RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 LINC00614P0C842 121 aa12.64□□□□□ -0.39
FN1-208ENST00000426059 AZU1P20160 251 aa12.64□□□□□ -0.39
FN1-208ENST00000426059 NXPH4O95158 308 aa12.64□□□□□ -0.39
FN1-208ENST00000426059 PRSS3P2Q8NHM4 247 aa12.64□□□□□ -0.39
FN1-208ENST00000426059 ZNF876PQ49A33 203 aa12.63□□□□□ -0.39
FN1-208ENST00000426059 Q6ZWC4 215 aa12.63□□□□□ -0.39
FN1-208ENST00000426059 GTSCR1Q86UQ5 136 aa12.63□□□□□ -0.39
FN1-208ENST00000426059 AP1S3Q96PC3 154 aa12.63□□□□□ -0.39
FN1-208ENST00000426059 ZNF747Q9BV97 191 aa12.63□□□□□ -0.39
FN1-208ENST00000426059 DPH3P1Q9H4G8 78 aa12.63□□□□□ -0.39
FN1-208ENST00000426059 TNFRSF6BO95407 300 aa12.63□□□□□ -0.39
FN1-208ENST00000426059 FAM74A4Q5TZK3 123 aa12.63□□□□□ -0.39
FN1-208ENST00000426059 WFDC9Q8NEX5 89 aa12.62□□□□□ -0.39
FN1-208ENST00000426059 KIF25-AS1Q9Y6Z4 181 aa12.61□□□□□ -0.39
FN1-208ENST00000426059 EREGO14944 169 aa12.61□□□□□ -0.39
FN1-208ENST00000426059 PPBPP02775 128 aa12.61□□□□□ -0.39
FN1-208ENST00000426059 C12orf54Q6X4T0 127 aa12.61□□□□□ -0.39
FN1-208ENST00000426059 NBEAL2Q6ZNJ1 2754 aa12.6□□□□□ -0.39
FN1-208ENST00000426059 IGHV1-24A0A0C4DH33 117 aa12.6□□□□□ -0.39
FN1-208ENST00000426059 LINC00315P59091 139 aa12.6□□□□□ -0.39
FN1-208ENST00000426059 NRACQ8N912 160 aa12.6□□□□□ -0.39
FN1-208ENST00000426059 C11orf72Q8NBR9 251 aa12.6□□□□□ -0.39
FN1-208ENST00000426059 RPL39LQ96EH5 51 aaKnown RBP12.6□□□□□ -0.39
FN1-208ENST00000426059 C20orf144Q9BQM9 153 aa12.6□□□□□ -0.39
FN1-208ENST00000426059 SMIM17P0DL12 118 aa12.59□□□□□ -0.39
FN1-208ENST00000426059 FA2HQ7L5A8 372 aa12.59□□□□□ -0.39
FN1-208ENST00000426059 CHCHD1Q96BP2 118 aaKnown RBP12.59□□□□□ -0.39
FN1-208ENST00000426059 BTF3P20290 206 aaKnown RBP12.59□□□□□ -0.39
FN1-208ENST00000426059 OXLD1Q5BKU9 147 aa12.59□□□□□ -0.39
FN1-208ENST00000426059 SYT8Q8NBV8 401 aa12.59□□□□□ -0.39
FN1-208ENST00000426059 AP5S1Q9NUS5 200 aa12.59□□□□□ -0.39
FN1-208ENST00000426059 F5H697 171 aa12.58□□□□□ -0.4
FN1-208ENST00000426059 MCRIP2Q9BUT9 160 aaKnown RBP12.58□□□□□ -0.4
FN1-208ENST00000426059 ZNF415Q09FC8 603 aa12.58□□□□□ -0.4
FN1-208ENST00000426059 RASL10AQ92737 203 aa12.58□□□□□ -0.4
FN1-208ENST00000426059 MAP1LC3AQ9H492 121 aa12.58□□□□□ -0.4
FN1-208ENST00000426059 IGHV3-73A0A0B4J1V6 119 aa12.57□□□□□ -0.4
FN1-208ENST00000426059 CRYGDP07320 174 aa12.57□□□□□ -0.4
FN1-208ENST00000426059 KRTDAPP60985 99 aa12.57□□□□□ -0.4
FN1-208ENST00000426059 LINC00173Q6ZV60 143 aa12.57□□□□□ -0.4
FN1-208ENST00000426059 CSNK1G2-AS1Q8NCQ2 148 aa12.57□□□□□ -0.4
FN1-208ENST00000426059 MRPL16Q9NX20 251 aaKnown RBP12.57□□□□□ -0.4
FN1-208ENST00000426059 MRAP2Q96G30 205 aa12.57□□□□□ -0.4
FN1-208ENST00000426059 SNHG12Q9BXW3 62 aa12.57□□□□□ -0.4
FN1-208ENST00000426059 SHISA2Q6UWI4 295 aa12.56□□□□□ -0.4
FN1-208ENST00000426059 LINC00467Q9BRT7 94 aa12.56□□□□□ -0.4
FN1-208ENST00000426059 NACAE9PAV3 2078 aa12.56□□□□□ -0.4
FN1-208ENST00000426059 SUMO4Q6EEV6 95 aa12.56□□□□□ -0.4
FN1-208ENST00000426059 DEFB104AQ8WTQ1 72 aa12.56□□□□□ -0.4
FN1-208ENST00000426059 M0R2P5 195 aa12.55□□□□□ -0.4
FN1-208ENST00000426059 SCGB1D1O95968 90 aa12.55□□□□□ -0.4
FN1-208ENST00000426059 ZNF56Q15929 161 aa12.55□□□□□ -0.4
FN1-208ENST00000426059 M0R143 59 aa12.55□□□□□ -0.4
FN1-208ENST00000426059 G0S2P27469 103 aa12.55□□□□□ -0.4
FN1-208ENST00000426059 CSTL1Q9H114 145 aa12.55□□□□□ -0.4
FN1-208ENST00000426059 LAMTOR2Q9Y2Q5 125 aa12.55□□□□□ -0.4
FN1-208ENST00000426059 A0A096LNJ9 63 aa12.54□□□□□ -0.4
FN1-208ENST00000426059 MORN3Q6PF18 240 aaPredicted RBP12.54□□□□□ -0.4
FN1-208ENST00000426059 RNASE8Q8TDE3 154 aaKnown RBP12.54□□□□□ -0.4
FN1-208ENST00000426059 GOLT1BQ9Y3E0 138 aa12.54□□□□□ -0.4
FN1-208ENST00000426059 CMYA5Q8N3K9 4069 aa12.54□□□□□ -0.4
FN1-208ENST00000426059 C3orf79P0CE67 100 aa12.54□□□□□ -0.4
FN1-208ENST00000426059 TMEM158Q8WZ71 300 aa12.54□□□□□ -0.4
FN1-208ENST00000426059 C1QTNF4Q9BXJ3 329 aa12.54□□□□□ -0.4
FN1-208ENST00000426059 POM121L12Q8N7R1 296 aa12.53□□□□□ -0.4
FN1-208ENST00000426059 IGLV2-18A0A075B6J9 118 aa12.52□□□□□ -0.4
FN1-208ENST00000426059 NEGR1Q7Z3B1 354 aa12.52□□□□□ -0.4
FN1-208ENST00000426059 LEPROTL1O95214 131 aa12.52□□□□□ -0.41
FN1-208ENST00000426059 SUMO2P61956 95 aaKnown RBP12.51□□□□□ -0.41
FN1-208ENST00000426059 TMEM263Q8WUH6 116 aaKnown RBP12.51□□□□□ -0.41
FN1-208ENST00000426059 TRGV1A0A0A0MS02 117 aa12.51□□□□□ -0.41
FN1-208ENST00000426059 WIPF1O43516 503 aa12.51□□□□□ -0.41
FN1-208ENST00000426059 ZNF705AQ6ZN79 300 aaPredicted RBP12.51□□□□□ -0.41
FN1-208ENST00000426059 Q8N8P6 123 aa12.51□□□□□ -0.41
FN1-208ENST00000426059 NXT2Q9NPJ8 142 aaKnown RBP12.51□□□□□ -0.41
FN1-208ENST00000426059 SPXQ9BT56 116 aa12.5□□□□□ -0.41
FN1-208ENST00000426059 NOP10Q9NPE3 64 aaKnown RBP12.5□□□□□ -0.41
FN1-208ENST00000426059 KIR2DL5BA0A0G2JN68 375 aa12.5□□□□□ -0.41
FN1-208ENST00000426059 KIR2DL5BA0A0G2JPC4 375 aa12.5□□□□□ -0.41
FN1-208ENST00000426059 H0Y8G0 127 aa12.5□□□□□ -0.41
FN1-208ENST00000426059 ZNF25P17030 456 aaPredicted RBP12.5□□□□□ -0.41
FN1-208ENST00000426059 KRTAP10-11P60412 298 aa12.5□□□□□ -0.41
FN1-208ENST00000426059 CFAP126Q5VTH2 177 aa12.5□□□□□ -0.41
FN1-208ENST00000426059 Q6ZTI0 123 aa12.5□□□□□ -0.41
FN1-208ENST00000426059 KIR2DL5AQ8N109 375 aa12.5□□□□□ -0.41
FN1-208ENST00000426059 PLAC8L1A1L4L8 177 aa12.49□□□□□ -0.41
FN1-208ENST00000426059 P0DMU3 169 aa12.49□□□□□ -0.41
FN1-208ENST00000426059 FAM231AP0DMU4 169 aa12.49□□□□□ -0.41
FN1-208ENST00000426059 FAM231CP0DMU5 169 aa12.49□□□□□ -0.41
FN1-208ENST00000426059 Q6ZSN1 163 aa12.49□□□□□ -0.41
FN1-208ENST00000426059 SPATA12Q7Z6I5 190 aa12.49□□□□□ -0.41
FN1-208ENST00000426059 IL17DQ8TAD2 202 aa12.49□□□□□ -0.41
FN1-208ENST00000426059 SMIM2Q9BVW6 85 aa12.49□□□□□ -0.41
FN1-208ENST00000426059 M0QY20 66 aa12.49□□□□□ -0.41
FN1-208ENST00000426059 EMP1P54849 157 aa12.49□□□□□ -0.41
FN1-208ENST00000426059 RRN3P1Q2M238 152 aa12.49□□□□□ -0.41
FN1-208ENST00000426059 Q8N976 141 aa12.49□□□□□ -0.41
FN1-208ENST00000426059 Q9UF83 564 aa12.49□□□□□ -0.41
FN1-208ENST00000426059 PRSS47A8MTI9 375 aa12.48□□□□□ -0.41
FN1-208ENST00000426059 A8MWV9 139 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 123.1 ms