RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 PTH2Q96A98 100 aa7.35□□□□□ -1.23
DEPDC4-203ENST00000416321 MRAP2Q96G30 205 aa7.35□□□□□ -1.23
DEPDC4-203ENST00000416321 NDUFAF3Q9BU61 184 aa7.35□□□□□ -1.23
DEPDC4-203ENST00000416321 MRPL16Q9NX20 251 aaKnown RBP7.35□□□□□ -1.23
DEPDC4-203ENST00000416321 A0A087WWL8 130 aa7.34□□□□□ -1.23
DEPDC4-203ENST00000416321 D6R8Y8 96 aa7.34□□□□□ -1.23
DEPDC4-203ENST00000416321 RAB4AP20338 218 aa7.34□□□□□ -1.23
DEPDC4-203ENST00000416321 EMP1P54849 157 aa7.34□□□□□ -1.23
DEPDC4-203ENST00000416321 ZNF56Q15929 161 aa7.34□□□□□ -1.23
DEPDC4-203ENST00000416321 LGALS9BQ3B8N2 356 aa7.34□□□□□ -1.23
DEPDC4-203ENST00000416321 OR10J3Q5JRS4 329 aa7.34□□□□□ -1.23
DEPDC4-203ENST00000416321 PRELID3AQ96N28 172 aa7.34□□□□□ -1.23
DEPDC4-203ENST00000416321 ALKBH7Q9BT30 221 aaPredicted RBP7.34□□□□□ -1.23
DEPDC4-203ENST00000416321 NOP10Q9NPE3 64 aaKnown RBP7.34□□□□□ -1.23
DEPDC4-203ENST00000416321 CMYA5Q8N3K9 4069 aa7.33□□□□□ -1.24
DEPDC4-203ENST00000416321 RHODO00212 210 aa7.33□□□□□ -1.24
DEPDC4-203ENST00000416321 MIFP14174 115 aa7.33□□□□□ -1.24
DEPDC4-203ENST00000416321 DAZ2Q13117 558 aaKnown RBP7.33□□□□□ -1.24
DEPDC4-203ENST00000416321 KPRPQ5T749 579 aaPredicted RBP7.33□□□□□ -1.24
DEPDC4-203ENST00000416321 RASL10AQ92737 203 aa7.33□□□□□ -1.24
DEPDC4-203ENST00000416321 RNF183Q96D59 192 aa7.33□□□□□ -1.24
DEPDC4-203ENST00000416321 RNF185Q96GF1 192 aa7.33□□□□□ -1.24
DEPDC4-203ENST00000416321 LAMTOR2Q9Y2Q5 125 aa7.33□□□□□ -1.24
DEPDC4-203ENST00000416321 X6R8D5 127 aa7.33□□□□□ -1.24
DEPDC4-203ENST00000416321 MUC4Q99102 2169 aa7.33□□□□□ -1.24
DEPDC4-203ENST00000416321 TRGV2A0A075B6R0 118 aa7.32□□□□□ -1.24
DEPDC4-203ENST00000416321 SMKR1H3BMG3 65 aa7.32□□□□□ -1.24
DEPDC4-203ENST00000416321 FAM229AH3BQW9 127 aa7.32□□□□□ -1.24
DEPDC4-203ENST00000416321 NCR2O95944 276 aa7.32□□□□□ -1.24
DEPDC4-203ENST00000416321 PPP1R17O96001 155 aa7.32□□□□□ -1.24
DEPDC4-203ENST00000416321 PRB2P02812 416 aaPredicted RBP7.32□□□□□ -1.24
DEPDC4-203ENST00000416321 Q0VG73 95 aa7.32□□□□□ -1.24
DEPDC4-203ENST00000416321 DEFB121Q5J5C9 76 aa7.32□□□□□ -1.24
DEPDC4-203ENST00000416321 OR4C5Q8NGB2 326 aa7.32□□□□□ -1.24
DEPDC4-203ENST00000416321 IL17DQ8TAD2 202 aa7.32□□□□□ -1.24
DEPDC4-203ENST00000416321 OVOL2Q9BRP0 275 aa7.32□□□□□ -1.24
DEPDC4-203ENST00000416321 MAP1LC3AQ9H492 121 aa7.32□□□□□ -1.24
DEPDC4-203ENST00000416321 JPT2Q9H910 190 aa7.32□□□□□ -1.24
DEPDC4-203ENST00000416321 TP53TG1Q9Y2A0 90 aa7.32□□□□□ -1.24
DEPDC4-203ENST00000416321 GAGE12BA1L429 117 aa7.31□□□□□ -1.24
DEPDC4-203ENST00000416321 H7C1H1 209 aa7.31□□□□□ -1.24
DEPDC4-203ENST00000416321 GAGE7O76087 117 aa7.31□□□□□ -1.24
DEPDC4-203ENST00000416321 GAGE12FP0CL80 117 aa7.31□□□□□ -1.24
DEPDC4-203ENST00000416321 GAGE12GP0CL81 117 aa7.31□□□□□ -1.24
DEPDC4-203ENST00000416321 GAGE12IP0CL82 117 aa7.31□□□□□ -1.24
DEPDC4-203ENST00000416321 S100A2P29034 98 aa7.31□□□□□ -1.24
DEPDC4-203ENST00000416321 SNRPEP62304 92 aaKnown RBP7.31□□□□□ -1.24
DEPDC4-203ENST00000416321 Q6ZTI0 123 aa7.31□□□□□ -1.24
DEPDC4-203ENST00000416321 C18orf32Q8TCD1 76 aa7.31□□□□□ -1.24
DEPDC4-203ENST00000416321 KIF25-AS1Q9Y6Z4 181 aa7.31□□□□□ -1.24
DEPDC4-203ENST00000416321 U3KQK5 164 aa7.31□□□□□ -1.24
DEPDC4-203ENST00000416321 IGHV3-73A0A0B4J1V6 119 aa7.3□□□□□ -1.24
DEPDC4-203ENST00000416321 TRAV26-2A0A0B4J265 109 aa7.3□□□□□ -1.24
DEPDC4-203ENST00000416321 TRAV4A0A0B4J268 109 aa7.3□□□□□ -1.24
DEPDC4-203ENST00000416321 IGHV4-28A0A0C4DH34 117 aa7.3□□□□□ -1.24
DEPDC4-203ENST00000416321 PLAC8L1A1L4L8 177 aa7.3□□□□□ -1.24
DEPDC4-203ENST00000416321 RS1O15537 224 aa7.3□□□□□ -1.24
DEPDC4-203ENST00000416321 TNFRSF6BO95407 300 aa7.3□□□□□ -1.24
DEPDC4-203ENST00000416321 NPYP01303 97 aa7.3□□□□□ -1.24
DEPDC4-203ENST00000416321 CRYGDP07320 174 aa7.3□□□□□ -1.24
DEPDC4-203ENST00000416321 IQCJQ1A5X6 159 aa7.3□□□□□ -1.24
DEPDC4-203ENST00000416321 CFAP126Q5VTH2 177 aa7.3□□□□□ -1.24
DEPDC4-203ENST00000416321 SUMO4Q6EEV6 95 aa7.3□□□□□ -1.24
DEPDC4-203ENST00000416321 RNASEKQ6P5S7 137 aaKnown RBP7.3□□□□□ -1.24
DEPDC4-203ENST00000416321 FA2HQ7L5A8 372 aa7.3□□□□□ -1.24
DEPDC4-203ENST00000416321 PRSS3P2Q8NHM4 247 aa7.3□□□□□ -1.24
DEPDC4-203ENST00000416321 SAMD10Q9BYL1 202 aa7.3□□□□□ -1.24
DEPDC4-203ENST00000416321 LOC389332A0A1B0GUA5 103 aa7.29□□□□□ -1.24
DEPDC4-203ENST00000416321 TEX48A0A1B0GUV7 120 aa7.29□□□□□ -1.24
DEPDC4-203ENST00000416321 LYRM9A8MSI8 78 aa7.29□□□□□ -1.24
DEPDC4-203ENST00000416321 K7EIL1 84 aa7.29□□□□□ -1.24
DEPDC4-203ENST00000416321 CIDEAO60543 219 aa7.29□□□□□ -1.24
DEPDC4-203ENST00000416321 PMCHP20382 165 aa7.29□□□□□ -1.24
DEPDC4-203ENST00000416321 COA6Q5JTJ3 125 aaKnown RBP7.29□□□□□ -1.24
DEPDC4-203ENST00000416321 ZFP2Q6ZN57 461 aa7.29□□□□□ -1.24
DEPDC4-203ENST00000416321 POM121L12Q8N7R1 296 aa7.29□□□□□ -1.24
DEPDC4-203ENST00000416321 SPATA25Q9BR10 227 aa7.29□□□□□ -1.24
DEPDC4-203ENST00000416321 C5orf52A6NGY3 159 aa7.28□□□□□ -1.24
DEPDC4-203ENST00000416321 EREGO14944 169 aa7.28□□□□□ -1.24
DEPDC4-203ENST00000416321 HSBP1O75506 76 aa7.28□□□□□ -1.24
DEPDC4-203ENST00000416321 SERF1AO75920 110 aa7.28□□□□□ -1.24
DEPDC4-203ENST00000416321 IGHV3-53P01767 116 aa7.28□□□□□ -1.24
DEPDC4-203ENST00000416321 DEFB130BP0DP73 79 aa7.28□□□□□ -1.24
DEPDC4-203ENST00000416321 DEFB130AP0DP74 79 aa7.28□□□□□ -1.24
DEPDC4-203ENST00000416321 LINC00315P59091 139 aa7.28□□□□□ -1.24
DEPDC4-203ENST00000416321 PDZD11Q5EBL8 140 aa7.28□□□□□ -1.24
DEPDC4-203ENST00000416321 FAM222AQ5U5X8 452 aa7.28□□□□□ -1.24
DEPDC4-203ENST00000416321 Q8NAQ8 132 aa7.28□□□□□ -1.24
DEPDC4-203ENST00000416321 CHCHD1Q96BP2 118 aaKnown RBP7.28□□□□□ -1.24
DEPDC4-203ENST00000416321 C20orf78Q9BR46 151 aa7.28□□□□□ -1.24
DEPDC4-203ENST00000416321 ST20Q9HBF5 79 aa7.28□□□□□ -1.24
DEPDC4-203ENST00000416321 NXT2Q9NPJ8 142 aaKnown RBP7.28□□□□□ -1.24
DEPDC4-203ENST00000416321 TRGV4A0A0C4DH28 118 aa7.27□□□□□ -1.25
DEPDC4-203ENST00000416321 DEFB4AO15263 64 aa7.27□□□□□ -1.25
DEPDC4-203ENST00000416321 LINC00614P0C842 121 aa7.27□□□□□ -1.25
DEPDC4-203ENST00000416321 SPART-AS1P0CW21 52 aa7.27□□□□□ -1.25
DEPDC4-203ENST00000416321 GATA1P15976 413 aaPredicted RBP7.27□□□□□ -1.25
DEPDC4-203ENST00000416321 HOXA5P20719 270 aa7.27□□□□□ -1.25
DEPDC4-203ENST00000416321 DAD1P61803 113 aa7.27□□□□□ -1.25
DEPDC4-203ENST00000416321 SUMO2P61956 95 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms