RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 SCO2A0A1W2PP80 73 aa10.24□□□□□ -0.77
PHF1-204ENST00000427826 GRIFINA4D1Z8 144 aa10.24□□□□□ -0.77
PHF1-204ENST00000427826 UFSP1Q6NVU6 142 aa10.24□□□□□ -0.77
PHF1-204ENST00000427826 SCRT2Q9NQ03 307 aa10.24□□□□□ -0.77
PHF1-204ENST00000427826 A0A087WTM6 91 aa10.23□□□□□ -0.77
PHF1-204ENST00000427826 IBA57-AS1B1ANH7 110 aa10.23□□□□□ -0.77
PHF1-204ENST00000427826 Q6ZSN1 163 aa10.23□□□□□ -0.77
PHF1-204ENST00000427826 ZFP82Q8N141 532 aa10.23□□□□□ -0.77
PHF1-204ENST00000427826 MAPKAPK5-AS1Q8N8E1 139 aa10.23□□□□□ -0.77
PHF1-204ENST00000427826 A0A087WWC5 75 aa10.22□□□□□ -0.77
PHF1-204ENST00000427826 TMSB15BA0A087X1C1 80 aa10.22□□□□□ -0.77
PHF1-204ENST00000427826 GAGE12JA6NER3 117 aa10.22□□□□□ -0.77
PHF1-204ENST00000427826 PSCAO43653 123 aa10.22□□□□□ -0.77
PHF1-204ENST00000427826 NKX2-5P52952 324 aaPredicted RBP10.22□□□□□ -0.77
PHF1-204ENST00000427826 CCL20P78556 96 aa10.22□□□□□ -0.77
PHF1-204ENST00000427826 GAGE1Q13065 139 aa10.22□□□□□ -0.77
PHF1-204ENST00000427826 GAGE4Q13068 117 aa10.22□□□□□ -0.77
PHF1-204ENST00000427826 GAGE5Q13069 117 aa10.22□□□□□ -0.77
PHF1-204ENST00000427826 GAGE13Q4V321 117 aa10.22□□□□□ -0.77
PHF1-204ENST00000427826 BAGE2Q86Y30 109 aa10.22□□□□□ -0.77
PHF1-204ENST00000427826 SFRP2Q96HF1 295 aa10.22□□□□□ -0.77
PHF1-204ENST00000427826 SAMD10Q9BYL1 202 aa10.22□□□□□ -0.77
PHF1-204ENST00000427826 JPT2Q9H910 190 aa10.22□□□□□ -0.77
PHF1-204ENST00000427826 M0R381 172 aa10.21□□□□□ -0.77
PHF1-204ENST00000427826 TAGLN2P37802 199 aaKnown RBP10.21□□□□□ -0.77
PHF1-204ENST00000427826 ALKAL2Q6UX46 152 aa10.21□□□□□ -0.77
PHF1-204ENST00000427826 IGHV3-30P01768 117 aa10.2□□□□□ -0.78
PHF1-204ENST00000427826 IGHV3-33P01772 117 aa10.2□□□□□ -0.78
PHF1-204ENST00000427826 CXCL1P09341 107 aa10.2□□□□□ -0.78
PHF1-204ENST00000427826 LINC00694P0DN24 101 aa10.2□□□□□ -0.78
PHF1-204ENST00000427826 IGHV3-30-3P0DP02 117 aa10.2□□□□□ -0.78
PHF1-204ENST00000427826 IGHV3-30-5P0DP03 117 aa10.2□□□□□ -0.78
PHF1-204ENST00000427826 BCL2P10415 239 aa10.2□□□□□ -0.78
PHF1-204ENST00000427826 BLOC1S1P78537 153 aa10.2□□□□□ -0.78
PHF1-204ENST00000427826 MEF2BQ02080 365 aaPredicted RBP10.2□□□□□ -0.78
PHF1-204ENST00000427826 LAGE3Q14657 143 aa10.2□□□□□ -0.78
PHF1-204ENST00000427826 FAM74A4Q5TZK3 123 aa10.2□□□□□ -0.78
PHF1-204ENST00000427826 C14orf178Q8N769 122 aaPredicted RBP10.2□□□□□ -0.78
PHF1-204ENST00000427826 C11orf52Q96A22 123 aa10.2□□□□□ -0.78
PHF1-204ENST00000427826 MLST8Q9BVC4 326 aa10.2□□□□□ -0.78
PHF1-204ENST00000427826 Q8N1X5 172 aa10.19□□□□□ -0.78
PHF1-204ENST00000427826 APOBP04114 4563 aaKnown RBP10.18□□□□□ -0.78
PHF1-204ENST00000427826 A0A087WWL8 130 aa10.18□□□□□ -0.78
PHF1-204ENST00000427826 TRBV10-1A0A0K0K1A3 114 aa10.18□□□□□ -0.78
PHF1-204ENST00000427826 PDE6DO43924 150 aa10.18□□□□□ -0.78
PHF1-204ENST00000427826 RPL35P42766 123 aaKnown RBP10.18□□□□□ -0.78
PHF1-204ENST00000427826 TM2D2Q9BX73 214 aa10.18□□□□□ -0.78
PHF1-204ENST00000427826 Q9HAA7 133 aa10.18□□□□□ -0.78
PHF1-204ENST00000427826 VAX2Q9UIW0 290 aa10.18□□□□□ -0.78
PHF1-204ENST00000427826 TOR2AQ5JU69 321 aa10.17□□□□□ -0.78
PHF1-204ENST00000427826 TRAV8-3A0A0A6YYJ7 113 aa10.16□□□□□ -0.78
PHF1-204ENST00000427826 RPL36AP83881 106 aaKnown RBP10.16□□□□□ -0.78
PHF1-204ENST00000427826 PRR27Q6MZM9 219 aa10.16□□□□□ -0.78
PHF1-204ENST00000427826 NTN5Q8WTR8 489 aaPredicted RBP10.16□□□□□ -0.78
PHF1-204ENST00000427826 RPL36ALQ969Q0 106 aaKnown RBP10.16□□□□□ -0.78
PHF1-204ENST00000427826 KRTAP4-5Q9BYR2 181 aa10.16□□□□□ -0.78
PHF1-204ENST00000427826 MED9Q9NWA0 146 aa10.16□□□□□ -0.78
PHF1-204ENST00000427826 Q9UF83 564 aa10.16□□□□□ -0.78
PHF1-204ENST00000427826 URGCP-MRPS24S4R325 110 aa10.16□□□□□ -0.78
PHF1-204ENST00000427826 LRCOL1A6NCL2 159 aa10.15□□□□□ -0.78
PHF1-204ENST00000427826 OR5AL1P0C617 328 aa10.15□□□□□ -0.78
PHF1-204ENST00000427826 RAB4BP61018 213 aa10.15□□□□□ -0.78
PHF1-204ENST00000427826 RPL19P84098 196 aaKnown RBP10.15□□□□□ -0.78
PHF1-204ENST00000427826 CENPWQ5EE01 88 aa10.15□□□□□ -0.78
PHF1-204ENST00000427826 DERL1Q9BUN8 251 aa10.15□□□□□ -0.78
PHF1-204ENST00000427826 SSBP4Q9BWG4 385 aaPredicted RBP10.15□□□□□ -0.78
PHF1-204ENST00000427826 ABCA13Q86UQ4 5058 aa10.15□□□□□ -0.78
PHF1-204ENST00000427826 TRBV7-3A0A075B6L6 115 aa10.14□□□□□ -0.79
PHF1-204ENST00000427826 SNAI2O43623 268 aa10.14□□□□□ -0.79
PHF1-204ENST00000427826 GCSHP23434 173 aa10.14□□□□□ -0.79
PHF1-204ENST00000427826 FUSP35637 526 aaKnown RBP eCLIP10.14□□□□□ -0.79
PHF1-204ENST00000427826 GNG4P50150 75 aa10.14□□□□□ -0.79
PHF1-204ENST00000427826 SPANXN1Q5VSR9 72 aa10.14□□□□□ -0.79
PHF1-204ENST00000427826 SMIM12Q96EX1 92 aa10.14□□□□□ -0.79
PHF1-204ENST00000427826 KCNIP4Q6PIL6 250 aa10.13□□□□□ -0.79
PHF1-204ENST00000427826 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.13□□□□□ -0.79
PHF1-204ENST00000427826 OR10G8Q8NGN5 311 aa10.13□□□□□ -0.79
PHF1-204ENST00000427826 OR10AG1Q8NH19 301 aa10.13□□□□□ -0.79
PHF1-204ENST00000427826 DAZAP1Q96EP5 407 aaKnown RBP10.13□□□□□ -0.79
PHF1-204ENST00000427826 BIN3Q9NQY0 253 aa10.13□□□□□ -0.79
PHF1-204ENST00000427826 COX11Q9Y6N1 276 aa10.13□□□□□ -0.79
PHF1-204ENST00000427826 IGLV5-52A0A0A0MRZ9 124 aa10.12□□□□□ -0.79
PHF1-204ENST00000427826 KRTAP10-1P60331 282 aa10.12□□□□□ -0.79
PHF1-204ENST00000427826 UBE2D3P61077 147 aa10.12□□□□□ -0.79
PHF1-204ENST00000427826 UBE2D2P62837 147 aa10.12□□□□□ -0.79
PHF1-204ENST00000427826 ELOBQ15370 118 aa10.12□□□□□ -0.79
PHF1-204ENST00000427826 ZNF56Q15929 161 aa10.12□□□□□ -0.79
PHF1-204ENST00000427826 DAZ4Q86SG3 579 aaKnown RBP10.12□□□□□ -0.79
PHF1-204ENST00000427826 Q8N814 137 aa10.12□□□□□ -0.79
PHF1-204ENST00000427826 RMI2Q96E14 147 aa10.12□□□□□ -0.79
PHF1-204ENST00000427826 CHCHD7Q9BUK0 85 aa10.12□□□□□ -0.79
PHF1-204ENST00000427826 DAZ3Q9NR90 486 aaKnown RBP10.12□□□□□ -0.79
PHF1-204ENST00000427826 A0A087WX48 190 aa10.11□□□□□ -0.79
PHF1-204ENST00000427826 RAB19A4D1S5 217 aa10.11□□□□□ -0.79
PHF1-204ENST00000427826 RBFOX3A6NFN3 312 aa10.11□□□□□ -0.79
PHF1-204ENST00000427826 SMIM17P0DL12 118 aa10.11□□□□□ -0.79
PHF1-204ENST00000427826 RPS20P60866 119 aaKnown RBP10.11□□□□□ -0.79
PHF1-204ENST00000427826 NIT1Q86X76 327 aa10.11□□□□□ -0.79
PHF1-204ENST00000427826 LYPD6BQ8NI32 183 aa10.11□□□□□ -0.79
PHF1-204ENST00000427826 XKRY2A2RUG3 117 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms