RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 CNFNQ9BYD5 112 aa12.73□□□□□ -0.37
HDAC6-205ENST00000423941 KIF25-AS1Q9Y6Z4 181 aa12.73□□□□□ -0.37
HDAC6-205ENST00000423941 LOC100131303A0A0U1RQF7 123 aa12.72□□□□□ -0.37
HDAC6-205ENST00000423941 A0A1W2PPQ1 181 aa12.72□□□□□ -0.37
HDAC6-205ENST00000423941 CTRLP40313 264 aa12.72□□□□□ -0.37
HDAC6-205ENST00000423941 FOXA3P55318 350 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-205ENST00000423941 RHOHQ15669 191 aa12.72□□□□□ -0.37
HDAC6-205ENST00000423941 CT83Q5H943 113 aa12.72□□□□□ -0.37
HDAC6-205ENST00000423941 LYPD5Q6UWN5 251 aa12.72□□□□□ -0.37
HDAC6-205ENST00000423941 NEGR1Q7Z3B1 354 aa12.72□□□□□ -0.37
HDAC6-205ENST00000423941 UBE2DNLQ8IWF7 75 aa12.72□□□□□ -0.37
HDAC6-205ENST00000423941 OSTCQ9NRP0 149 aa12.72□□□□□ -0.37
HDAC6-205ENST00000423941 MRPS16Q9Y3D3 137 aaKnown RBP12.72□□□□□ -0.37
HDAC6-205ENST00000423941 DNAH6Q9C0G6 4158 aa12.72□□□□□ -0.37
HDAC6-205ENST00000423941 SPANXN1Q5VSR9 72 aa12.71□□□□□ -0.37
HDAC6-205ENST00000423941 Q6ZR54 194 aa12.71□□□□□ -0.37
HDAC6-205ENST00000423941 SH2D6Q7Z4S9 175 aa12.71□□□□□ -0.37
HDAC6-205ENST00000423941 PRADC1Q9BSG0 188 aa12.71□□□□□ -0.37
HDAC6-205ENST00000423941 A0A087WWL8 130 aa12.7□□□□□ -0.38
HDAC6-205ENST00000423941 MUC21A0A0G2JKD1 596 aa12.7□□□□□ -0.38
HDAC6-205ENST00000423941 MUC21A0A140T8X8 626 aa12.7□□□□□ -0.38
HDAC6-205ENST00000423941 GATCO43716 136 aaKnown RBP12.7□□□□□ -0.38
HDAC6-205ENST00000423941 LINC00694P0DN24 101 aa12.7□□□□□ -0.38
HDAC6-205ENST00000423941 TIRAPP58753 221 aa12.7□□□□□ -0.38
HDAC6-205ENST00000423941 LINC00315P59091 139 aa12.7□□□□□ -0.38
HDAC6-205ENST00000423941 RPL23P62829 140 aaKnown RBP12.7□□□□□ -0.38
HDAC6-205ENST00000423941 CACNG7P62955 275 aa12.7□□□□□ -0.38
HDAC6-205ENST00000423941 LYZL1Q6UWQ5 148 aa12.7□□□□□ -0.38
HDAC6-205ENST00000423941 GTSF1Q8WW33 167 aa12.7□□□□□ -0.38
HDAC6-205ENST00000423941 ISOC2Q96AB3 205 aa12.7□□□□□ -0.38
HDAC6-205ENST00000423941 Q9UF83 564 aa12.7□□□□□ -0.38
HDAC6-205ENST00000423941 A8MWL6 223 aa12.69□□□□□ -0.38
HDAC6-205ENST00000423941 SRIP30626 198 aa12.69□□□□□ -0.38
HDAC6-205ENST00000423941 ERVFC1-1P60608 527 aa12.69□□□□□ -0.38
HDAC6-205ENST00000423941 SOHLH1Q5JUK2 328 aa12.69□□□□□ -0.38
HDAC6-205ENST00000423941 MSRB1Q9NZV6 116 aa12.69□□□□□ -0.38
HDAC6-205ENST00000423941 NAT8Q9UHE5 227 aa12.69□□□□□ -0.38
HDAC6-205ENST00000423941 FAM74A4Q5TZK3 123 aa12.68□□□□□ -0.38
HDAC6-205ENST00000423941 C14orf178Q8N769 122 aaPredicted RBP12.68□□□□□ -0.38
HDAC6-205ENST00000423941 FAM231BA6NCW3 169 aa12.67□□□□□ -0.38
HDAC6-205ENST00000423941 NTF3P20783 257 aa12.67□□□□□ -0.38
HDAC6-205ENST00000423941 RAB4BP61018 213 aa12.67□□□□□ -0.38
HDAC6-205ENST00000423941 Q9H8V8 135 aa12.67□□□□□ -0.38
HDAC6-205ENST00000423941 V9GYV3 84 aa12.67□□□□□ -0.38
HDAC6-205ENST00000423941 AP1S3Q96PC3 154 aa12.66□□□□□ -0.38
HDAC6-205ENST00000423941 TPPP3Q9BW30 176 aa12.66□□□□□ -0.38
HDAC6-205ENST00000423941 GFRA4Q9GZZ7 299 aa12.66□□□□□ -0.38
HDAC6-205ENST00000423941 TRBV10-1A0A0K0K1A3 114 aa12.65□□□□□ -0.38
HDAC6-205ENST00000423941 TSKUQ8WUA8 353 aa12.65□□□□□ -0.38
HDAC6-205ENST00000423941 SSTP61278 116 aa12.64□□□□□ -0.39
HDAC6-205ENST00000423941 C15orf54Q8N8G6 183 aa12.64□□□□□ -0.39
HDAC6-205ENST00000423941 IGLV2-18A0A075B6J9 118 aa12.63□□□□□ -0.39
HDAC6-205ENST00000423941 NBDYA0A0U1RRE5 68 aa12.63□□□□□ -0.39
HDAC6-205ENST00000423941 EVI2AP22794 236 aa12.63□□□□□ -0.39
HDAC6-205ENST00000423941 ADIRFQ15847 76 aa12.63□□□□□ -0.39
HDAC6-205ENST00000423941 OR10G8Q8NGN5 311 aa12.63□□□□□ -0.39
HDAC6-205ENST00000423941 ATP6V0E2Q8NHE4 81 aa12.63□□□□□ -0.39
HDAC6-205ENST00000423941 TRGC1P0CF51 173 aa12.62□□□□□ -0.39
HDAC6-205ENST00000423941 UQCC3Q6UW78 93 aa12.62□□□□□ -0.39
HDAC6-205ENST00000423941 GTSF1LQ9H1H1 148 aa12.62□□□□□ -0.39
HDAC6-205ENST00000423941 GAGE12JA6NER3 117 aa12.61□□□□□ -0.39
HDAC6-205ENST00000423941 M0R2N4 97 aa12.61□□□□□ -0.39
HDAC6-205ENST00000423941 GAGE1Q13065 139 aa12.61□□□□□ -0.39
HDAC6-205ENST00000423941 GAGE4Q13068 117 aa12.61□□□□□ -0.39
HDAC6-205ENST00000423941 GAGE5Q13069 117 aa12.61□□□□□ -0.39
HDAC6-205ENST00000423941 GAGE13Q4V321 117 aa12.61□□□□□ -0.39
HDAC6-205ENST00000423941 TRBV7-3A0A075B6L6 115 aa12.6□□□□□ -0.39
HDAC6-205ENST00000423941 HIGD1CA8MV81 97 aa12.6□□□□□ -0.39
HDAC6-205ENST00000423941 SIVA1O15304 175 aa12.6□□□□□ -0.39
HDAC6-205ENST00000423941 SMIM17P0DL12 118 aa12.6□□□□□ -0.39
HDAC6-205ENST00000423941 ZNF56Q15929 161 aa12.6□□□□□ -0.39
HDAC6-205ENST00000423941 NEXN-AS1Q8NBZ9 246 aa12.6□□□□□ -0.39
HDAC6-205ENST00000423941 PGLYRP4Q96LB8 373 aa12.6□□□□□ -0.39
HDAC6-205ENST00000423941 DPH3P1Q9H4G8 78 aa12.6□□□□□ -0.39
HDAC6-205ENST00000423941 SMIM27A0A1W2PRY6 76 aa12.59□□□□□ -0.39
HDAC6-205ENST00000423941 M0QY20 66 aa12.59□□□□□ -0.39
HDAC6-205ENST00000423941 UBE2D3P61077 147 aa12.59□□□□□ -0.39
HDAC6-205ENST00000423941 UBE2D2P62837 147 aa12.59□□□□□ -0.39
HDAC6-205ENST00000423941 TWIST1Q15672 202 aa12.59□□□□□ -0.39
HDAC6-205ENST00000423941 KRTAP1-5Q9BYS1 174 aa12.59□□□□□ -0.39
HDAC6-205ENST00000423941 LINC00862A6NCI5 91 aa12.58□□□□□ -0.4
HDAC6-205ENST00000423941 DNAH10OSP0CZ25 163 aa12.58□□□□□ -0.4
HDAC6-205ENST00000423941 RPL36AP83881 106 aaKnown RBP12.58□□□□□ -0.4
HDAC6-205ENST00000423941 PNRC1Q12796 327 aaPredicted RBP12.58□□□□□ -0.4
HDAC6-205ENST00000423941 LELP1Q5T871 98 aa12.58□□□□□ -0.4
HDAC6-205ENST00000423941 RPL36ALQ969Q0 106 aaKnown RBP12.58□□□□□ -0.4
HDAC6-205ENST00000423941 A0A1B0GUT8 65 aa12.57□□□□□ -0.4
HDAC6-205ENST00000423941 F5H697 171 aa12.57□□□□□ -0.4
HDAC6-205ENST00000423941 WFDC10BQ8IUB3 73 aa12.57□□□□□ -0.4
HDAC6-205ENST00000423941 NUP35Q8NFH5 326 aa12.57□□□□□ -0.4
HDAC6-205ENST00000423941 TMEM218A2RU14 115 aa12.56□□□□□ -0.4
HDAC6-205ENST00000423941 K7EP13 123 aa12.56□□□□□ -0.4
HDAC6-205ENST00000423941 RTL8CO15255 209 aa12.56□□□□□ -0.4
HDAC6-205ENST00000423941 BTF3P20290 206 aaKnown RBP12.56□□□□□ -0.4
HDAC6-205ENST00000423941 TTC32Q5I0X7 151 aa12.56□□□□□ -0.4
HDAC6-205ENST00000423941 SUMO4Q6EEV6 95 aa12.56□□□□□ -0.4
HDAC6-205ENST00000423941 A0A087WWC5 75 aa12.55□□□□□ -0.4
HDAC6-205ENST00000423941 DNAJC30Q96LL9 226 aa12.55□□□□□ -0.4
HDAC6-205ENST00000423941 NAT8BQ9UHF3 227 aa12.55□□□□□ -0.4
HDAC6-205ENST00000423941 H7C1H1 209 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms