RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	RAB31	Q13636	194 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	IL18	Q14116	193 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	STPG4	Q8N801	248 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	SMIM4	Q8WVI0	70 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	DEDD2	Q8WXF8	326 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	FXYD5	Q96DB9	178 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	SGK494	Q96LW2	274 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	AAMDC	Q9H7C9	122 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	GPN1	Q9HCN4	374 aa	Predicted RBP	5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	SLC39A9	Q9NUM3	307 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	MCUB	Q9NWR8	336 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	RNF24	Q9Y225	148 aa		5.25	□□□□□ -1.57
NIF3L1-206	ENST00000416651	TRBV7-9	A0A0J9YWB2	115 aa		5.24	□□□□□ -1.57
NIF3L1-206	ENST00000416651	ANG	P03950	147 aa	Known RBP	5.24	□□□□□ -1.57
NIF3L1-206	ENST00000416651	NBEAP1	P0C6P0	100 aa		5.24	□□□□□ -1.57
NIF3L1-206	ENST00000416651	PDE6H	Q13956	83 aa		5.24	□□□□□ -1.57
NIF3L1-206	ENST00000416651	OR1L4	Q8NGR5	311 aa		5.24	□□□□□ -1.57
NIF3L1-206	ENST00000416651	GFRA4	Q9GZZ7	299 aa		5.24	□□□□□ -1.57
NIF3L1-206	ENST00000416651	MED28	Q9H204	178 aa		5.24	□□□□□ -1.57
NIF3L1-206	ENST00000416651		A0A087WWC5	75 aa		5.23	□□□□□ -1.57
NIF3L1-206	ENST00000416651	PGP	A6NDG6	321 aa		5.23	□□□□□ -1.57
NIF3L1-206	ENST00000416651	RAB5C	P51148	216 aa		5.23	□□□□□ -1.57
NIF3L1-206	ENST00000416651	RAN	P62826	216 aa	Known RBP	5.23	□□□□□ -1.57
NIF3L1-206	ENST00000416651	ZNF674	Q2M3X9	581 aa		5.23	□□□□□ -1.57
NIF3L1-206	ENST00000416651	TMEM128	Q5BJH2	165 aa		5.23	□□□□□ -1.57
NIF3L1-206	ENST00000416651	PET117	Q6UWS5	81 aa		5.23	□□□□□ -1.57
NIF3L1-206	ENST00000416651		Q6ZRG5	221 aa		5.23	□□□□□ -1.57
NIF3L1-206	ENST00000416651	ASB13	Q8WXK3	278 aa		5.23	□□□□□ -1.57
NIF3L1-206	ENST00000416651	SDF2L1	Q9HCN8	221 aa		5.23	□□□□□ -1.57
NIF3L1-206	ENST00000416651	RABL2A	Q9UBK7	228 aa	Predicted RBP	5.23	□□□□□ -1.57
NIF3L1-206	ENST00000416651	HSPB11	Q9Y547	144 aa		5.23	□□□□□ -1.57
NIF3L1-206	ENST00000416651		A0A096LNI7	61 aa		5.22	□□□□□ -1.57
NIF3L1-206	ENST00000416651	C7orf66	A4D0T2	115 aa		5.22	□□□□□ -1.57
NIF3L1-206	ENST00000416651	INMT-MINDY4	F8WBC2	141 aa		5.22	□□□□□ -1.57
NIF3L1-206	ENST00000416651	LYRM1	O43325	122 aa		5.22	□□□□□ -1.57
NIF3L1-206	ENST00000416651	CST7	O76096	145 aa		5.22	□□□□□ -1.57
NIF3L1-206	ENST00000416651	CRP	P02741	224 aa		5.22	□□□□□ -1.57
NIF3L1-206	ENST00000416651	TCRB	P04435	133 aa		5.22	□□□□□ -1.57
NIF3L1-206	ENST00000416651	SSBP1	Q04837	148 aa	Known RBP	5.22	□□□□□ -1.57
NIF3L1-206	ENST00000416651	ELOB	Q15370	118 aa		5.22	□□□□□ -1.57
NIF3L1-206	ENST00000416651	SCP2D1	Q9UJQ7	156 aa		5.22	□□□□□ -1.57
NIF3L1-206	ENST00000416651	WDR83OS	Q9Y284	106 aa		5.22	□□□□□ -1.57
NIF3L1-206	ENST00000416651	ALG5	Q9Y673	324 aa		5.22	□□□□□ -1.57
NIF3L1-206	ENST00000416651	TRAV21	A0A0B4J279	112 aa		5.21	□□□□□ -1.58
NIF3L1-206	ENST00000416651	UBE2L5P	A0A1B0GUS4	154 aa		5.21	□□□□□ -1.58
NIF3L1-206	ENST00000416651	RBAKDN	A6NC62	111 aa		5.21	□□□□□ -1.58
NIF3L1-206	ENST00000416651	FAM231B	A6NCW3	169 aa		5.21	□□□□□ -1.58
NIF3L1-206	ENST00000416651	RPL29	P47914	159 aa	Known RBP	5.21	□□□□□ -1.58
NIF3L1-206	ENST00000416651	GNG5	P63218	68 aa		5.21	□□□□□ -1.58
NIF3L1-206	ENST00000416651	SMUG1	Q53HV7	270 aa		5.21	□□□□□ -1.58
NIF3L1-206	ENST00000416651	SLC51B	Q86UW2	128 aa		5.21	□□□□□ -1.58
NIF3L1-206	ENST00000416651	LINC00269	Q8N2A0	174 aa		5.21	□□□□□ -1.58
NIF3L1-206	ENST00000416651	OR10G9	Q8NGN4	311 aa		5.21	□□□□□ -1.58
NIF3L1-206	ENST00000416651	OR10G7	Q8NGN6	311 aa		5.21	□□□□□ -1.58
NIF3L1-206	ENST00000416651	OR2G3	Q8NGZ4	309 aa		5.21	□□□□□ -1.58
NIF3L1-206	ENST00000416651	PFDN5	Q99471	154 aa		5.21	□□□□□ -1.58
NIF3L1-206	ENST00000416651		V9GYH0	126 aa		5.21	□□□□□ -1.58
NIF3L1-206	ENST00000416651	TRAV26-2	A0A0B4J265	109 aa		5.2	□□□□□ -1.58
NIF3L1-206	ENST00000416651	LINC00862	A6NCI5	91 aa		5.2	□□□□□ -1.58
NIF3L1-206	ENST00000416651	TAAR5	O14804	337 aa		5.2	□□□□□ -1.58
NIF3L1-206	ENST00000416651	SEC11B	P0C7V7	166 aa		5.2	□□□□□ -1.58
NIF3L1-206	ENST00000416651	AP3S2	P59780	193 aa		5.2	□□□□□ -1.58
NIF3L1-206	ENST00000416651	UBE2D3	P61077	147 aa		5.2	□□□□□ -1.58
NIF3L1-206	ENST00000416651	UBE2D2	P62837	147 aa		5.2	□□□□□ -1.58
NIF3L1-206	ENST00000416651	LGALSL	Q3ZCW2	172 aa	Predicted RBP	5.2	□□□□□ -1.58
NIF3L1-206	ENST00000416651	NTM-AS1	Q6ZSK4	140 aa		5.2	□□□□□ -1.58
NIF3L1-206	ENST00000416651	COMMD7	Q86VX2	200 aa		5.2	□□□□□ -1.58
NIF3L1-206	ENST00000416651	C12orf45	Q8N5I9	185 aa	Predicted RBP	5.2	□□□□□ -1.58
NIF3L1-206	ENST00000416651	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	5.2	□□□□□ -1.58
NIF3L1-206	ENST00000416651	SCGB3A2	Q96PL1	93 aa		5.2	□□□□□ -1.58
NIF3L1-206	ENST00000416651	CHCHD7	Q9BUK0	85 aa		5.2	□□□□□ -1.58
NIF3L1-206	ENST00000416651	PRR34	Q9NV39	138 aa		5.2	□□□□□ -1.58
NIF3L1-206	ENST00000416651	CCS	O14618	274 aa		5.19	□□□□□ -1.58
NIF3L1-206	ENST00000416651	SSNA1	O43805	119 aa		5.19	□□□□□ -1.58
NIF3L1-206	ENST00000416651	CIDEA	O60543	219 aa		5.19	□□□□□ -1.58
NIF3L1-206	ENST00000416651	BAX	Q07812	192 aa		5.19	□□□□□ -1.58
NIF3L1-206	ENST00000416651	GAGE6	Q13070	117 aa		5.19	□□□□□ -1.58
NIF3L1-206	ENST00000416651	MIA	Q16674	131 aa		5.19	□□□□□ -1.58
NIF3L1-206	ENST00000416651	ZFP2	Q6ZN57	461 aa		5.19	□□□□□ -1.58
NIF3L1-206	ENST00000416651	GOLT1A	Q6ZVE7	132 aa		5.19	□□□□□ -1.58
NIF3L1-206	ENST00000416651	C15orf56	Q8N910	161 aa		5.19	□□□□□ -1.58
NIF3L1-206	ENST00000416651	INO80E	Q8NBZ0	244 aa	Predicted RBP	5.19	□□□□□ -1.58
NIF3L1-206	ENST00000416651	SDHC	Q99643	169 aa	Predicted RBP	5.19	□□□□□ -1.58
NIF3L1-206	ENST00000416651	GGACT	Q9BVM4	153 aa		5.19	□□□□□ -1.58
NIF3L1-206	ENST00000416651	C11orf1	Q9H5F2	150 aa		5.19	□□□□□ -1.58
NIF3L1-206	ENST00000416651	TREM1	Q9NP99	234 aa		5.19	□□□□□ -1.58
NIF3L1-206	ENST00000416651	GSKIP	Q9P0R6	139 aa		5.19	□□□□□ -1.58
NIF3L1-206	ENST00000416651	LENEP	Q9Y5L5	61 aa		5.19	□□□□□ -1.58
NIF3L1-206	ENST00000416651	TRBV6-8	A0A0A6YYG3	113 aa		5.18	□□□□□ -1.58
NIF3L1-206	ENST00000416651	LOC105371267	A0A1B0GV96	52 aa		5.18	□□□□□ -1.58
NIF3L1-206	ENST00000416651	C9orf170	A2RU37	121 aa		5.18	□□□□□ -1.58
NIF3L1-206	ENST00000416651	FGF7	P21781	194 aa		5.18	□□□□□ -1.58
NIF3L1-206	ENST00000416651	CSN1S1	P47710	185 aa		5.18	□□□□□ -1.58
NIF3L1-206	ENST00000416651	FGF8	P55075	233 aa	Predicted RBP	5.18	□□□□□ -1.58
NIF3L1-206	ENST00000416651	RBX1	P62877	108 aa		5.18	□□□□□ -1.58
NIF3L1-206	ENST00000416651	CACNG7	P62955	275 aa		5.18	□□□□□ -1.58
NIF3L1-206	ENST00000416651	HIGD2B	Q4VC39	106 aa		5.18	□□□□□ -1.58
NIF3L1-206	ENST00000416651	CLLU1	Q5K131	121 aa		5.18	□□□□□ -1.58
NIF3L1-206	ENST00000416651	FAM74A4	Q5TZK3	123 aa		5.18	□□□□□ -1.58
NIF3L1-206	ENST00000416651		Q6ZRP5	223 aa		5.18	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms