RNA–Protein interactions for RNA: ENST00000423048.5

ALMS1-201, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 1 (best)

Gene ALMS1, Length 5,194 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-201ENST00000423048 F6UB75 175 aa5.43□□□□□ -1.54
ALMS1-201ENST00000423048 DEFB112Q30KQ8 113 aa5.43□□□□□ -1.54
ALMS1-201ENST00000423048 HIST2H2BCQ6DN03 193 aa5.43□□□□□ -1.54
ALMS1-201ENST00000423048 HIST2H2BDQ6DRA6 164 aa5.43□□□□□ -1.54
ALMS1-201ENST00000423048 C5orf24Q7Z6I8 188 aa5.43□□□□□ -1.54
ALMS1-201ENST00000423048 IGKV1OR2-108A0A075B7D4 117 aa5.43□□□□□ -1.54
ALMS1-201ENST00000423048 TRAV13-1A0A0B4J241 112 aa5.43□□□□□ -1.54
ALMS1-201ENST00000423048 CCL18P55774 89 aa5.43□□□□□ -1.54
ALMS1-201ENST00000423048 V9GYY9 64 aa5.43□□□□□ -1.54
ALMS1-201ENST00000423048 ATG2BQ96BY7 2078 aa5.43□□□□□ -1.54
ALMS1-201ENST00000423048 KLLNB2CW77 178 aa5.43□□□□□ -1.54
ALMS1-201ENST00000423048 BRD3OSQ6XYD6 125 aa5.43□□□□□ -1.54
ALMS1-201ENST00000423048 DKK2Q9UBU2 259 aa5.43□□□□□ -1.54
ALMS1-201ENST00000423048 MIFP14174 115 aa5.42□□□□□ -1.54
ALMS1-201ENST00000423048 J3KT08 172 aa5.42□□□□□ -1.54
ALMS1-201ENST00000423048 NDUFC2O95298 119 aa5.42□□□□□ -1.54
ALMS1-201ENST00000423048 WISP1O95388 367 aa5.42□□□□□ -1.54
ALMS1-201ENST00000423048 BRWD1-AS2P59051 145 aa5.42□□□□□ -1.54
ALMS1-201ENST00000423048 ARID1BQ8NFD5 2236 aaPredicted RBP5.42□□□□□ -1.54
ALMS1-201ENST00000423048 FAM186AA6NE01 2351 aa5.42□□□□□ -1.54
ALMS1-201ENST00000423048 C9orf85Q96MD7 179 aa5.42□□□□□ -1.54
ALMS1-201ENST00000423048 ASCC3Q8N3C0 2202 aaKnown RBP5.41□□□□□ -1.54
ALMS1-201ENST00000423048 TMEM223A0PJW6 202 aa5.41□□□□□ -1.54
ALMS1-201ENST00000423048 Q9H8V8 135 aa5.41□□□□□ -1.54
ALMS1-201ENST00000423048 SND1-IT1Q9HBX3 110 aa5.41□□□□□ -1.54
ALMS1-201ENST00000423048 TP53TG3Q9ULZ0 132 aa5.41□□□□□ -1.54
ALMS1-201ENST00000423048 TNRC6BQ9UPQ9 1833 aaKnown RBP5.41□□□□□ -1.54
ALMS1-201ENST00000423048 CD24P25063 80 aa5.41□□□□□ -1.54
ALMS1-201ENST00000423048 NDUFC2-KCTD14E9PQ53 114 aa5.41□□□□□ -1.54
ALMS1-201ENST00000423048 IGLV1-40P01703 118 aa5.41□□□□□ -1.54
ALMS1-201ENST00000423048 ETDBQ3ZM63 59 aa5.41□□□□□ -1.54
ALMS1-201ENST00000423048 ANKRD39Q53RE8 183 aa5.41□□□□□ -1.54
ALMS1-201ENST00000423048 RUSC1-AS1Q66K80 236 aa5.41□□□□□ -1.54
ALMS1-201ENST00000423048 C1orf43Q9BWL3 253 aa5.41□□□□□ -1.54
ALMS1-201ENST00000423048 DIRC1Q969H9 104 aa5.41□□□□□ -1.54
ALMS1-201ENST00000423048 RNF223E7ERA6 249 aa5.4□□□□□ -1.54
ALMS1-201ENST00000423048 CABIN1Q9Y6J0 2220 aa5.4□□□□□ -1.54
ALMS1-201ENST00000423048 IGKV3OR2-268A0A0C4DH90 116 aa5.4□□□□□ -1.55
ALMS1-201ENST00000423048 LINC01548A6NM66 108 aa5.4□□□□□ -1.55
ALMS1-201ENST00000423048 PROP1O75360 226 aa5.4□□□□□ -1.55
ALMS1-201ENST00000423048 NDUFB1O75438 58 aa5.4□□□□□ -1.55
ALMS1-201ENST00000423048 UQCRQO14949 82 aa5.4□□□□□ -1.55
ALMS1-201ENST00000423048 CDPF1Q6NVV7 123 aa5.4□□□□□ -1.55
ALMS1-201ENST00000423048 IGHV4-61A0A0C4DH41 118 aa5.39□□□□□ -1.55
ALMS1-201ENST00000423048 NTN5Q8WTR8 489 aaPredicted RBP5.39□□□□□ -1.55
ALMS1-201ENST00000423048 ABCA7Q8IZY2 2146 aa5.39□□□□□ -1.55
ALMS1-201ENST00000423048 WISP2O76076 250 aa5.39□□□□□ -1.55
ALMS1-201ENST00000423048 MP68P56378 58 aa5.39□□□□□ -1.55
ALMS1-201ENST00000423048 CFHR3Q02985 330 aa5.39□□□□□ -1.55
ALMS1-201ENST00000423048 LY6DQ14210 128 aa5.39□□□□□ -1.55
ALMS1-201ENST00000423048 CITED2Q99967 270 aaPredicted RBP5.39□□□□□ -1.55
ALMS1-201ENST00000423048 LINC00205P59089 165 aa5.39□□□□□ -1.55
ALMS1-201ENST00000423048 MUSTN1Q8IVN3 82 aa5.39□□□□□ -1.55
ALMS1-201ENST00000423048 HIST1H4AP62805 103 aaKnown RBP5.39□□□□□ -1.55
ALMS1-201ENST00000423048 APRG1Q8IVJ8 170 aa5.39□□□□□ -1.55
ALMS1-201ENST00000423048 XCL2Q9UBD3 114 aa5.39□□□□□ -1.55
ALMS1-201ENST00000423048 RIF1Q5UIP0 2472 aaKnown RBP5.38□□□□□ -1.55
ALMS1-201ENST00000423048 F5H768 121 aa5.38□□□□□ -1.55
ALMS1-201ENST00000423048 PSCAO43653 123 aa5.38□□□□□ -1.55
ALMS1-201ENST00000423048 IGLV2-11P01706 119 aa5.38□□□□□ -1.55
ALMS1-201ENST00000423048 RNASE1P07998 156 aaKnown RBP5.38□□□□□ -1.55
ALMS1-201ENST00000423048 C3orf56Q8N813 242 aa5.38□□□□□ -1.55
ALMS1-201ENST00000423048 KLK5Q9Y337 293 aaPredicted RBP5.38□□□□□ -1.55
ALMS1-201ENST00000423048 ATRXP46100 2492 aa5.38□□□□□ -1.55
ALMS1-201ENST00000423048 B5MCH6 92 aa5.38□□□□□ -1.55
ALMS1-201ENST00000423048 POLR2KP53803 58 aaKnown RBP5.38□□□□□ -1.55
ALMS1-201ENST00000423048 DIAPH2-AS1Q14236 149 aa5.38□□□□□ -1.55
ALMS1-201ENST00000423048 C16orf95Q9H693 158 aa5.38□□□□□ -1.55
ALMS1-201ENST00000423048 MAP6D1Q9H9H5 199 aa5.38□□□□□ -1.55
ALMS1-201ENST00000423048 ZFAND2AQ8N6M9 145 aa5.38□□□□□ -1.55
ALMS1-201ENST00000423048 IGKV3D-20A0A0C4DH25 116 aa5.38□□□□□ -1.55
ALMS1-201ENST00000423048 UBE2BP63146 152 aa5.38□□□□□ -1.55
ALMS1-201ENST00000423048 IGHV3-30-3P0DP02 117 aa5.37□□□□□ -1.55
ALMS1-201ENST00000423048 RPL35AP18077 110 aaKnown RBP5.37□□□□□ -1.55
ALMS1-201ENST00000423048 Q6ZPA2 131 aa5.37□□□□□ -1.55
ALMS1-201ENST00000423048 RNF185Q96GF1 192 aa5.37□□□□□ -1.55
ALMS1-201ENST00000423048 CACNA1EQ15878 2313 aa5.37□□□□□ -1.55
ALMS1-201ENST00000423048 IGHV3OR16-8A0A075B7F1 116 aa5.37□□□□□ -1.55
ALMS1-201ENST00000423048 MRPS12O15235 138 aaKnown RBP5.37□□□□□ -1.55
ALMS1-201ENST00000423048 TRBV12-3P01733 135 aa5.37□□□□□ -1.55
ALMS1-201ENST00000423048 PSMB8P28062 276 aa5.37□□□□□ -1.55
ALMS1-201ENST00000423048 ETDCA0A1B0GVM5 59 aa5.37□□□□□ -1.55
ALMS1-201ENST00000423048 GNRH2O43555 120 aa5.37□□□□□ -1.55
ALMS1-201ENST00000423048 RBM3P98179 157 aaKnown RBP5.37□□□□□ -1.55
ALMS1-201ENST00000423048 DHRS4-AS1Q9P1J3 65 aa5.37□□□□□ -1.55
ALMS1-201ENST00000423048 FER1L5A0AVI2 2057 aa5.37□□□□□ -1.55
ALMS1-201ENST00000423048 KNCNA6PVL3 124 aa5.36□□□□□ -1.55
ALMS1-201ENST00000423048 M0QY20 66 aa5.36□□□□□ -1.55
ALMS1-201ENST00000423048 IGHV4-59P01825 116 aa5.36□□□□□ -1.55
ALMS1-201ENST00000423048 PCP2Q8IVA1 136 aa5.36□□□□□ -1.55
ALMS1-201ENST00000423048 C17orf77Q96MU5 243 aa5.36□□□□□ -1.55
ALMS1-201ENST00000423048 HHLA3Q9XRX5 114 aa5.36□□□□□ -1.55
ALMS1-201ENST00000423048 ZNF706Q9Y5V0 76 aaPredicted RBP5.36□□□□□ -1.55
ALMS1-201ENST00000423048 ATG2AQ2TAZ0 1938 aa5.36□□□□□ -1.55
ALMS1-201ENST00000423048 MPDZO75970 2070 aa5.36□□□□□ -1.55
ALMS1-201ENST00000423048 A0A0J9YY99 117 aa5.36□□□□□ -1.55
ALMS1-201ENST00000423048 A0A1W2PNU3 283 aaPredicted RBP5.36□□□□□ -1.55
ALMS1-201ENST00000423048 DEFB114Q30KQ6 69 aa5.36□□□□□ -1.55
ALMS1-201ENST00000423048 PRR30Q53SZ7 412 aaPredicted RBP5.36□□□□□ -1.55
ALMS1-201ENST00000423048 KNTC1P50748 2209 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms