RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.92□□□□□ -0.34
SYNGAP1-202ENST00000418600 IGKV2-29A2NJV5 120 aaPredicted RBP12.92□□□□□ -0.34
SYNGAP1-202ENST00000418600 K7EMI3 77 aa12.92□□□□□ -0.34
SYNGAP1-202ENST00000418600 NDUFS5O43920 106 aa12.92□□□□□ -0.34
SYNGAP1-202ENST00000418600 ZNF106Q9H2Y7 1883 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-202ENST00000418600 COX7A2LO14548 114 aa12.92□□□□□ -0.34
SYNGAP1-202ENST00000418600 NAA38Q9BRA0 125 aaKnown RBP12.92□□□□□ -0.34
SYNGAP1-202ENST00000418600 GTSF1Q8WW33 167 aa12.91□□□□□ -0.34
SYNGAP1-202ENST00000418600 CCDC140Q96MF4 163 aa12.91□□□□□ -0.34
SYNGAP1-202ENST00000418600 NBASA2RRP1 2371 aa12.91□□□□□ -0.34
SYNGAP1-202ENST00000418600 DOCK10Q96BY6 2186 aa12.91□□□□□ -0.34
SYNGAP1-202ENST00000418600 TRAV4A0A0B4J268 109 aa12.91□□□□□ -0.34
SYNGAP1-202ENST00000418600 KLK12Q9UKR0 248 aa12.91□□□□□ -0.34
SYNGAP1-202ENST00000418600 MRPL51Q4U2R6 128 aaKnown RBP12.91□□□□□ -0.34
SYNGAP1-202ENST00000418600 CUL9Q8IWT3 2517 aa12.91□□□□□ -0.34
SYNGAP1-202ENST00000418600 C16orf95Q9H693 158 aa12.91□□□□□ -0.34
SYNGAP1-202ENST00000418600 BDP1A6H8Y1 2624 aa12.9□□□□□ -0.34
SYNGAP1-202ENST00000418600 HERV-K104P63124 156 aa12.9□□□□□ -0.34
SYNGAP1-202ENST00000418600 Q8N1Y9 231 aa12.9□□□□□ -0.34
SYNGAP1-202ENST00000418600 VSIG2Q96IQ7 327 aa12.9□□□□□ -0.34
SYNGAP1-202ENST00000418600 HEATR5AQ86XA9 2040 aa12.9□□□□□ -0.34
SYNGAP1-202ENST00000418600 ETDCA0A1B0GVM5 59 aa12.9□□□□□ -0.34
SYNGAP1-202ENST00000418600 A0A0J9YX75 114 aa12.89□□□□□ -0.35
SYNGAP1-202ENST00000418600 hADV29S1A0JD25 119 aa12.89□□□□□ -0.35
SYNGAP1-202ENST00000418600 H3BQ85 93 aa12.89□□□□□ -0.35
SYNGAP1-202ENST00000418600 NHLRC4P0CG21 123 aaPredicted RBP12.89□□□□□ -0.35
SYNGAP1-202ENST00000418600 A0A0J9YWU9 116 aa12.89□□□□□ -0.35
SYNGAP1-202ENST00000418600 SPINK8P0C7L1 97 aa12.89□□□□□ -0.35
SYNGAP1-202ENST00000418600 BVES-AS1Q5T3Y7 98 aa12.89□□□□□ -0.35
SYNGAP1-202ENST00000418600 RNASE13Q5GAN3 156 aaKnown RBP12.89□□□□□ -0.35
SYNGAP1-202ENST00000418600 LOC105371267A0A1B0GV96 52 aa12.88□□□□□ -0.35
SYNGAP1-202ENST00000418600 LGALS9BQ3B8N2 356 aa12.88□□□□□ -0.35
SYNGAP1-202ENST00000418600 LGALS9CQ6DKI2 356 aa12.88□□□□□ -0.35
SYNGAP1-202ENST00000418600 IGHV4-28A0A0C4DH34 117 aa12.88□□□□□ -0.35
SYNGAP1-202ENST00000418600 IGKV1-17P01599 117 aa12.88□□□□□ -0.35
SYNGAP1-202ENST00000418600 C9orf153Q5TBE3 101 aa12.88□□□□□ -0.35
SYNGAP1-202ENST00000418600 UBE2V1Q13404 147 aa12.88□□□□□ -0.35
SYNGAP1-202ENST00000418600 C7orf33Q8WU49 177 aa12.88□□□□□ -0.35
SYNGAP1-202ENST00000418600 C18orf65Q6ZTR6 163 aa12.87□□□□□ -0.35
SYNGAP1-202ENST00000418600 SLC25A29Q8N8R3 303 aa12.87□□□□□ -0.35
SYNGAP1-202ENST00000418600 C18orf32Q8TCD1 76 aa12.87□□□□□ -0.35
SYNGAP1-202ENST00000418600 PSMB8P28062 276 aa12.87□□□□□ -0.35
SYNGAP1-202ENST00000418600 A8MWP6 167 aa12.87□□□□□ -0.35
SYNGAP1-202ENST00000418600 AVPP01185 164 aa12.87□□□□□ -0.35
SYNGAP1-202ENST00000418600 PPDPFLQ8WWR9 84 aa12.87□□□□□ -0.35
SYNGAP1-202ENST00000418600 FUSP35637 526 aaKnown RBP eCLIP12.87□□□□□ -0.35
SYNGAP1-202ENST00000418600 NDUFA1O15239 70 aa12.86□□□□□ -0.35
SYNGAP1-202ENST00000418600 IGHV4-30-4P0DP06 118 aa12.86□□□□□ -0.35
SYNGAP1-202ENST00000418600 CITED1Q99966 193 aa12.86□□□□□ -0.35
SYNGAP1-202ENST00000418600 PRO1854Q9UHT4 67 aa12.86□□□□□ -0.35
SYNGAP1-202ENST00000418600 DYSFO75923 2080 aa12.86□□□□□ -0.35
SYNGAP1-202ENST00000418600 F8VRH5 84 aa12.86□□□□□ -0.35
SYNGAP1-202ENST00000418600 NDUFB1O75438 58 aa12.86□□□□□ -0.35
SYNGAP1-202ENST00000418600 LRCOL1A6NCL2 159 aa12.86□□□□□ -0.35
SYNGAP1-202ENST00000418600 TRBV7-3A0A075B6L6 115 aa12.85□□□□□ -0.35
SYNGAP1-202ENST00000418600 KIR2DL5BA0A0G2JN68 375 aa12.85□□□□□ -0.35
SYNGAP1-202ENST00000418600 KIR2DL5BA0A0G2JPC4 375 aa12.85□□□□□ -0.35
SYNGAP1-202ENST00000418600 DLEU1O43261 78 aa12.85□□□□□ -0.35
SYNGAP1-202ENST00000418600 FGF6P10767 208 aa12.85□□□□□ -0.35
SYNGAP1-202ENST00000418600 KIR2DL5AQ8N109 375 aa12.85□□□□□ -0.35
SYNGAP1-202ENST00000418600 KIR2DL5BQ8NHK3 375 aa12.85□□□□□ -0.35
SYNGAP1-202ENST00000418600 J3QQQ9 107 aa12.85□□□□□ -0.35
SYNGAP1-202ENST00000418600 SMIM27A0A1W2PRY6 76 aa12.85□□□□□ -0.35
SYNGAP1-202ENST00000418600 LY6LH3BQJ8 138 aa12.85□□□□□ -0.35
SYNGAP1-202ENST00000418600 SPANXCQ9NY87 97 aa12.85□□□□□ -0.35
SYNGAP1-202ENST00000418600 EBI3Q14213 229 aa12.84□□□□□ -0.35
SYNGAP1-202ENST00000418600 PRR20EP86478 221 aa12.84□□□□□ -0.35
SYNGAP1-202ENST00000418600 PRR20CP86479 221 aa12.84□□□□□ -0.35
SYNGAP1-202ENST00000418600 PRR20DP86480 221 aa12.84□□□□□ -0.35
SYNGAP1-202ENST00000418600 PRR20BP86481 221 aa12.84□□□□□ -0.35
SYNGAP1-202ENST00000418600 PRR20AP86496 221 aa12.84□□□□□ -0.35
SYNGAP1-202ENST00000418600 C9orf47Q6ZRZ4 202 aa12.84□□□□□ -0.35
SYNGAP1-202ENST00000418600 C5orf38Q86SI9 138 aa12.84□□□□□ -0.35
SYNGAP1-202ENST00000418600 LINC00574Q9H8X3 128 aa12.84□□□□□ -0.35
SYNGAP1-202ENST00000418600 POLR3KQ9Y2Y1 108 aaPredicted RBP12.84□□□□□ -0.35
SYNGAP1-202ENST00000418600 LTAP01374 205 aa12.84□□□□□ -0.35
SYNGAP1-202ENST00000418600 ZNF124Q15973 351 aa12.84□□□□□ -0.35
SYNGAP1-202ENST00000418600 KIAA2026Q5HYC2 2103 aa12.83□□□□□ -0.35
SYNGAP1-202ENST00000418600 ORMDL1Q9P0S3 153 aa12.83□□□□□ -0.36
SYNGAP1-202ENST00000418600 CHD3Q12873 2000 aaKnown RBP12.83□□□□□ -0.36
SYNGAP1-202ENST00000418600 SIVA1O15304 175 aa12.83□□□□□ -0.36
SYNGAP1-202ENST00000418600 LINC01545Q5VT33 79 aa12.83□□□□□ -0.36
SYNGAP1-202ENST00000418600 ROS1P08922 2347 aa12.83□□□□□ -0.36
SYNGAP1-202ENST00000418600 MORN5Q5VZ52 161 aa12.83□□□□□ -0.36
SYNGAP1-202ENST00000418600 NANOS2P60321 138 aaKnown RBP12.82□□□□□ -0.36
SYNGAP1-202ENST00000418600 DSCAMO60469 2012 aa12.82□□□□□ -0.36
SYNGAP1-202ENST00000418600 F8W1H4 67 aa12.82□□□□□ -0.36
SYNGAP1-202ENST00000418600 EGR2P11161 476 aaPredicted RBP12.82□□□□□ -0.36
SYNGAP1-202ENST00000418600 PCNX1Q96RV3 2341 aa12.81□□□□□ -0.36
SYNGAP1-202ENST00000418600 LRP4O75096 1905 aa12.81□□□□□ -0.36
SYNGAP1-202ENST00000418600 IL15RAQ13261 267 aa12.81□□□□□ -0.36
SYNGAP1-202ENST00000418600 CARD19Q96LW7 228 aa12.81□□□□□ -0.36
SYNGAP1-202ENST00000418600 CACNA1DQ01668 2161 aa12.81□□□□□ -0.36
SYNGAP1-202ENST00000418600 IGKV2-24A0A0C4DH68 120 aa12.81□□□□□ -0.36
SYNGAP1-202ENST00000418600 DEFB1P60022 68 aa12.81□□□□□ -0.36
SYNGAP1-202ENST00000418600 TIMM17AQ99595 171 aa12.81□□□□□ -0.36
SYNGAP1-202ENST00000418600 PRSS47A8MTI9 375 aa12.8□□□□□ -0.36
SYNGAP1-202ENST00000418600 C9orf118A6NHY6 69 aa12.8□□□□□ -0.36
SYNGAP1-202ENST00000418600 NDUFS6O75380 124 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-202ENST00000418600 CHKB-CPT1BH3BT56 60 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms