678 Q6ZRU5 148 aa11.74□□□□□ -0.53
UPK3BP1-201ENST00000428678 OR10G8Q8NGN5 311 aa11.74□□□□□ -0.53
UPK3BP1-201ENST00000428678 TNFSF18Q9UNG2 199 aa11.74□□□□□ -0.53
UPK3BP1-201ENST00000428678 PKIAP61925 76 aa11.73□□□□□ -0.53
UPK3BP1-201ENST00000428678 ZNF56Q15929 161 aa11.73□□□□□ -0.53
UPK3BP1-201ENST00000428678 CLPSL2Q6UWE3 100 aa11.73□□□□□ -0.53
UPK3BP1-201ENST00000428678 RPL19P84098 196 aaKnown RBP11.72□□□□□ -0.53
UPK3BP1-201ENST00000428678 SDIM1Q6ZPB5 146 aa11.72□□□□□ -0.53
UPK3BP1-201ENST00000428678 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.72□□□□□ -0.53
UPK3BP1-201ENST00000428678 NEXN-AS1Q8NBZ9 246 aa11.72□□□□□ -0.53
UPK3BP1-201ENST00000428678 HIST1H2BAQ96A08 127 aa11.72□□□□□ -0.53
UPK3BP1-201ENST00000428678 ZFP30Q9Y2G7 519 aa11.72□□□□□ -0.53
UPK3BP1-201ENST00000428678 RAB4BP61018 213 aa11.71□□□□□ -0.53
UPK3BP1-201ENST00000428678 LINC01559Q495D7 138 aa11.71□□□□□ -0.53
UPK3BP1-201ENST00000428678 COX8CQ7Z4L0 72 aa11.71□□□□□ -0.53
UPK3BP1-201ENST00000428678 FAM74A7A6NL05 159 aa11.7□□□□□ -0.54
UPK3BP1-201ENST00000428678 UBE2G1P62253 170 aa11.7□□□□□ -0.54
UPK3BP1-201ENST00000428678 ZNF726P1Q15940 193 aa11.7□□□□□ -0.54
UPK3BP1-201ENST00000428678 ZNF674Q2M3X9 581 aa11.7□□□□□ -0.54
UPK3BP1-201ENST00000428678 AQP10Q96PS8 301 aa11.7□□□□□ -0.54
UPK3BP1-201ENST00000428678 CTXND1A0A1B0GTU2 59 aa11.69□□□□□ -0.54
UPK3BP1-201ENST00000428678 LINC00269Q8N2A0 174 aa11.69□□□□□ -0.54
UPK3BP1-201ENST00000428678 FMC1Q96HJ9 113 aa11.69□□□□□ -0.54
UPK3BP1-201ENST00000428678 NKX6-2Q9C056 277 aaPredicted RBP11.69□□□□□ -0.54
UPK3BP1-201ENST00000428678 PRR34Q9NV39 138 aa11.69□□□□□ -0.54
UPK3BP1-201ENST00000428678 TNXBP22105 4242 aa11.68□□□□□ -0.54
UPK3BP1-201ENST00000428678 RBX1P62877 108 aa11.68□□□□□ -0.54
UPK3BP1-201ENST00000428678 GAGE6Q13070 117 aa11.68□□□□□ -0.54
UPK3BP1-201ENST00000428678 PRR27Q6MZM9 219 aa11.68□□□□□ -0.54
UPK3BP1-201ENST00000428678 KRTAP26-1Q6PEX3 210 aa11.68□□□□□ -0.54
UPK3BP1-201ENST00000428678 DPH3Q96FX2 82 aa11.68□□□□□ -0.54
UPK3BP1-201ENST00000428678 DEFA1P59665 94 aa11.67□□□□□ -0.54
UPK3BP1-201ENST00000428678 DEFA3P59666 94 aa11.67□□□□□ -0.54
UPK3BP1-201ENST00000428678 CLRN3Q8NCR9 226 aa11.67□□□□□ -0.54
UPK3BP1-201ENST00000428678 hDV102S1A0JD36 115 aa11.66□□□□□ -0.54
UPK3BP1-201ENST00000428678 F5H697 171 aa11.66□□□□□ -0.54
UPK3BP1-201ENST00000428678 CIRBPQ14011 172 aaKnown RBP11.66□□□□□ -0.54
UPK3BP1-201ENST00000428678 TMEM97Q5BJF2 176 aa11.66□□□□□ -0.54
UPK3BP1-201ENST00000428678 NTM-AS1Q6ZSK4 140 aa11.66□□□□□ -0.54
UPK3BP1-201ENST00000428678 OR10AG1Q8NH19 301 aa11.66□□□□□ -0.54
UPK3BP1-201ENST00000428678 IGLV10-54A0A075B6I4 117 aa11.65□□□□□ -0.54
UPK3BP1-201ENST00000428678 A6NHS1 94 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms