RNA–Protein interactions for RNA: ENST00000420138.5

GPC1-202, Transcript of glypican 1, humanhuman

TSL 5 BASIC

Gene GPC1, Length 1,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-202ENST00000420138 ATOH7Q8N100 152 aa15.33■□□□□ 0.04
GPC1-202ENST00000420138 LBHQ53QV2 105 aaPredicted RBP15.32■□□□□ 0.04
GPC1-202ENST00000420138 PET117Q6UWS5 81 aa15.32■□□□□ 0.04
GPC1-202ENST00000420138 ZNF705AQ6ZN79 300 aaPredicted RBP15.32■□□□□ 0.04
GPC1-202ENST00000420138 TRAV9-2A0A087WT02 112 aa15.31■□□□□ 0.04
GPC1-202ENST00000420138 INSL3P51460 131 aa15.31■□□□□ 0.04
GPC1-202ENST00000420138 MAP1LC3AQ9H492 121 aa15.31■□□□□ 0.04
GPC1-202ENST00000420138 PRM2P04554 102 aa15.3■□□□□ 0.04
GPC1-202ENST00000420138 GIG44P09565 113 aaPredicted RBP15.29■□□□□ 0.04
GPC1-202ENST00000420138 C9orf66Q5T8R8 295 aa15.29■□□□□ 0.04
GPC1-202ENST00000420138 LINC00467Q9BRT7 94 aa15.29■□□□□ 0.04
GPC1-202ENST00000420138 XCL2Q9UBD3 114 aa15.29■□□□□ 0.04
GPC1-202ENST00000420138 KIF25-AS1Q9Y6Z4 181 aa15.29■□□□□ 0.04
GPC1-202ENST00000420138 TRGV11A0A075B6L2 103 aa15.29■□□□□ 0.04
GPC1-202ENST00000420138 A0A096LNJ9 63 aa15.29■□□□□ 0.04
GPC1-202ENST00000420138 CBY3A6NI87 242 aa15.29■□□□□ 0.04
GPC1-202ENST00000420138 TNFRSF6BO95407 300 aa15.29■□□□□ 0.04
GPC1-202ENST00000420138 INSP01308 110 aa15.29■□□□□ 0.04
GPC1-202ENST00000420138 GATA1P15976 413 aaPredicted RBP15.29■□□□□ 0.04
GPC1-202ENST00000420138 C14orf178Q8N769 122 aaPredicted RBP15.29■□□□□ 0.04
GPC1-202ENST00000420138 WFDC9Q8NEX5 89 aa15.29■□□□□ 0.04
GPC1-202ENST00000420138 MUC4Q99102 2169 aa15.28■□□□□ 0.04
GPC1-202ENST00000420138 IGLC3P0DOY3 106 aa15.28■□□□□ 0.04
GPC1-202ENST00000420138 C1orf158Q8N1D5 194 aa15.28■□□□□ 0.04
GPC1-202ENST00000420138 C2orf88Q9BSF0 95 aa15.28■□□□□ 0.04
GPC1-202ENST00000420138 UQCR10Q9UDW1 63 aa15.28■□□□□ 0.04
GPC1-202ENST00000420138 LINC01546A6NGU7 62 aa15.27■□□□□ 0.04
GPC1-202ENST00000420138 LINC00315P59091 139 aa15.27■□□□□ 0.04
GPC1-202ENST00000420138 MAJINQ3KP22 176 aa15.27■□□□□ 0.04
GPC1-202ENST00000420138 DPH3P1Q9H4G8 78 aa15.27■□□□□ 0.04
GPC1-202ENST00000420138 JPT2Q9H910 190 aa15.27■□□□□ 0.04
GPC1-202ENST00000420138 TRAV26-2A0A0B4J265 109 aa15.27■□□□□ 0.03
GPC1-202ENST00000420138 M0R143 59 aa15.27■□□□□ 0.03
GPC1-202ENST00000420138 HBDP02042 147 aa15.27■□□□□ 0.03
GPC1-202ENST00000420138 MRPL52Q86TS9 123 aaKnown RBP15.27■□□□□ 0.03
GPC1-202ENST00000420138 AP1S3Q96PC3 154 aa15.27■□□□□ 0.03
GPC1-202ENST00000420138 MCRIP2Q9BUT9 160 aaKnown RBP15.27■□□□□ 0.03
GPC1-202ENST00000420138 NXT2Q9NPJ8 142 aaKnown RBP15.27■□□□□ 0.03
GPC1-202ENST00000420138 HTN1P15515 57 aa15.26■□□□□ 0.03
GPC1-202ENST00000420138 POM121L12Q8N7R1 296 aa15.26■□□□□ 0.03
GPC1-202ENST00000420138 NRACQ8N912 160 aa15.26■□□□□ 0.03
GPC1-202ENST00000420138 NUTF2P61970 127 aaKnown RBP15.25■□□□□ 0.03
GPC1-202ENST00000420138 LINC01545Q5VT33 79 aa15.25■□□□□ 0.03
GPC1-202ENST00000420138 LINC01587Q99440 93 aa15.25■□□□□ 0.03
GPC1-202ENST00000420138 SNHG12Q9BXW3 62 aa15.25■□□□□ 0.03
GPC1-202ENST00000420138 STAB1Q9NY15 2570 aa15.25■□□□□ 0.03
GPC1-202ENST00000420138 TRRAPQ9Y4A5 3859 aa15.25■□□□□ 0.03
GPC1-202ENST00000420138 EREGO14944 169 aa15.24■□□□□ 0.03
GPC1-202ENST00000420138 IGLL1P15814 213 aa15.24■□□□□ 0.03
GPC1-202ENST00000420138 DEFB125Q8N687 156 aa15.24■□□□□ 0.03
GPC1-202ENST00000420138 C11orf72Q8NBR9 251 aa15.24■□□□□ 0.03
GPC1-202ENST00000420138 MRAP2Q96G30 205 aa15.24■□□□□ 0.03
GPC1-202ENST00000420138 PRSS47A8MTI9 375 aa15.23■□□□□ 0.03
GPC1-202ENST00000420138 H0Y8G0 127 aa15.23■□□□□ 0.03
GPC1-202ENST00000420138 RPL35AP18077 110 aaKnown RBP15.22■□□□□ 0.03
GPC1-202ENST00000420138 Q8N8P6 123 aa15.22■□□□□ 0.03
GPC1-202ENST00000420138 AZU1P20160 251 aa15.21■□□□□ 0.03
GPC1-202ENST00000420138 ZNF876PQ49A33 203 aa15.21■□□□□ 0.03
GPC1-202ENST00000420138 SYT8Q8NBV8 401 aa15.21■□□□□ 0.03
GPC1-202ENST00000420138 ST20Q9HBF5 79 aa15.21■□□□□ 0.03
GPC1-202ENST00000420138 COL6A5A8TX70 2615 aa15.21■□□□□ 0.03
GPC1-202ENST00000420138 A0A087WWL8 130 aa15.2■□□□□ 0.02
GPC1-202ENST00000420138 HSBP1L1C9JCN9 74 aa15.2■□□□□ 0.02
GPC1-202ENST00000420138 WIPF1O43516 503 aa15.2■□□□□ 0.02
GPC1-202ENST00000420138 CRYGDP07320 174 aa15.2■□□□□ 0.02
GPC1-202ENST00000420138 FCER1GP30273 86 aa15.2■□□□□ 0.02
GPC1-202ENST00000420138 Q6ZN92 141 aa15.2■□□□□ 0.02
GPC1-202ENST00000420138 LURAP1LQ8IV03 231 aa15.2■□□□□ 0.02
GPC1-202ENST00000420138 CSNK1G2-AS1Q8NCQ2 148 aa15.2■□□□□ 0.02
GPC1-202ENST00000420138 RASL10AQ92737 203 aa15.2■□□□□ 0.02
GPC1-202ENST00000420138 IGLV2-18A0A075B6J9 118 aa15.2■□□□□ 0.02
GPC1-202ENST00000420138 MGPP08493 103 aa15.19■□□□□ 0.02
GPC1-202ENST00000420138 ZNF415Q09FC8 603 aa15.19■□□□□ 0.02
GPC1-202ENST00000420138 GTSCR1Q86UQ5 136 aa15.19■□□□□ 0.02
GPC1-202ENST00000420138 hDV102S1A0JD36 115 aa15.18■□□□□ 0.02
GPC1-202ENST00000420138 HNRNPA3P51991 378 aaKnown RBP15.18■□□□□ 0.02
GPC1-202ENST00000420138 MORN3Q6PF18 240 aaPredicted RBP15.18■□□□□ 0.02
GPC1-202ENST00000420138 IFI27L1Q96BM0 104 aa15.18■□□□□ 0.02
GPC1-202ENST00000420138 IGHV3OR16-12A0A075B7B8 117 aa15.17■□□□□ 0.02
GPC1-202ENST00000420138 A0A1B0GV90 55 aa15.17■□□□□ 0.02
GPC1-202ENST00000420138 LGALS9BQ3B8N2 356 aa15.17■□□□□ 0.02
GPC1-202ENST00000420138 LGALS9CQ6DKI2 356 aa15.17■□□□□ 0.02
GPC1-202ENST00000420138 PTH2Q96A98 100 aa15.17■□□□□ 0.02
GPC1-202ENST00000420138 TMEM208Q9BTX3 173 aa15.17■□□□□ 0.02
GPC1-202ENST00000420138 NOTCH3Q9UM47 2321 aa15.17■□□□□ 0.02
GPC1-202ENST00000420138 M0R2P5 195 aa15.17■□□□□ 0.02
GPC1-202ENST00000420138 SMIM17P0DL12 118 aa15.17■□□□□ 0.02
GPC1-202ENST00000420138 IL17DQ8TAD2 202 aa15.17■□□□□ 0.02
GPC1-202ENST00000420138 RPL39LQ96EH5 51 aaKnown RBP15.17■□□□□ 0.02
GPC1-202ENST00000420138 PMCHL2Q9BQD1 86 aa15.17■□□□□ 0.02
GPC1-202ENST00000420138 RNASE8Q8TDE3 154 aaKnown RBP15.16■□□□□ 0.02
GPC1-202ENST00000420138 MDFIQ99750 246 aa15.16■□□□□ 0.02
GPC1-202ENST00000420138 PIK3CD-AS1Q5SR53 167 aa15.15■□□□□ 0.02
GPC1-202ENST00000420138 SUMO4Q6EEV6 95 aa15.15■□□□□ 0.02
GPC1-202ENST00000420138 C1QTNF4Q9BXJ3 329 aa15.15■□□□□ 0.02
GPC1-202ENST00000420138 LAGE3Q14657 143 aa15.14■□□□□ 0.01
GPC1-202ENST00000420138 FAM74A4Q5TZK3 123 aa15.14■□□□□ 0.01
GPC1-202ENST00000420138 SPXQ9BT56 116 aa15.14■□□□□ 0.01
GPC1-202ENST00000420138 MRPS16Q9Y3D3 137 aaKnown RBP15.14■□□□□ 0.01
GPC1-202ENST00000420138 GOLT1BQ9Y3E0 138 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms