RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 ZFP82Q8N141 532 aa14.29□□□□□ -0.12
PTPN4-202ENST00000420482 SFT2D1Q8WV19 159 aa14.29□□□□□ -0.12
PTPN4-202ENST00000420482 FRZBQ92765 325 aa14.29□□□□□ -0.12
PTPN4-202ENST00000420482 A0A0D9SG52 128 aa14.28□□□□□ -0.12
PTPN4-202ENST00000420482 KANTRA0A1W2PQU2 76 aa14.28□□□□□ -0.12
PTPN4-202ENST00000420482 LRCOL1A6NCL2 159 aa14.28□□□□□ -0.12
PTPN4-202ENST00000420482 PAGE4O60829 102 aa14.28□□□□□ -0.12
PTPN4-202ENST00000420482 LINC00694P0DN24 101 aa14.28□□□□□ -0.12
PTPN4-202ENST00000420482 UFSP1Q6NVU6 142 aa14.28□□□□□ -0.12
PTPN4-202ENST00000420482 FAM213BQ8TBF2 198 aa14.28□□□□□ -0.12
PTPN4-202ENST00000420482 SFRP2Q96HF1 295 aa14.28□□□□□ -0.12
PTPN4-202ENST00000420482 SAMD10Q9BYL1 202 aa14.28□□□□□ -0.12
PTPN4-202ENST00000420482 JPT2Q9H910 190 aa14.28□□□□□ -0.12
PTPN4-202ENST00000420482 TMSB15BA0A087X1C1 80 aa14.27□□□□□ -0.13
PTPN4-202ENST00000420482 HMSDA8MTL9 139 aa14.27□□□□□ -0.13
PTPN4-202ENST00000420482 M0R381 172 aa14.27□□□□□ -0.13
PTPN4-202ENST00000420482 XGP55808 180 aa14.27□□□□□ -0.13
PTPN4-202ENST00000420482 Q8N814 137 aa14.27□□□□□ -0.13
PTPN4-202ENST00000420482 COX11Q9Y6N1 276 aa14.27□□□□□ -0.13
PTPN4-202ENST00000420482 SMLR1H3BR10 107 aa14.26□□□□□ -0.13
PTPN4-202ENST00000420482 C14orf178Q8N769 122 aaPredicted RBP14.26□□□□□ -0.13
PTPN4-202ENST00000420482 MBD3L1Q8WWY6 194 aa14.26□□□□□ -0.13
PTPN4-202ENST00000420482 ZNF471Q9BX82 626 aaPredicted RBP14.26□□□□□ -0.13
PTPN4-202ENST00000420482 HERC1Q15751 4861 aa14.25□□□□□ -0.13
PTPN4-202ENST00000420482 KCNIP4Q6PIL6 250 aa14.25□□□□□ -0.13
PTPN4-202ENST00000420482 RMI2Q96E14 147 aa14.25□□□□□ -0.13
PTPN4-202ENST00000420482 A0A087WWL8 130 aa14.24□□□□□ -0.13
PTPN4-202ENST00000420482 TRBV10-1A0A0K0K1A3 114 aa14.24□□□□□ -0.13
PTPN4-202ENST00000420482 BCL2L11O43521 198 aa14.24□□□□□ -0.13
PTPN4-202ENST00000420482 RPL36AP83881 106 aaKnown RBP14.24□□□□□ -0.13
PTPN4-202ENST00000420482 RPL36ALQ969Q0 106 aaKnown RBP14.24□□□□□ -0.13
PTPN4-202ENST00000420482 TMEM70Q9BUB7 260 aa14.24□□□□□ -0.13
PTPN4-202ENST00000420482 DMBT1Q9UGM3 2413 aaPredicted RBP14.24□□□□□ -0.13
PTPN4-202ENST00000420482 H2AFB1P0C5Y9 115 aa14.23□□□□□ -0.13
PTPN4-202ENST00000420482 A0A1B0GV50 99 aa14.22□□□□□ -0.13
PTPN4-202ENST00000420482 CXCL1P09341 107 aa14.22□□□□□ -0.13
PTPN4-202ENST00000420482 ELOBQ15370 118 aa14.22□□□□□ -0.13
PTPN4-202ENST00000420482 Q5VSD8 79 aa14.22□□□□□ -0.13
PTPN4-202ENST00000420482 DAZ4Q86SG3 579 aaKnown RBP14.22□□□□□ -0.13
PTPN4-202ENST00000420482 BAGE2Q86Y30 109 aa14.22□□□□□ -0.13
PTPN4-202ENST00000420482 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.22□□□□□ -0.13
PTPN4-202ENST00000420482 DAZ3Q9NR90 486 aaKnown RBP14.22□□□□□ -0.13
PTPN4-202ENST00000420482 CHCHD7Q9BUK0 85 aa14.21□□□□□ -0.13
PTPN4-202ENST00000420482 A0A087WX48 190 aa14.2□□□□□ -0.14
PTPN4-202ENST00000420482 SCO2A0A1W2PP80 73 aa14.2□□□□□ -0.14
PTPN4-202ENST00000420482 FAM229AH3BQW9 127 aa14.2□□□□□ -0.14
PTPN4-202ENST00000420482 Q9UF83 564 aa14.2□□□□□ -0.14
PTPN4-202ENST00000420482 TRBV7-3A0A075B6L6 115 aa14.19□□□□□ -0.14
PTPN4-202ENST00000420482 INAFM2P0DMQ5 153 aa14.19□□□□□ -0.14
PTPN4-202ENST00000420482 NIT1Q86X76 327 aa14.19□□□□□ -0.14
PTPN4-202ENST00000420482 Q8N3U1 123 aa14.19□□□□□ -0.14
PTPN4-202ENST00000420482 TEX46H3BTG2 121 aa14.18□□□□□ -0.14
PTPN4-202ENST00000420482 C1QBP02746 253 aa14.18□□□□□ -0.14
PTPN4-202ENST00000420482 RAB4BP61018 213 aa14.18□□□□□ -0.14
PTPN4-202ENST00000420482 ZNF56Q15929 161 aa14.18□□□□□ -0.14
PTPN4-202ENST00000420482 EIF5AL1Q6IS14 154 aaKnown RBP14.18□□□□□ -0.14
PTPN4-202ENST00000420482 MANBALQ9NQG1 85 aa14.18□□□□□ -0.14
PTPN4-202ENST00000420482 FAT1Q14517 4588 aa14.18□□□□□ -0.14
PTPN4-202ENST00000420482 SPANXN1Q5VSR9 72 aa14.17□□□□□ -0.14
PTPN4-202ENST00000420482 PRR27Q6MZM9 219 aa14.17□□□□□ -0.14
PTPN4-202ENST00000420482 TMUB2Q71RG4 321 aa14.17□□□□□ -0.14
PTPN4-202ENST00000420482 MLST8Q9BVC4 326 aa14.17□□□□□ -0.14
PTPN4-202ENST00000420482 UBE2D3P61077 147 aa14.16□□□□□ -0.14
PTPN4-202ENST00000420482 UBE2D2P62837 147 aa14.16□□□□□ -0.14
PTPN4-202ENST00000420482 VPS13BQ7Z7G8 4022 aa14.16□□□□□ -0.14
PTPN4-202ENST00000420482 SMR3BP02814 79 aaPredicted RBP14.15□□□□□ -0.14
PTPN4-202ENST00000420482 OR5AL1P0C617 328 aa14.15□□□□□ -0.14
PTPN4-202ENST00000420482 SMIM17P0DL12 118 aa14.15□□□□□ -0.14
PTPN4-202ENST00000420482 RAB5CP51148 216 aa14.15□□□□□ -0.14
PTPN4-202ENST00000420482 RPL19P84098 196 aaKnown RBP14.15□□□□□ -0.14
PTPN4-202ENST00000420482 OR10G8Q8NGN5 311 aa14.15□□□□□ -0.14
PTPN4-202ENST00000420482 OR10AG1Q8NH19 301 aa14.15□□□□□ -0.14
PTPN4-202ENST00000420482 KLK12Q9UKR0 248 aa14.15□□□□□ -0.14
PTPN4-202ENST00000420482 IGKV2D-24A0A075B6R9 120 aa14.14□□□□□ -0.15
PTPN4-202ENST00000420482 SNAI2O43623 268 aa14.14□□□□□ -0.15
PTPN4-202ENST00000420482 PKIAP61925 76 aa14.14□□□□□ -0.15
PTPN4-202ENST00000420482 Q0VG73 95 aa14.14□□□□□ -0.15
PTPN4-202ENST00000420482 SSBP4Q9BWG4 385 aaPredicted RBP14.14□□□□□ -0.15
PTPN4-202ENST00000420482 TMEM262E9PQX1 116 aa14.13□□□□□ -0.15
PTPN4-202ENST00000420482 F5H697 171 aa14.13□□□□□ -0.15
PTPN4-202ENST00000420482 RPL35P42766 123 aaKnown RBP14.13□□□□□ -0.15
PTPN4-202ENST00000420482 Q8N976 141 aa14.13□□□□□ -0.15
PTPN4-202ENST00000420482 UBE2WQ96B02 151 aa14.13□□□□□ -0.15
PTPN4-202ENST00000420482 GNG13Q9P2W3 67 aa14.13□□□□□ -0.15
PTPN4-202ENST00000420482 LECT2O14960 151 aa14.12□□□□□ -0.15
PTPN4-202ENST00000420482 TMEM97Q5BJF2 176 aa14.12□□□□□ -0.15
PTPN4-202ENST00000420482 DAZAP1Q96EP5 407 aaKnown RBP14.12□□□□□ -0.15
PTPN4-202ENST00000420482 TRBV6-8A0A0A6YYG3 113 aa14.11□□□□□ -0.15
PTPN4-202ENST00000420482 BAALCQ8WXS3 180 aa14.11□□□□□ -0.15
PTPN4-202ENST00000420482 AP1S3Q96PC3 154 aa14.11□□□□□ -0.15
PTPN4-202ENST00000420482 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.1□□□□□ -0.15
PTPN4-202ENST00000420482 TRAV1-1A0A0B4J248 108 aa14.1□□□□□ -0.15
PTPN4-202ENST00000420482 RBFOX3A6NFN3 312 aa14.1□□□□□ -0.15
PTPN4-202ENST00000420482 CRPP02741 224 aa14.1□□□□□ -0.15
PTPN4-202ENST00000420482 WFDC2Q14508 124 aa14.1□□□□□ -0.15
PTPN4-202ENST00000420482 NEXN-AS1Q8NBZ9 246 aa14.1□□□□□ -0.15
PTPN4-202ENST00000420482 C11orf52Q96A22 123 aa14.1□□□□□ -0.15
PTPN4-202ENST00000420482 RPS20P60866 119 aaKnown RBP14.09□□□□□ -0.15
PTPN4-202ENST00000420482 SMIM12Q96EX1 92 aa14.09□□□□□ -0.15
PTPN4-202ENST00000420482 XKRY2A2RUG3 117 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms