RNA–Protein interactions for RNA: ENST00000424634.5

NUP50-207, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-207ENST00000424634 SYT8Q8NBV8 401 aa12.34□□□□□ -0.43
NUP50-207ENST00000424634 SFRP2Q96HF1 295 aa12.34□□□□□ -0.43
NUP50-207ENST00000424634 Q9HAA7 133 aa12.34□□□□□ -0.43
NUP50-207ENST00000424634 BOLA1Q9Y3E2 137 aa12.34□□□□□ -0.43
NUP50-207ENST00000424634 DNAH8Q96JB1 4490 aa12.33□□□□□ -0.43
NUP50-207ENST00000424634 A0A087WWL8 130 aa12.33□□□□□ -0.44
NUP50-207ENST00000424634 SCO2A0A1W2PP80 73 aa12.33□□□□□ -0.44
NUP50-207ENST00000424634 KANTRA0A1W2PQU2 76 aa12.33□□□□□ -0.44
NUP50-207ENST00000424634 PHLDA3Q9Y5J5 127 aa12.33□□□□□ -0.44
NUP50-207ENST00000424634 M0R381 172 aa12.32□□□□□ -0.44
NUP50-207ENST00000424634 PSCAO43653 123 aa12.32□□□□□ -0.44
NUP50-207ENST00000424634 TPT1P13693 172 aaKnown RBP12.32□□□□□ -0.44
NUP50-207ENST00000424634 FAM74A4Q5TZK3 123 aa12.32□□□□□ -0.44
NUP50-207ENST00000424634 MLST8Q9BVC4 326 aa12.32□□□□□ -0.44
NUP50-207ENST00000424634 RHODO00212 210 aa12.31□□□□□ -0.44
NUP50-207ENST00000424634 H2AFB1P0C5Y9 115 aa12.31□□□□□ -0.44
NUP50-207ENST00000424634 RPL19P84098 196 aaKnown RBP12.31□□□□□ -0.44
NUP50-207ENST00000424634 TMUB2Q71RG4 321 aa12.31□□□□□ -0.44
NUP50-207ENST00000424634 S100A9P06702 114 aaKnown RBP12.3□□□□□ -0.44
NUP50-207ENST00000424634 GCSHP23434 173 aa12.3□□□□□ -0.44
NUP50-207ENST00000424634 CCL20P78556 96 aa12.3□□□□□ -0.44
NUP50-207ENST00000424634 LAGE3Q14657 143 aa12.29□□□□□ -0.44
NUP50-207ENST00000424634 DAZ4Q86SG3 579 aaKnown RBP12.29□□□□□ -0.44
NUP50-207ENST00000424634 BAGE2Q86Y30 109 aa12.29□□□□□ -0.44
NUP50-207ENST00000424634 ZFP82Q8N141 532 aa12.29□□□□□ -0.44
NUP50-207ENST00000424634 DAZ3Q9NR90 486 aaKnown RBP12.29□□□□□ -0.44
NUP50-207ENST00000424634 VPS13BQ7Z7G8 4022 aa12.29□□□□□ -0.44
NUP50-207ENST00000424634 A0A087WWC5 75 aa12.27□□□□□ -0.45
NUP50-207ENST00000424634 PFDN1O60925 122 aa12.27□□□□□ -0.45
NUP50-207ENST00000424634 EIF5AP63241 154 aaKnown RBP12.27□□□□□ -0.45
NUP50-207ENST00000424634 WFDC2Q14508 124 aa12.27□□□□□ -0.45
NUP50-207ENST00000424634 Q8N814 137 aa12.27□□□□□ -0.45
NUP50-207ENST00000424634 OR10AG1Q8NH19 301 aa12.27□□□□□ -0.45
NUP50-207ENST00000424634 IGLV5-52A0A0A0MRZ9 124 aa12.26□□□□□ -0.45
NUP50-207ENST00000424634 SSBP4Q9BWG4 385 aaPredicted RBP12.26□□□□□ -0.45
NUP50-207ENST00000424634 MUC21A0A0G2JKD1 596 aa12.25□□□□□ -0.45
NUP50-207ENST00000424634 MUC21A0A140T8X8 626 aa12.25□□□□□ -0.45
NUP50-207ENST00000424634 EPM2AB3EWF7 344 aa12.25□□□□□ -0.45
NUP50-207ENST00000424634 CXCL1P09341 107 aa12.25□□□□□ -0.45
NUP50-207ENST00000424634 RPL35P42766 123 aaKnown RBP12.25□□□□□ -0.45
NUP50-207ENST00000424634 NIT1Q86X76 327 aa12.25□□□□□ -0.45
NUP50-207ENST00000424634 NTN5Q8WTR8 489 aaPredicted RBP12.25□□□□□ -0.45
NUP50-207ENST00000424634 DNAJC30Q96LL9 226 aa12.25□□□□□ -0.45
NUP50-207ENST00000424634 DERL1Q9BUN8 251 aa12.25□□□□□ -0.45
NUP50-207ENST00000424634 TRAV1-1A0A0B4J248 108 aa12.24□□□□□ -0.45
NUP50-207ENST00000424634 TRBV10-1A0A0K0K1A3 114 aa12.24□□□□□ -0.45
NUP50-207ENST00000424634 SNAI2O43623 268 aa12.24□□□□□ -0.45
NUP50-207ENST00000424634 UBE2D3P61077 147 aa12.24□□□□□ -0.45
NUP50-207ENST00000424634 UBE2D2P62837 147 aa12.24□□□□□ -0.45
NUP50-207ENST00000424634 PRR27Q6MZM9 219 aa12.24□□□□□ -0.45
NUP50-207ENST00000424634 TM2D2Q9BX73 214 aa12.24□□□□□ -0.45
NUP50-207ENST00000424634 GNG13Q9P2W3 67 aa12.24□□□□□ -0.45
NUP50-207ENST00000424634 TRAV8-3A0A0A6YYJ7 113 aa12.23□□□□□ -0.45
NUP50-207ENST00000424634 HAMPP81172 84 aa12.23□□□□□ -0.45
NUP50-207ENST00000424634 C11orf52Q96A22 123 aa12.23□□□□□ -0.45
NUP50-207ENST00000424634 TRBV7-3A0A075B6L6 115 aa12.22□□□□□ -0.45
NUP50-207ENST00000424634 OR5AL1P0C617 328 aa12.22□□□□□ -0.45
NUP50-207ENST00000424634 RAB4BP61018 213 aa12.22□□□□□ -0.45
NUP50-207ENST00000424634 RPL36AP83881 106 aaKnown RBP12.22□□□□□ -0.45
NUP50-207ENST00000424634 OR10G8Q8NGN5 311 aa12.22□□□□□ -0.45
NUP50-207ENST00000424634 RPL36ALQ969Q0 106 aaKnown RBP12.22□□□□□ -0.45
NUP50-207ENST00000424634 MANBALQ9NQG1 85 aa12.22□□□□□ -0.45
NUP50-207ENST00000424634 LECT2O14960 151 aa12.21□□□□□ -0.45
NUP50-207ENST00000424634 IGLV2-8P01709 118 aa12.21□□□□□ -0.45
NUP50-207ENST00000424634 SMR3BP02814 79 aaPredicted RBP12.21□□□□□ -0.45
NUP50-207ENST00000424634 SSTP61278 116 aa12.21□□□□□ -0.45
NUP50-207ENST00000424634 NEXN-AS1Q8NBZ9 246 aa12.21□□□□□ -0.45
NUP50-207ENST00000424634 FAM30AQ9NZY2 134 aa12.21□□□□□ -0.45
NUP50-207ENST00000424634 SRRM2Q9UQ35 2752 aaKnown RBP12.21□□□□□ -0.46
NUP50-207ENST00000424634 SULT1A2P50226 295 aa12.2□□□□□ -0.46
NUP50-207ENST00000424634 RAB5CP51148 216 aa12.2□□□□□ -0.46
NUP50-207ENST00000424634 TOR2AQ5JU69 321 aa12.2□□□□□ -0.46
NUP50-207ENST00000424634 KLK12Q9UKR0 248 aa12.2□□□□□ -0.46
NUP50-207ENST00000424634 KIF25-AS1Q9Y6Z4 181 aa12.2□□□□□ -0.46
NUP50-207ENST00000424634 RAB19A4D1S5 217 aa12.19□□□□□ -0.46
NUP50-207ENST00000424634 ZNF56Q15929 161 aa12.19□□□□□ -0.46
NUP50-207ENST00000424634 CENPWQ5EE01 88 aa12.19□□□□□ -0.46
NUP50-207ENST00000424634 Q5VSD8 79 aa12.19□□□□□ -0.46
NUP50-207ENST00000424634 SPANXN1Q5VSR9 72 aa12.19□□□□□ -0.46
NUP50-207ENST00000424634 TCTE3Q8IZS6 198 aa12.19□□□□□ -0.46
NUP50-207ENST00000424634 BAALCQ8WXS3 180 aa12.19□□□□□ -0.46
NUP50-207ENST00000424634 TMEM70Q9BUB7 260 aa12.19□□□□□ -0.46
NUP50-207ENST00000424634 URGCP-MRPS24S4R325 110 aa12.19□□□□□ -0.46
NUP50-207ENST00000424634 GZMBP10144 247 aa12.18□□□□□ -0.46
NUP50-207ENST00000424634 RBFOX3A6NFN3 312 aa12.17□□□□□ -0.46
NUP50-207ENST00000424634 EIF5AL1Q6IS14 154 aaKnown RBP12.17□□□□□ -0.46
NUP50-207ENST00000424634 HERC1Q15751 4861 aa12.16□□□□□ -0.46
NUP50-207ENST00000424634 A0A087WX48 190 aa12.16□□□□□ -0.46
NUP50-207ENST00000424634 TRBV6-8A0A0A6YYG3 113 aa12.16□□□□□ -0.46
NUP50-207ENST00000424634 C19orf71A6NCJ1 209 aa12.16□□□□□ -0.46
NUP50-207ENST00000424634 FRZBQ92765 325 aa12.16□□□□□ -0.46
NUP50-207ENST00000424634 UBE2WQ96B02 151 aa12.16□□□□□ -0.46
NUP50-207ENST00000424634 CHCHD7Q9BUK0 85 aa12.16□□□□□ -0.46
NUP50-207ENST00000424634 IGKV2D-24A0A075B6R9 120 aa12.15□□□□□ -0.46
NUP50-207ENST00000424634 F5H697 171 aa12.15□□□□□ -0.46
NUP50-207ENST00000424634 IGLC6P0CF74 106 aa12.15□□□□□ -0.46
NUP50-207ENST00000424634 INAFM2P0DMQ5 153 aa12.15□□□□□ -0.46
NUP50-207ENST00000424634 MEF2BQ02080 365 aaPredicted RBP12.15□□□□□ -0.46
NUP50-207ENST00000424634 COX11Q9Y6N1 276 aa12.15□□□□□ -0.46
NUP50-207ENST00000424634 TRBV20OR9-2A0A075B6H5 130 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms