RNA–Protein interactions for RNA: ENST00000422760.1

LSM8-203, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 1 (best) BASIC

Gene LSM8, Length 1,920 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-203ENST00000422760 H7C1H1 209 aa17.22■□□□□ 0.35
LSM8-203ENST00000422760 J3KRW8 73 aa17.22■□□□□ 0.35
LSM8-203ENST00000422760 SCGB2A2Q13296 93 aa17.22■□□□□ 0.35
LSM8-203ENST00000422760 HIST2H2BDQ6DRA6 164 aa17.22■□□□□ 0.35
LSM8-203ENST00000422760 KLHL30-AS1Q8NEE0 82 aa17.22■□□□□ 0.35
LSM8-203ENST00000422760 ZC2HC1BQ5TFG8 222 aa17.21■□□□□ 0.35
LSM8-203ENST00000422760 DUX3Q96PT4 197 aa17.21■□□□□ 0.35
LSM8-203ENST00000422760 SMR3AQ99954 134 aa17.21■□□□□ 0.35
LSM8-203ENST00000422760 TRAV8-6A0A0B4J262 113 aa17.21■□□□□ 0.35
LSM8-203ENST00000422760 TRAV26-2A0A0B4J265 109 aa17.21■□□□□ 0.35
LSM8-203ENST00000422760 RNASE1P07998 156 aaKnown RBP17.21■□□□□ 0.35
LSM8-203ENST00000422760 RNASE4P34096 147 aaKnown RBP17.21■□□□□ 0.35
LSM8-203ENST00000422760 NOTCH2Q04721 2471 aa17.2■□□□□ 0.34
LSM8-203ENST00000422760 F8VRH5 84 aa17.2■□□□□ 0.34
LSM8-203ENST00000422760 ZNF688P0C7X2 276 aa17.2■□□□□ 0.34
LSM8-203ENST00000422760 RASL10AQ92737 203 aa17.2■□□□□ 0.34
LSM8-203ENST00000422760 TMEM160Q9NX00 188 aa17.2■□□□□ 0.34
LSM8-203ENST00000422760 GAGE10A6NGK3 116 aa17.19■□□□□ 0.34
LSM8-203ENST00000422760 K7EQG2 157 aa17.19■□□□□ 0.34
LSM8-203ENST00000422760 MRPL35Q9NZE8 188 aaKnown RBP17.19■□□□□ 0.34
LSM8-203ENST00000422760 CDKN1BP46527 198 aa17.18■□□□□ 0.34
LSM8-203ENST00000422760 RNASE3P12724 160 aaKnown RBP17.17■□□□□ 0.34
LSM8-203ENST00000422760 SNRPD3P62318 126 aaKnown RBP17.17■□□□□ 0.34
LSM8-203ENST00000422760 CHAC1Q9BUX1 264 aa17.17■□□□□ 0.34
LSM8-203ENST00000422760 HIVEP2P31629 2446 aa17.17■□□□□ 0.34
LSM8-203ENST00000422760 SMIM13P0DJ93 91 aa17.17■□□□□ 0.34
LSM8-203ENST00000422760 FAM159AQ6UWV7 190 aa17.17■□□□□ 0.34
LSM8-203ENST00000422760 SCGB3A1Q96QR1 104 aa17.17■□□□□ 0.34
LSM8-203ENST00000422760 TM2D2Q9BX73 214 aa17.17■□□□□ 0.34
LSM8-203ENST00000422760 IGKV2D-26A0A0A0MRZ7 120 aa17.16■□□□□ 0.34
LSM8-203ENST00000422760 UFSP1Q6NVU6 142 aa17.16■□□□□ 0.34
LSM8-203ENST00000422760 C14orf178Q8N769 122 aaPredicted RBP17.16■□□□□ 0.34
LSM8-203ENST00000422760 OR5A1Q8NGJ0 315 aa17.16■□□□□ 0.34
LSM8-203ENST00000422760 RNASE8Q8TDE3 154 aaKnown RBP17.16■□□□□ 0.34
LSM8-203ENST00000422760 OTOGQ6ZRI0 2925 aa17.16■□□□□ 0.34
LSM8-203ENST00000422760 TRBV25-1A0A075B6N4 114 aa17.15■□□□□ 0.34
LSM8-203ENST00000422760 C11orf44Q8N8P7 122 aa17.15■□□□□ 0.34
LSM8-203ENST00000422760 ZNF418Q8TF45 676 aaPredicted RBP17.15■□□□□ 0.34
LSM8-203ENST00000422760 PEMTQ9UBM1 199 aa17.15■□□□□ 0.34
LSM8-203ENST00000422760 HILS1P60008 231 aa17.15■□□□□ 0.34
LSM8-203ENST00000422760 GTSCR1Q86UQ5 136 aa17.15■□□□□ 0.34
LSM8-203ENST00000422760 DLX4Q92988 240 aaPredicted RBP17.15■□□□□ 0.34
LSM8-203ENST00000422760 CST9LQ9H4G1 147 aa17.15■□□□□ 0.34
LSM8-203ENST00000422760 K7EP34 96 aa17.14■□□□□ 0.33
LSM8-203ENST00000422760 RBX1P62877 108 aa17.14■□□□□ 0.33
LSM8-203ENST00000422760 GAGE12BA1L429 117 aa17.13■□□□□ 0.33
LSM8-203ENST00000422760 ERASQ7Z444 233 aa17.13■□□□□ 0.33
LSM8-203ENST00000422760 NEXN-AS1Q8NBZ9 246 aa17.13■□□□□ 0.33
LSM8-203ENST00000422760 LINC01006Q8NI28 216 aa17.13■□□□□ 0.33
LSM8-203ENST00000422760 WFDC12Q8WWY7 111 aa17.13■□□□□ 0.33
LSM8-203ENST00000422760 C16orf95Q9H693 158 aa17.13■□□□□ 0.33
LSM8-203ENST00000422760 CHTOPQ9Y3Y2 248 aaKnown RBP17.13■□□□□ 0.33
LSM8-203ENST00000422760 CD28P10747 220 aa17.13■□□□□ 0.33
LSM8-203ENST00000422760 SETD2Q9BYW2 2564 aaPredicted RBP17.12■□□□□ 0.33
LSM8-203ENST00000422760 A0A0J9YX75 114 aa17.12■□□□□ 0.33
LSM8-203ENST00000422760 MGPP08493 103 aa17.12■□□□□ 0.33
LSM8-203ENST00000422760 PAPPA-AS1Q5QFB9 102 aa17.12■□□□□ 0.33
LSM8-203ENST00000422760 KIF25-AS1Q9Y6Z4 181 aa17.12■□□□□ 0.33
LSM8-203ENST00000422760 A0A1W2PPM0 123 aa17.11■□□□□ 0.33
LSM8-203ENST00000422760 LY6G6DO95868 133 aa17.11■□□□□ 0.33
LSM8-203ENST00000422760 C2orf66Q6UXQ4 117 aa17.11■□□□□ 0.33
LSM8-203ENST00000422760 H3BUT2 72 aa17.11■□□□□ 0.33
LSM8-203ENST00000422760 K7ERU9 68 aa17.11■□□□□ 0.33
LSM8-203ENST00000422760 GNRH2O43555 120 aa17.11■□□□□ 0.33
LSM8-203ENST00000422760 CEND1Q8N111 149 aa17.11■□□□□ 0.33
LSM8-203ENST00000422760 RAX2Q96IS3 184 aa17.11■□□□□ 0.33
LSM8-203ENST00000422760 SORL1Q92673 2214 aa17.1■□□□□ 0.33
LSM8-203ENST00000422760 A0A1W2PRX2 142 aa17.1■□□□□ 0.33
LSM8-203ENST00000422760 FABP2P12104 132 aa17.1■□□□□ 0.33
LSM8-203ENST00000422760 GCSHP23434 173 aa17.1■□□□□ 0.33
LSM8-203ENST00000422760 OCIAD2Q56VL3 154 aa17.1■□□□□ 0.33
LSM8-203ENST00000422760 CYSLTR1Q9Y271 337 aa17.09■□□□□ 0.33
LSM8-203ENST00000422760 AGRNO00468 2067 aa17.09■□□□□ 0.33
LSM8-203ENST00000422760 OR11H12B2RN74 326 aa17.09■□□□□ 0.33
LSM8-203ENST00000422760 DUSP14O95147 198 aaKnown RBP17.09■□□□□ 0.33
LSM8-203ENST00000422760 TCTAP57738 103 aa17.09■□□□□ 0.33
LSM8-203ENST00000422760 FHL3Q13643 280 aa17.09■□□□□ 0.33
LSM8-203ENST00000422760 SYT8Q8NBV8 401 aa17.09■□□□□ 0.33
LSM8-203ENST00000422760 OR11H2Q8NH07 326 aa17.09■□□□□ 0.33
LSM8-203ENST00000422760 RPL39LQ96EH5 51 aaKnown RBP17.09■□□□□ 0.33
LSM8-203ENST00000422760 TRBV6-5A0A0K0K1A5 114 aa17.08■□□□□ 0.33
LSM8-203ENST00000422760 VCYO14598 125 aa17.08■□□□□ 0.33
LSM8-203ENST00000422760 LINC00315P59091 139 aa17.08■□□□□ 0.33
LSM8-203ENST00000422760 TMEM61Q8N0U2 210 aa17.08■□□□□ 0.33
LSM8-203ENST00000422760 CITED2Q99967 270 aaPredicted RBP17.08■□□□□ 0.33
LSM8-203ENST00000422760 CSTL1Q9H114 145 aa17.08■□□□□ 0.33
LSM8-203ENST00000422760 TMEM141Q96I45 108 aa17.08■□□□□ 0.32
LSM8-203ENST00000422760 IGKV3-20P01619 116 aa17.07■□□□□ 0.32
LSM8-203ENST00000422760 DYNLRB2Q8TF09 96 aa17.07■□□□□ 0.32
LSM8-203ENST00000422760 BAALCQ8WXS3 180 aa17.07■□□□□ 0.32
LSM8-203ENST00000422760 POLR2KP53803 58 aaKnown RBP17.06■□□□□ 0.32
LSM8-203ENST00000422760 FOXI2Q6ZQN5 318 aa17.06■□□□□ 0.32
LSM8-203ENST00000422760 C9orf85Q96MD7 179 aa17.06■□□□□ 0.32
LSM8-203ENST00000422760 JMJD8Q96S16 334 aa17.06■□□□□ 0.32
LSM8-203ENST00000422760 E9PLD3 99 aa17.06■□□□□ 0.32
LSM8-203ENST00000422760 SAMD5Q5TGI4 173 aa17.06■□□□□ 0.32
LSM8-203ENST00000422760 KIR2DL4Q99706 377 aa17.06■□□□□ 0.32
LSM8-203ENST00000422760 TSSC4Q9Y5U2 329 aaPredicted RBP17.06■□□□□ 0.32
LSM8-203ENST00000422760 WNK1Q9H4A3 2382 aa17.05■□□□□ 0.32
LSM8-203ENST00000422760 CCL24O00175 119 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms