RNA–Protein interactions for RNA: ENST00000411690.2

LINC00396-201, long intergenic non-protein coding RNA 396, humanhuman

TSL 3 BASIC

Gene LINC00396, Length 439 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00396-201ENST00000411690 HIST1H1EP10412 219 aaKnown RBP3.97□□□□□ -1.77
LINC00396-201ENST00000411690 GATA1P15976 413 aaPredicted RBP3.97□□□□□ -1.77
LINC00396-201ENST00000411690 FGF7P21781 194 aa3.97□□□□□ -1.77
LINC00396-201ENST00000411690 PLP1P60201 277 aa3.97□□□□□ -1.77
LINC00396-201ENST00000411690 SUMO1P63165 101 aaKnown RBP3.97□□□□□ -1.77
LINC00396-201ENST00000411690 CIRBPQ14011 172 aaKnown RBP3.97□□□□□ -1.77
LINC00396-201ENST00000411690 ZNF266Q14584 549 aa3.97□□□□□ -1.77
LINC00396-201ENST00000411690 GUK1Q16774 197 aa3.97□□□□□ -1.77
LINC00396-201ENST00000411690 ATRAIDQ6UW56 229 aa3.97□□□□□ -1.77
LINC00396-201ENST00000411690 TMEM14EPQ6UXP3 125 aa3.97□□□□□ -1.77
LINC00396-201ENST00000411690 LINC00518Q8N0U6 118 aa3.97□□□□□ -1.77
LINC00396-201ENST00000411690 C15orf54Q8N8G6 183 aa3.97□□□□□ -1.77
LINC00396-201ENST00000411690 PRADC1Q9BSG0 188 aa3.97□□□□□ -1.77
LINC00396-201ENST00000411690 SH3BGRL3Q9H299 93 aa3.97□□□□□ -1.77
LINC00396-201ENST00000411690 AAMDCQ9H7C9 122 aa3.97□□□□□ -1.77
LINC00396-201ENST00000411690 TREM1Q9NP99 234 aa3.97□□□□□ -1.77
LINC00396-201ENST00000411690 OR5AC2Q9NZP5 309 aa3.97□□□□□ -1.77
LINC00396-201ENST00000411690 FAM74A7A6NL05 159 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 PRSS46E5RG02 174 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 H7C1H1 209 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 SLC17A3O00476 420 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 MT-ND4LP03901 98 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 S100A8P05109 93 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 PRSS1P07477 247 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 CSN1S1P47710 185 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 PRR3P79522 188 aaKnown RBP3.96□□□□□ -1.78
LINC00396-201ENST00000411690 RPL19P84098 196 aaKnown RBP3.96□□□□□ -1.78
LINC00396-201ENST00000411690 ERCC8Q13216 396 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 RHEBQ15382 184 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 PRR4Q16378 134 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 FAM74A3Q4VXF1 159 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 TMEM78Q5T7P6 136 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 MIC13Q5XKP0 118 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 Q6ZQT7 251 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 SLC25A29Q8N8R3 303 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 GTSF1Q8WW33 167 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 UBE2WQ96B02 151 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 RNF185Q96GF1 192 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 LINC00477Q96M19 166 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 TCEAL7Q9BRU2 100 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 SPXQ9BT56 116 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 OR51M1Q9H341 326 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 KCNIP2Q9NS61 270 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 KLK12Q9UKR0 248 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 URGCP-MRPS24S4R325 110 aa3.96□□□□□ -1.78
LINC00396-201ENST00000411690 FAM231BA6NCW3 169 aa3.95□□□□□ -1.78
LINC00396-201ENST00000411690 FAM24AA6NFZ4 105 aa3.95□□□□□ -1.78
LINC00396-201ENST00000411690 USP17L23D6RBM5 183 aa3.95□□□□□ -1.78
LINC00396-201ENST00000411690 C17orf112F2Z3M2 114 aa3.95□□□□□ -1.78
LINC00396-201ENST00000411690 ADCYAP1P18509 176 aa3.95□□□□□ -1.78
LINC00396-201ENST00000411690 SULT1A1P50225 295 aa3.95□□□□□ -1.78
LINC00396-201ENST00000411690 RAB5BP61020 215 aa3.95□□□□□ -1.78
LINC00396-201ENST00000411690 RHOHQ15669 191 aa3.95□□□□□ -1.78
LINC00396-201ENST00000411690 ATP6V1FQ16864 119 aa3.95□□□□□ -1.78
LINC00396-201ENST00000411690 RPL7L1Q6DKI1 246 aaKnown RBP3.95□□□□□ -1.78
LINC00396-201ENST00000411690 FAM19A4Q96LR4 140 aa3.95□□□□□ -1.78
LINC00396-201ENST00000411690 MGST2Q99735 147 aa3.95□□□□□ -1.78
LINC00396-201ENST00000411690 C1orf43Q9BWL3 253 aa3.95□□□□□ -1.78
LINC00396-201ENST00000411690 C11orf1Q9H5F2 150 aa3.95□□□□□ -1.78
LINC00396-201ENST00000411690 A0A087WWC5 75 aa3.94□□□□□ -1.78
LINC00396-201ENST00000411690 TRAV1-1A0A0B4J248 108 aa3.94□□□□□ -1.78
LINC00396-201ENST00000411690 TRAV26-2A0A0B4J265 109 aa3.94□□□□□ -1.78
LINC00396-201ENST00000411690 TRBV6-4A0A1B0GX49 114 aa3.94□□□□□ -1.78
LINC00396-201ENST00000411690 FBLL1A6NHQ2 334 aaKnown RBP3.94□□□□□ -1.78
LINC00396-201ENST00000411690 COLCA2A8K830 154 aa3.94□□□□□ -1.78
LINC00396-201ENST00000411690 C1orf196B1AJZ1 125 aa3.94□□□□□ -1.78
LINC00396-201ENST00000411690 OR7C2O60412 319 aa3.94□□□□□ -1.78
LINC00396-201ENST00000411690 CHTF8P0CG12 524 aa3.94□□□□□ -1.78
LINC00396-201ENST00000411690 CRISP2P16562 243 aa3.94□□□□□ -1.78
LINC00396-201ENST00000411690 RAB2AP61019 212 aa3.94□□□□□ -1.78
LINC00396-201ENST00000411690 Q0VG73 95 aa3.94□□□□□ -1.78
LINC00396-201ENST00000411690 MUC21Q5SSG8 566 aa3.94□□□□□ -1.78
LINC00396-201ENST00000411690 PRR9Q5T870 116 aa3.94□□□□□ -1.78
LINC00396-201ENST00000411690 PATE2Q6UY27 113 aa3.94□□□□□ -1.78
LINC00396-201ENST00000411690 NIT1Q86X76 327 aa3.94□□□□□ -1.78
LINC00396-201ENST00000411690 ZFAND2AQ8N6M9 145 aa3.94□□□□□ -1.78
LINC00396-201ENST00000411690 AGPAT4-IT1Q9H0P7 198 aa3.94□□□□□ -1.78
LINC00396-201ENST00000411690 SLC39A9Q9NUM3 307 aa3.94□□□□□ -1.78
LINC00396-201ENST00000411690 PLAC8Q9NZF1 115 aa3.94□□□□□ -1.78
LINC00396-201ENST00000411690 WDR83OSQ9Y284 106 aa3.94□□□□□ -1.78
LINC00396-201ENST00000411690 TRGV11A0A075B6L2 103 aa3.93□□□□□ -1.78
LINC00396-201ENST00000411690 B4DEV8 164 aa3.93□□□□□ -1.78
LINC00396-201ENST00000411690 H3BQ15 152 aa3.93□□□□□ -1.78
LINC00396-201ENST00000411690 M0R2P5 195 aa3.93□□□□□ -1.78
LINC00396-201ENST00000411690 HLA-DQA1P01909 254 aa3.93□□□□□ -1.78
LINC00396-201ENST00000411690 SMIM6P0DI80 62 aa3.93□□□□□ -1.78
LINC00396-201ENST00000411690 TAGLN2P37802 199 aaKnown RBP3.93□□□□□ -1.78
LINC00396-201ENST00000411690 RPL29P47914 159 aaKnown RBP3.93□□□□□ -1.78
LINC00396-201ENST00000411690 ARL16Q0P5N6 197 aa3.93□□□□□ -1.78
LINC00396-201ENST00000411690 SRSF9Q13242 221 aaKnown RBP eCLIP3.93□□□□□ -1.78
LINC00396-201ENST00000411690 PDE6HQ13956 83 aa3.93□□□□□ -1.78
LINC00396-201ENST00000411690 ELOBQ15370 118 aa3.93□□□□□ -1.78
LINC00396-201ENST00000411690 TMEM183BQ1AE95 376 aa3.93□□□□□ -1.78
LINC00396-201ENST00000411690 TMEM183AQ8IXX5 376 aa3.93□□□□□ -1.78
LINC00396-201ENST00000411690 TMEM252Q8N6L7 170 aa3.93□□□□□ -1.78
LINC00396-201ENST00000411690 OR10G9Q8NGN4 311 aa3.93□□□□□ -1.78
LINC00396-201ENST00000411690 CMTM2Q8TAZ6 248 aa3.93□□□□□ -1.78
LINC00396-201ENST00000411690 SCGB1C1Q8TD33 95 aa3.93□□□□□ -1.78
LINC00396-201ENST00000411690 SPACA4Q8TDM5 124 aa3.93□□□□□ -1.78
LINC00396-201ENST00000411690 SFT2D1Q8WV19 159 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms