RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 C10orf99Q6UWK7 81 aa10.15□□□□□ -0.78
SPG11-202ENST00000427534 PLA2G2EQ9NZK7 142 aa10.15□□□□□ -0.79
SPG11-202ENST00000427534 MDFICQ9P1T7 246 aa10.15□□□□□ -0.79
SPG11-202ENST00000427534 C4orf3Q8WVX3 66 aa10.14□□□□□ -0.79
SPG11-202ENST00000427534 ZNF106Q9H2Y7 1883 aaKnown RBP10.14□□□□□ -0.79
SPG11-202ENST00000427534 TRAV13-2A0A0B4J235 113 aa10.14□□□□□ -0.79
SPG11-202ENST00000427534 LTAP01374 205 aa10.14□□□□□ -0.79
SPG11-202ENST00000427534 ZNF843Q8N446 348 aa10.14□□□□□ -0.79
SPG11-202ENST00000427534 CRYBA4P53673 196 aa10.14□□□□□ -0.79
SPG11-202ENST00000427534 H3BUA1 57 aa10.14□□□□□ -0.79
SPG11-202ENST00000427534 PCP2Q8IVA1 136 aa10.14□□□□□ -0.79
SPG11-202ENST00000427534 K7EIM0 57 aa10.13□□□□□ -0.79
SPG11-202ENST00000427534 LY6G6CO95867 125 aa10.13□□□□□ -0.79
SPG11-202ENST00000427534 LYPD6Q86Y78 171 aa10.13□□□□□ -0.79
SPG11-202ENST00000427534 MED13LQ71F56 2210 aa10.13□□□□□ -0.79
SPG11-202ENST00000427534 LY6G6DO95868 133 aa10.13□□□□□ -0.79
SPG11-202ENST00000427534 C2orf16Q68DN1 1984 aa10.13□□□□□ -0.79
SPG11-202ENST00000427534 I3L2K1 104 aa10.13□□□□□ -0.79
SPG11-202ENST00000427534 CTSGP08311 255 aa10.13□□□□□ -0.79
SPG11-202ENST00000427534 SIRPDQ9H106 197 aa10.13□□□□□ -0.79
SPG11-202ENST00000427534 C14orf132Q9NPU4 83 aa10.13□□□□□ -0.79
SPG11-202ENST00000427534 UBE2V1Q13404 147 aa10.13□□□□□ -0.79
SPG11-202ENST00000427534 HRCT1Q6UXD1 115 aa10.13□□□□□ -0.79
SPG11-202ENST00000427534 FOXI1Q12951 378 aa10.12□□□□□ -0.79
SPG11-202ENST00000427534 TNRC6AQ8NDV7 1962 aaKnown RBP10.12□□□□□ -0.79
SPG11-202ENST00000427534 A0A0J9YXV3 536 aa10.12□□□□□ -0.79
SPG11-202ENST00000427534 H0Y9J4 135 aa10.12□□□□□ -0.79
SPG11-202ENST00000427534 IGKV1-17P01599 117 aa10.12□□□□□ -0.79
SPG11-202ENST00000427534 GPHB5Q86YW7 130 aa10.12□□□□□ -0.79
SPG11-202ENST00000427534 BAALC-AS2P0C853 105 aa10.12□□□□□ -0.79
SPG11-202ENST00000427534 ZFP2Q6ZN57 461 aa10.12□□□□□ -0.79
SPG11-202ENST00000427534 LINC00173Q6ZV60 143 aa10.12□□□□□ -0.79
SPG11-202ENST00000427534 PRO1854Q9UHT4 67 aa10.12□□□□□ -0.79
SPG11-202ENST00000427534 IGLC2P0DOY2 106 aa10.12□□□□□ -0.79
SPG11-202ENST00000427534 IGLC3P0DOY3 106 aa10.12□□□□□ -0.79
SPG11-202ENST00000427534 PRORYQ9H606 182 aa10.12□□□□□ -0.79
SPG11-202ENST00000427534 INAFM2P0DMQ5 153 aa10.11□□□□□ -0.79
SPG11-202ENST00000427534 TANC2Q9HCD6 1990 aa10.11□□□□□ -0.79
SPG11-202ENST00000427534 PCNX2A6NKB5 2137 aa10.11□□□□□ -0.79
SPG11-202ENST00000427534 TMEM61Q8N0U2 210 aa10.11□□□□□ -0.79
SPG11-202ENST00000427534 IGKV3D-7A0A0C4DH55 119 aa10.11□□□□□ -0.79
SPG11-202ENST00000427534 ETDBQ3ZM63 59 aa10.11□□□□□ -0.79
SPG11-202ENST00000427534 GAGE12HA6NDE8 117 aa10.11□□□□□ -0.79
SPG11-202ENST00000427534 IGHV4-31P0DP07 118 aa10.11□□□□□ -0.79
SPG11-202ENST00000427534 MRPL36Q9P0J6 103 aaKnown RBP10.11□□□□□ -0.79
SPG11-202ENST00000427534 F8VRH5 84 aa10.1□□□□□ -0.79
SPG11-202ENST00000427534 MSMPQ1L6U9 139 aa10.1□□□□□ -0.79
SPG11-202ENST00000427534 C16orf54Q6UWD8 224 aa10.1□□□□□ -0.79
SPG11-202ENST00000427534 SPRY4Q9C004 299 aa10.1□□□□□ -0.79
SPG11-202ENST00000427534 NUP210Q8TEM1 1887 aaPredicted RBP10.1□□□□□ -0.79
SPG11-202ENST00000427534 IGLV11-55A0A075B6I3 123 aa10.1□□□□□ -0.79
SPG11-202ENST00000427534 SND1-IT1Q9HBX3 110 aa10.09□□□□□ -0.79
SPG11-202ENST00000427534 ORMDL1Q9P0S3 153 aa10.09□□□□□ -0.79
SPG11-202ENST00000427534 CCL25O15444 150 aa10.09□□□□□ -0.79
SPG11-202ENST00000427534 LGALS9BQ3B8N2 356 aa10.09□□□□□ -0.79
SPG11-202ENST00000427534 LGALS9CQ6DKI2 356 aa10.09□□□□□ -0.79
SPG11-202ENST00000427534 TTTY13Q9BZ97 58 aa10.09□□□□□ -0.79
SPG11-202ENST00000427534 HIGD2AQ9BW72 106 aa10.09□□□□□ -0.79
SPG11-202ENST00000427534 CACNA1HO95180 2353 aa10.08□□□□□ -0.8
SPG11-202ENST00000427534 C18orf65Q6ZTR6 163 aa10.08□□□□□ -0.8
SPG11-202ENST00000427534 MUSTN1Q8IVN3 82 aa10.08□□□□□ -0.8
SPG11-202ENST00000427534 NTN5Q8WTR8 489 aaPredicted RBP10.08□□□□□ -0.8
SPG11-202ENST00000427534 LINC00269Q8N2A0 174 aa10.08□□□□□ -0.8
SPG11-202ENST00000427534 WFDC10AQ9H1F0 79 aa10.08□□□□□ -0.8
SPG11-202ENST00000427534 MAP6D1Q9H9H5 199 aa10.08□□□□□ -0.8
SPG11-202ENST00000427534 MYCNOSP40205 109 aa10.07□□□□□ -0.8
SPG11-202ENST00000427534 BVES-AS1Q5T3Y7 98 aa10.07□□□□□ -0.8
SPG11-202ENST00000427534 C22orf34Q6ZV56 151 aa10.07□□□□□ -0.8
SPG11-202ENST00000427534 WFDC9Q8NEX5 89 aa10.07□□□□□ -0.8
SPG11-202ENST00000427534 SPAG11BQ08648 103 aa10.07□□□□□ -0.8
SPG11-202ENST00000427534 A0A087WZ39 114 aa10.07□□□□□ -0.8
SPG11-202ENST00000427534 MALRD1Q5VYJ5 2156 aa10.07□□□□□ -0.8
SPG11-202ENST00000427534 PATE2Q6UY27 113 aa10.07□□□□□ -0.8
SPG11-202ENST00000427534 C20orf78Q9BR46 151 aa10.07□□□□□ -0.8
SPG11-202ENST00000427534 TRBV7-3A0A075B6L6 115 aa10.07□□□□□ -0.8
SPG11-202ENST00000427534 TNCP24821 2201 aa10.07□□□□□ -0.8
SPG11-202ENST00000427534 SHANK1Q9Y566 2161 aa10.07□□□□□ -0.8
SPG11-202ENST00000427534 NDUFA1O15239 70 aa10.07□□□□□ -0.8
SPG11-202ENST00000427534 PRM2P04554 102 aa10.07□□□□□ -0.8
SPG11-202ENST00000427534 CRYGDP07320 174 aa10.06□□□□□ -0.8
SPG11-202ENST00000427534 COX8AP10176 69 aa10.06□□□□□ -0.8
SPG11-202ENST00000427534 Q6ZTI0 123 aa10.06□□□□□ -0.8
SPG11-202ENST00000427534 C9orf118A6NHY6 69 aa10.06□□□□□ -0.8
SPG11-202ENST00000427534 DAZ2Q13117 558 aaKnown RBP10.06□□□□□ -0.8
SPG11-202ENST00000427534 DAZ4Q86SG3 579 aaKnown RBP10.06□□□□□ -0.8
SPG11-202ENST00000427534 DAZ3Q9NR90 486 aaKnown RBP10.06□□□□□ -0.8
SPG11-202ENST00000427534 DEFB131BA0A096LNP1 70 aa10.06□□□□□ -0.8
SPG11-202ENST00000427534 FAM222AQ5U5X8 452 aa10.06□□□□□ -0.8
SPG11-202ENST00000427534 FAM19A5Q7Z5A7 132 aaPredicted RBP10.06□□□□□ -0.8
SPG11-202ENST00000427534 LINC00526Q96FQ7 95 aa10.05□□□□□ -0.8
SPG11-202ENST00000427534 CLEC2BQ92478 149 aa10.05□□□□□ -0.8
SPG11-202ENST00000427534 C12orf74Q32Q52 190 aa10.05□□□□□ -0.8
SPG11-202ENST00000427534 TEX22C9J3V5 150 aa10.05□□□□□ -0.8
SPG11-202ENST00000427534 A0A0J9YWU9 116 aa10.05□□□□□ -0.8
SPG11-202ENST00000427534 DSCAML1Q8TD84 2053 aa10.04□□□□□ -0.8
SPG11-202ENST00000427534 PTPRQQ9UMZ3 2332 aa10.04□□□□□ -0.8
SPG11-202ENST00000427534 TRBV20-1A0A075B6N2 111 aa10.04□□□□□ -0.8
SPG11-202ENST00000427534 CDPF1Q6NVV7 123 aa10.04□□□□□ -0.8
SPG11-202ENST00000427534 ZNF493Q6ZR52 646 aa10.04□□□□□ -0.8
SPG11-202ENST00000427534 LENEPQ9Y5L5 61 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms