RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 GAGE12JA6NER3 117 aa12.81□□□□□ -0.36
TRIM56-202ENST00000412507 BTF3P20290 206 aaKnown RBP12.81□□□□□ -0.36
TRIM56-202ENST00000412507 TAGLN2P37802 199 aaKnown RBP12.81□□□□□ -0.36
TRIM56-202ENST00000412507 GNG4P50150 75 aa12.81□□□□□ -0.36
TRIM56-202ENST00000412507 GAGE1Q13065 139 aa12.81□□□□□ -0.36
TRIM56-202ENST00000412507 GAGE4Q13068 117 aa12.81□□□□□ -0.36
TRIM56-202ENST00000412507 GAGE5Q13069 117 aa12.81□□□□□ -0.36
TRIM56-202ENST00000412507 GAGE13Q4V321 117 aa12.81□□□□□ -0.36
TRIM56-202ENST00000412507 OR10AG1Q8NH19 301 aa12.81□□□□□ -0.36
TRIM56-202ENST00000412507 ATP6V0E2Q8NHE4 81 aa12.81□□□□□ -0.36
TRIM56-202ENST00000412507 Q9UF83 564 aa12.81□□□□□ -0.36
TRIM56-202ENST00000412507 TNFRSF18Q9Y5U5 241 aa12.81□□□□□ -0.36
TRIM56-202ENST00000412507 CRYGDP07320 174 aa12.8□□□□□ -0.36
TRIM56-202ENST00000412507 KIAA1109Q2LD37 5005 aa12.79□□□□□ -0.36
TRIM56-202ENST00000412507 TRBV20OR9-2A0A075B6H5 130 aa12.79□□□□□ -0.36
TRIM56-202ENST00000412507 TRAV9-2A0A087WT02 112 aa12.79□□□□□ -0.36
TRIM56-202ENST00000412507 MUC21A0A0G2JKD1 596 aa12.79□□□□□ -0.36
TRIM56-202ENST00000412507 MUC21A0A140T8X8 626 aa12.79□□□□□ -0.36
TRIM56-202ENST00000412507 SNAI2O43623 268 aa12.79□□□□□ -0.36
TRIM56-202ENST00000412507 DNAH10OSP0CZ25 163 aa12.79□□□□□ -0.36
TRIM56-202ENST00000412507 EVI2AP22794 236 aa12.79□□□□□ -0.36
TRIM56-202ENST00000412507 SSBP4Q9BWG4 385 aaPredicted RBP12.79□□□□□ -0.36
TRIM56-202ENST00000412507 GTSF1LQ9H1H1 148 aa12.79□□□□□ -0.36
TRIM56-202ENST00000412507 LINC00694P0DN24 101 aa12.78□□□□□ -0.36
TRIM56-202ENST00000412507 OR10J3Q5JRS4 329 aa12.78□□□□□ -0.36
TRIM56-202ENST00000412507 Q6ZRN7 208 aaPredicted RBP12.78□□□□□ -0.36
TRIM56-202ENST00000412507 DAZAP1Q96EP5 407 aaKnown RBP12.78□□□□□ -0.36
TRIM56-202ENST00000412507 SMIM12Q96EX1 92 aa12.78□□□□□ -0.36
TRIM56-202ENST00000412507 TRAV8-6A0A0B4J262 113 aa12.77□□□□□ -0.37
TRIM56-202ENST00000412507 IGHV3-38A0A0C4DH36 116 aa12.77□□□□□ -0.37
TRIM56-202ENST00000412507 C19orf71A6NCJ1 209 aa12.77□□□□□ -0.37
TRIM56-202ENST00000412507 OR5AL1P0C617 328 aa12.77□□□□□ -0.37
TRIM56-202ENST00000412507 GZMBP10144 247 aa12.77□□□□□ -0.37
TRIM56-202ENST00000412507 SSTP61278 116 aa12.77□□□□□ -0.37
TRIM56-202ENST00000412507 LELP1Q5T871 98 aa12.77□□□□□ -0.37
TRIM56-202ENST00000412507 SPANXN1Q5VSR9 72 aa12.76□□□□□ -0.37
TRIM56-202ENST00000412507 OR2D3Q8NGH3 330 aa12.76□□□□□ -0.37
TRIM56-202ENST00000412507 HERC2O95714 4834 aa12.76□□□□□ -0.37
TRIM56-202ENST00000412507 RBFOX3A6NFN3 312 aa12.75□□□□□ -0.37
TRIM56-202ENST00000412507 K7EP13 123 aa12.75□□□□□ -0.37
TRIM56-202ENST00000412507 RPS20P60866 119 aaKnown RBP12.74□□□□□ -0.37
TRIM56-202ENST00000412507 FAM210AQ96ND0 272 aa12.74□□□□□ -0.37
TRIM56-202ENST00000412507 BIN3Q9NQY0 253 aa12.74□□□□□ -0.37
TRIM56-202ENST00000412507 MSRB1Q9NZV6 116 aa12.74□□□□□ -0.37
TRIM56-202ENST00000412507 P01737 135 aa12.73□□□□□ -0.37
TRIM56-202ENST00000412507 IGLC6P0CF74 106 aa12.73□□□□□ -0.37
TRIM56-202ENST00000412507 ZNF56Q15929 161 aa12.73□□□□□ -0.37
TRIM56-202ENST00000412507 LINC01556Q5JQF7 62 aa12.73□□□□□ -0.37
TRIM56-202ENST00000412507 NFE4Q86UQ8 179 aa12.73□□□□□ -0.37
TRIM56-202ENST00000412507 C10orf126Q8N4M7 172 aa12.73□□□□□ -0.37
TRIM56-202ENST00000412507 TPPP3Q9BW30 176 aa12.73□□□□□ -0.37
TRIM56-202ENST00000412507 IGHV3-30P01768 117 aa12.72□□□□□ -0.37
TRIM56-202ENST00000412507 IGHV3-33P01772 117 aa12.72□□□□□ -0.37
TRIM56-202ENST00000412507 IGHV3-30-3P0DP02 117 aa12.72□□□□□ -0.37
TRIM56-202ENST00000412507 IGHV3-30-5P0DP03 117 aa12.72□□□□□ -0.37
TRIM56-202ENST00000412507 RAB4BP61018 213 aa12.72□□□□□ -0.37
TRIM56-202ENST00000412507 SPATA12Q7Z6I5 190 aa12.72□□□□□ -0.37
TRIM56-202ENST00000412507 FER1L6-AS1Q8NA97 138 aa12.72□□□□□ -0.37
TRIM56-202ENST00000412507 EIF5A2Q9GZV4 153 aaKnown RBP12.72□□□□□ -0.37
TRIM56-202ENST00000412507 SMDT1Q9H4I9 107 aa12.72□□□□□ -0.37
TRIM56-202ENST00000412507 LINC00862A6NCI5 91 aa12.71□□□□□ -0.37
TRIM56-202ENST00000412507 NDUFS6O75380 124 aaKnown RBP12.71□□□□□ -0.37
TRIM56-202ENST00000412507 PEA15Q15121 130 aa12.71□□□□□ -0.37
TRIM56-202ENST00000412507 TOR2AQ5JU69 321 aa12.71□□□□□ -0.37
TRIM56-202ENST00000412507 NUDT10Q8NFP7 164 aa12.71□□□□□ -0.37
TRIM56-202ENST00000412507 OCC1Q8TAD7 63 aa12.71□□□□□ -0.37
TRIM56-202ENST00000412507 NUDT11Q96G61 164 aa12.71□□□□□ -0.37
TRIM56-202ENST00000412507 DNAH5Q8TE73 4624 aa12.7□□□□□ -0.38
TRIM56-202ENST00000412507 TRBV10-1A0A0K0K1A3 114 aa12.7□□□□□ -0.38
TRIM56-202ENST00000412507 XKRY2A2RUG3 117 aa12.7□□□□□ -0.38
TRIM56-202ENST00000412507 C16orf90A8MZG2 172 aa12.7□□□□□ -0.38
TRIM56-202ENST00000412507 TMEM250H0YL14 139 aa12.7□□□□□ -0.38
TRIM56-202ENST00000412507 K7EN84 100 aa12.7□□□□□ -0.38
TRIM56-202ENST00000412507 RPL36AP83881 106 aaKnown RBP12.7□□□□□ -0.38
TRIM56-202ENST00000412507 RPL36ALQ969Q0 106 aaKnown RBP12.7□□□□□ -0.38
TRIM56-202ENST00000412507 F5H697 171 aa12.69□□□□□ -0.38
TRIM56-202ENST00000412507 CEBPGP53567 150 aa12.69□□□□□ -0.38
TRIM56-202ENST00000412507 NDUFA5Q16718 116 aa12.69□□□□□ -0.38
TRIM56-202ENST00000412507 Q8N3U1 123 aa12.69□□□□□ -0.38
TRIM56-202ENST00000412507 AP1S3Q96PC3 154 aa12.69□□□□□ -0.38
TRIM56-202ENST00000412507 RNASE7Q9H1E1 156 aaKnown RBP12.69□□□□□ -0.38
TRIM56-202ENST00000412507 KIF25-AS1Q9Y6Z4 181 aa12.69□□□□□ -0.38
TRIM56-202ENST00000412507 TRBV7-3A0A075B6L6 115 aa12.68□□□□□ -0.38
TRIM56-202ENST00000412507 A0A087WWC5 75 aa12.68□□□□□ -0.38
TRIM56-202ENST00000412507 IBA57-AS1B1ANH7 110 aa12.68□□□□□ -0.38
TRIM56-202ENST00000412507 SMIM17P0DL12 118 aa12.68□□□□□ -0.38
TRIM56-202ENST00000412507 KRTAP10-2P60368 255 aa12.68□□□□□ -0.38
TRIM56-202ENST00000412507 UBE2D3P61077 147 aa12.68□□□□□ -0.38
TRIM56-202ENST00000412507 UBE2D2P62837 147 aa12.68□□□□□ -0.38
TRIM56-202ENST00000412507 UQCC3Q6UW78 93 aa12.68□□□□□ -0.38
TRIM56-202ENST00000412507 LYZL1Q6UWQ5 148 aa12.68□□□□□ -0.38
TRIM56-202ENST00000412507 COMMD7Q86VX2 200 aa12.68□□□□□ -0.38
TRIM56-202ENST00000412507 NEXN-AS1Q8NBZ9 246 aa12.68□□□□□ -0.38
TRIM56-202ENST00000412507 LRP1BQ9NZR2 4599 aa12.68□□□□□ -0.38
TRIM56-202ENST00000412507 ERVFC1-1P60608 527 aa12.67□□□□□ -0.38
TRIM56-202ENST00000412507 CACNG7P62955 275 aa12.67□□□□□ -0.38
TRIM56-202ENST00000412507 OR10G8Q8NGN5 311 aa12.67□□□□□ -0.38
TRIM56-202ENST00000412507 F2Z2F3 143 aa12.66□□□□□ -0.38
TRIM56-202ENST00000412507 RPP21Q9H633 154 aaKnown RBP12.66□□□□□ -0.38
TRIM56-202ENST00000412507 Q9HAA7 133 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms