RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 COX8CQ7Z4L0 72 aa11.78□□□□□ -0.52
GPC1-203ENST00000425056 SAMD10Q9BYL1 202 aa11.78□□□□□ -0.52
GPC1-203ENST00000425056 JPT2Q9H910 190 aa11.78□□□□□ -0.52
GPC1-203ENST00000425056 FLG2Q5D862 2391 aaPredicted RBP11.78□□□□□ -0.52
GPC1-203ENST00000425056 UMAD1C9J7I0 102 aa11.77□□□□□ -0.53
GPC1-203ENST00000425056 FAM229AH3BQW9 127 aa11.77□□□□□ -0.53
GPC1-203ENST00000425056 RHODO00212 210 aa11.77□□□□□ -0.53
GPC1-203ENST00000425056 FGF8P55075 233 aaPredicted RBP11.77□□□□□ -0.53
GPC1-203ENST00000425056 WFDC2Q14508 124 aa11.77□□□□□ -0.53
GPC1-203ENST00000425056 AKR1C8PQ5T2L2 129 aa11.77□□□□□ -0.53
GPC1-203ENST00000425056 C14orf178Q8N769 122 aaPredicted RBP11.77□□□□□ -0.53
GPC1-203ENST00000425056 ZC2HC1AQ96GY0 325 aa11.77□□□□□ -0.53
GPC1-203ENST00000425056 Q9UF83 564 aa11.77□□□□□ -0.53
GPC1-203ENST00000425056 A0A087WWC5 75 aa11.76□□□□□ -0.53
GPC1-203ENST00000425056 TRAV8-3A0A0A6YYJ7 113 aa11.76□□□□□ -0.53
GPC1-203ENST00000425056 KRBOX1C9JBD0 128 aa11.76□□□□□ -0.53
GPC1-203ENST00000425056 CRIP1P50238 77 aa11.76□□□□□ -0.53
GPC1-203ENST00000425056 DMRTA1Q5VZB9 504 aa11.76□□□□□ -0.53
GPC1-203ENST00000425056 SYT8Q8NBV8 401 aa11.76□□□□□ -0.53
GPC1-203ENST00000425056 ZFP30Q9Y2G7 519 aa11.76□□□□□ -0.53
GPC1-203ENST00000425056 SH2D1AO60880 128 aa11.75□□□□□ -0.53
GPC1-203ENST00000425056 ARMS2P0C7Q2 107 aa11.75□□□□□ -0.53
GPC1-203ENST00000425056 TOR2AQ5JU69 321 aa11.75□□□□□ -0.53
GPC1-203ENST00000425056 DAZ4Q86SG3 579 aaKnown RBP11.75□□□□□ -0.53
GPC1-203ENST00000425056 FMC1Q96HJ9 113 aa11.75□□□□□ -0.53
GPC1-203ENST00000425056 DAZ3Q9NR90 486 aaKnown RBP11.75□□□□□ -0.53
GPC1-203ENST00000425056 FAM30AQ9NZY2 134 aa11.75□□□□□ -0.53
GPC1-203ENST00000425056 DNAH8Q96JB1 4490 aa11.74□□□□□ -0.53
GPC1-203ENST00000425056 MAP1LC3B2A6NCE7 125 aa11.74□□□□□ -0.53
GPC1-203ENST00000425056 M0R036 132 aa11.74□□□□□ -0.53
GPC1-203ENST00000425056 RAB5CP51148 216 aa11.74□□□□□ -0.53
GPC1-203ENST00000425056 FAM162BQ5T6X4 162 aa11.74□□□□□ -0.53
GPC1-203ENST00000425056 Q6ZSA8 131 aa11.74□□□□□ -0.53
GPC1-203ENST00000425056 TCEAL7Q9BRU2 100 aa11.74□□□□□ -0.53
GPC1-203ENST00000425056 MAP1LC3BQ9GZQ8 125 aa11.74□□□□□ -0.53
GPC1-203ENST00000425056 LINC01559Q495D7 138 aa11.73□□□□□ -0.53
GPC1-203ENST00000425056 TRBV6-1A0A0K0K1D8 114 aa11.72□□□□□ -0.53
GPC1-203ENST00000425056 GRIFINA4D1Z8 144 aa11.72□□□□□ -0.53
GPC1-203ENST00000425056 FHITP49789 147 aa11.72□□□□□ -0.53
GPC1-203ENST00000425056 UBE2G1P62253 170 aa11.72□□□□□ -0.53
GPC1-203ENST00000425056 ZNF674Q2M3X9 581 aa11.72□□□□□ -0.53
GPC1-203ENST00000425056 FAM74A4Q5TZK3 123 aa11.72□□□□□ -0.53
GPC1-203ENST00000425056 SFRP2Q96HF1 295 aa11.72□□□□□ -0.53
GPC1-203ENST00000425056 COX11Q9Y6N1 276 aa11.72□□□□□ -0.53
GPC1-203ENST00000425056 LECT2O14960 151 aa11.71□□□□□ -0.53
GPC1-203ENST00000425056 LTAP01374 205 aa11.71□□□□□ -0.53
GPC1-203ENST00000425056 NIT1Q86X76 327 aa11.71□□□□□ -0.53
GPC1-203ENST00000425056 PHLDA3Q9Y5J5 127 aa11.71□□□□□ -0.53
GPC1-203ENST00000425056 A0A087WWL8 130 aa11.7□□□□□ -0.54
GPC1-203ENST00000425056 SULT1A2P50226 295 aa11.7□□□□□ -0.54
GPC1-203ENST00000425056 ZFP82Q8N141 532 aa11.7□□□□□ -0.54
GPC1-203ENST00000425056 URGCP-MRPS24S4R325 110 aa11.7□□□□□ -0.54
GPC1-203ENST00000425056 TRBV10-1A0A0K0K1A3 114 aa11.69□□□□□ -0.54
GPC1-203ENST00000425056 M0R381 172 aa11.69□□□□□ -0.54
GPC1-203ENST00000425056 ALKAL2Q6UX46 152 aa11.69□□□□□ -0.54
GPC1-203ENST00000425056 RMI2Q96E14 147 aa11.69□□□□□ -0.54
GPC1-203ENST00000425056 CHCHD7Q9BUK0 85 aa11.69□□□□□ -0.54
GPC1-203ENST00000425056 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.68□□□□□ -0.54
GPC1-203ENST00000425056 TMSB15BA0A087X1C1 80 aa11.68□□□□□ -0.54
GPC1-203ENST00000425056 AKR1C3P42330 323 aa11.68□□□□□ -0.54
GPC1-203ENST00000425056 CST9LP1Q5W188 147 aa11.68□□□□□ -0.54
GPC1-203ENST00000425056 TEX261Q6UWH6 196 aa11.68□□□□□ -0.54
GPC1-203ENST00000425056 FAM213BQ8TBF2 198 aa11.68□□□□□ -0.54
GPC1-203ENST00000425056 BAALCQ8WXS3 180 aa11.67□□□□□ -0.54
GPC1-203ENST00000425056 DNAJC30Q96LL9 226 aa11.67□□□□□ -0.54
GPC1-203ENST00000425056 TEX46H3BTG2 121 aa11.66□□□□□ -0.54
GPC1-203ENST00000425056 UBE2D3P61077 147 aa11.66□□□□□ -0.54
GPC1-203ENST00000425056 UBE2D2P62837 147 aa11.66□□□□□ -0.54
GPC1-203ENST00000425056 RPL36AP83881 106 aaKnown RBP11.66□□□□□ -0.54
GPC1-203ENST00000425056 MBD3L1Q8WWY6 194 aa11.66□□□□□ -0.54
GPC1-203ENST00000425056 RPL36ALQ969Q0 106 aaKnown RBP11.66□□□□□ -0.54
GPC1-203ENST00000425056 KLK12Q9UKR0 248 aa11.66□□□□□ -0.54
GPC1-203ENST00000425056 TRBV7-3A0A075B6L6 115 aa11.65□□□□□ -0.54
GPC1-203ENST00000425056 IGKV2D-24A0A075B6R9 120 aa11.65□□□□□ -0.54
GPC1-203ENST00000425056 A0A087WX48 190 aa11.65□□□□□ -0.54
GPC1-203ENST00000425056 PAGE4O60829 102 aa11.65□□□□□ -0.54
GPC1-203ENST00000425056 CXCL1P09341 107 aa11.65□□□□□ -0.54
GPC1-203ENST00000425056 H2AFB1P0C5Y9 115 aa11.65□□□□□ -0.54
GPC1-203ENST00000425056 BLOC1S1P78537 153 aa11.65□□□□□ -0.54
GPC1-203ENST00000425056 ATRAIDQ6UW56 229 aa11.65□□□□□ -0.54
GPC1-203ENST00000425056 OR10G8Q8NGN5 311 aa11.65□□□□□ -0.54
GPC1-203ENST00000425056 PLA2G1BP04054 148 aaKnown RBP11.64□□□□□ -0.55
GPC1-203ENST00000425056 ELOBQ15370 118 aa11.64□□□□□ -0.55
GPC1-203ENST00000425056 LINC00528Q8N1L1 170 aa11.64□□□□□ -0.55
GPC1-203ENST00000425056 Q8N976 141 aa11.64□□□□□ -0.55
GPC1-203ENST00000425056 SFT2D1Q8WV19 159 aa11.64□□□□□ -0.55
GPC1-203ENST00000425056 TRAV1-1A0A0B4J248 108 aa11.63□□□□□ -0.55
GPC1-203ENST00000425056 S100A9P06702 114 aaKnown RBP11.63□□□□□ -0.55
GPC1-203ENST00000425056 UBE2WQ96B02 151 aa11.63□□□□□ -0.55
GPC1-203ENST00000425056 SCO2A0A1W2PP80 73 aa11.62□□□□□ -0.55
GPC1-203ENST00000425056 RBFOX3A6NFN3 312 aa11.62□□□□□ -0.55
GPC1-203ENST00000425056 RAB4BP61018 213 aa11.62□□□□□ -0.55
GPC1-203ENST00000425056 RPL19P84098 196 aaKnown RBP11.62□□□□□ -0.55
GPC1-203ENST00000425056 LINC01620Q4KN68 170 aa11.62□□□□□ -0.55
GPC1-203ENST00000425056 KCNIP4Q6PIL6 250 aa11.62□□□□□ -0.55
GPC1-203ENST00000425056 SCXQ7RTU7 201 aa11.62□□□□□ -0.55
GPC1-203ENST00000425056 OR10AG1Q8NH19 301 aa11.62□□□□□ -0.55
GPC1-203ENST00000425056 MLST8Q9BVC4 326 aa11.62□□□□□ -0.55
GPC1-203ENST00000425056 TRBV6-8A0A0A6YYG3 113 aa11.61□□□□□ -0.55
GPC1-203ENST00000425056 SNAI2O43623 268 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms