RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 HEATR5BQ9P2D3 2071 aa2.33□□□□□ -2.04
LSM5-205ENST00000409952 DOPEY1Q5JWR5 2465 aa2.33□□□□□ -2.04
LSM5-205ENST00000409952 ASXL1Q8IXJ9 1541 aa2.33□□□□□ -2.04
LSM5-205ENST00000409952 VCANP13611 3396 aa2.33□□□□□ -2.04
LSM5-205ENST00000409952 KLF7O75840 302 aaPredicted RBP2.33□□□□□ -2.04
LSM5-205ENST00000409952 IL5P05113 134 aa2.33□□□□□ -2.04
LSM5-205ENST00000409952 PLPP5Q8NEB5 264 aa2.33□□□□□ -2.04
LSM5-205ENST00000409952 SPTSSAQ969W0 71 aa2.33□□□□□ -2.04
LSM5-205ENST00000409952 REG4Q9BYZ8 158 aa2.33□□□□□ -2.04
LSM5-205ENST00000409952 TMEM242Q9NWH2 141 aa2.33□□□□□ -2.04
LSM5-205ENST00000409952 LAMA2P24043 3122 aaKnown RBP2.33□□□□□ -2.04
LSM5-205ENST00000409952 PZPP20742 1482 aa2.33□□□□□ -2.04
LSM5-205ENST00000409952 EYSQ5T1H1 3165 aa2.32□□□□□ -2.04
LSM5-205ENST00000409952 PKD1L3Q7Z443 1732 aa2.32□□□□□ -2.04
LSM5-205ENST00000409952 TRBV6-4A0A1B0GX49 114 aa2.32□□□□□ -2.04
LSM5-205ENST00000409952 MCRIP1C9JLW8 97 aa2.32□□□□□ -2.04
LSM5-205ENST00000409952 NUPR1O60356 82 aa2.32□□□□□ -2.04
LSM5-205ENST00000409952 PIRTP0C851 137 aa2.32□□□□□ -2.04
LSM5-205ENST00000409952 RHOHQ15669 191 aa2.32□□□□□ -2.04
LSM5-205ENST00000409952 Q6AWC8 147 aa2.32□□□□□ -2.04
LSM5-205ENST00000409952 CDC42SE1Q9NRR8 79 aa2.32□□□□□ -2.04
LSM5-205ENST00000409952 RPRMQ9NS64 109 aa2.32□□□□□ -2.04
LSM5-205ENST00000409952 TMEM106BQ9NUM4 274 aa2.32□□□□□ -2.04
LSM5-205ENST00000409952 FOCADQ5VW36 1801 aa2.32□□□□□ -2.04
LSM5-205ENST00000409952 GOLGA3Q08378 1498 aa2.32□□□□□ -2.04
LSM5-205ENST00000409952 NLRP1Q9C000 1473 aa2.32□□□□□ -2.04
LSM5-205ENST00000409952 IQGAP2Q13576 1575 aa2.32□□□□□ -2.04
LSM5-205ENST00000409952 DIDO1Q9BTC0 2240 aaKnown RBP2.32□□□□□ -2.04
LSM5-205ENST00000409952 SIPA1L2Q9P2F8 1722 aaPredicted RBP2.31□□□□□ -2.04
LSM5-205ENST00000409952 NWD2Q9ULI1 1742 aa2.31□□□□□ -2.04
LSM5-205ENST00000409952 NCOR1O75376 2440 aa2.31□□□□□ -2.04
LSM5-205ENST00000409952 APOC4-APOC2K7ER74 178 aa2.31□□□□□ -2.04
LSM5-205ENST00000409952 GEMIN2O14893 280 aaKnown RBP2.31□□□□□ -2.04
LSM5-205ENST00000409952 NDUFB6O95139 128 aa2.31□□□□□ -2.04
LSM5-205ENST00000409952 APOC2P02655 101 aa2.31□□□□□ -2.04
LSM5-205ENST00000409952 PIPP12273 146 aaPredicted RBP2.31□□□□□ -2.04
LSM5-205ENST00000409952 POLR2JP52435 117 aaKnown RBP2.31□□□□□ -2.04
LSM5-205ENST00000409952 CATR1Q13166 79 aa2.31□□□□□ -2.04
LSM5-205ENST00000409952 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
LSM5-205ENST00000409952 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
LSM5-205ENST00000409952 SPANXN1Q5VSR9 72 aa2.31□□□□□ -2.04
LSM5-205ENST00000409952 MRPL54Q6P161 138 aaKnown RBP2.31□□□□□ -2.04
LSM5-205ENST00000409952 GTF2H5Q6ZYL4 71 aa2.31□□□□□ -2.04
LSM5-205ENST00000409952 DEFB123Q8N688 67 aa2.31□□□□□ -2.04
LSM5-205ENST00000409952 PPDPFLQ8WWR9 84 aa2.31□□□□□ -2.04
LSM5-205ENST00000409952 LSM10Q969L4 123 aaKnown RBP2.31□□□□□ -2.04
LSM5-205ENST00000409952 VPS8Q8N3P4 1428 aa2.31□□□□□ -2.04
LSM5-205ENST00000409952 MYOM2P54296 1465 aa2.31□□□□□ -2.04
LSM5-205ENST00000409952 PTPN13Q12923 2485 aa2.31□□□□□ -2.04
LSM5-205ENST00000409952 SPTBN5Q9NRC6 3674 aaKnown RBP2.31□□□□□ -2.04
LSM5-205ENST00000409952 MAST1Q9Y2H9 1570 aa2.31□□□□□ -2.04
LSM5-205ENST00000409952 ITPR3Q14573 2671 aa2.31□□□□□ -2.04
LSM5-205ENST00000409952 PLCH1Q4KWH8 1693 aa2.31□□□□□ -2.04
LSM5-205ENST00000409952 COL11A1P12107 1806 aaPredicted RBP2.31□□□□□ -2.04
LSM5-205ENST00000409952 MICAL3Q7RTP6 2002 aa2.3□□□□□ -2.04
LSM5-205ENST00000409952 TRAV17A0A0B4J275 112 aa2.3□□□□□ -2.04
LSM5-205ENST00000409952 TMEM218A2RU14 115 aa2.3□□□□□ -2.04
LSM5-205ENST00000409952 SNCGO76070 127 aa2.3□□□□□ -2.04
LSM5-205ENST00000409952 KRTAP10-1P60331 282 aa2.3□□□□□ -2.04
LSM5-205ENST00000409952 Q6ZS92 163 aa2.3□□□□□ -2.04
LSM5-205ENST00000409952 C8orf59Q8N0T1 100 aaPredicted RBP2.3□□□□□ -2.04
LSM5-205ENST00000409952 ACBD7Q8N6N7 88 aa2.3□□□□□ -2.04
LSM5-205ENST00000409952 MRPL57Q9BQC6 102 aaKnown RBP2.3□□□□□ -2.04
LSM5-205ENST00000409952 NDUFA12Q9UI09 145 aa2.3□□□□□ -2.04
LSM5-205ENST00000409952 KTN1Q86UP2 1357 aaKnown RBP2.3□□□□□ -2.04
LSM5-205ENST00000409952 SCAPERQ9BY12 1400 aa2.3□□□□□ -2.04
LSM5-205ENST00000409952 MYLKQ15746 1914 aa2.3□□□□□ -2.04
LSM5-205ENST00000409952 TPRP12270 2363 aaKnown RBP2.3□□□□□ -2.04
LSM5-205ENST00000409952 ABCA12Q86UK0 2595 aa2.29□□□□□ -2.04
LSM5-205ENST00000409952 MYO18BQ8IUG5 2567 aa2.29□□□□□ -2.04
LSM5-205ENST00000409952 RP1P56715 2156 aa2.29□□□□□ -2.04
LSM5-205ENST00000409952 KCPQ6ZWJ8 1503 aa2.29□□□□□ -2.04
LSM5-205ENST00000409952 TMEM30CPA0ZSE6 113 aa2.29□□□□□ -2.04
LSM5-205ENST00000409952 CCL25O15444 150 aa2.29□□□□□ -2.04
LSM5-205ENST00000409952 LINC00299Q6ZSB3 139 aa2.29□□□□□ -2.04
LSM5-205ENST00000409952 RANBP2P49792 3224 aaKnown RBP2.29□□□□□ -2.04
LSM5-205ENST00000409952 LRRC37A3O60309 1634 aa2.28□□□□□ -2.04
LSM5-205ENST00000409952 ACACBO00763 2458 aa2.28□□□□□ -2.04
LSM5-205ENST00000409952 FYCO1Q9BQS8 1478 aa2.28□□□□□ -2.04
LSM5-205ENST00000409952 ARHGAP35Q9NRY4 1499 aa2.28□□□□□ -2.04
LSM5-205ENST00000409952 TRGV2A0A075B6R0 118 aa2.28□□□□□ -2.04
LSM5-205ENST00000409952 TRAV30A0A087WSZ9 112 aa2.28□□□□□ -2.04
LSM5-205ENST00000409952 A0A0J9YY99 117 aa2.28□□□□□ -2.04
LSM5-205ENST00000409952 MRPS14O60783 128 aaKnown RBP2.28□□□□□ -2.04
LSM5-205ENST00000409952 FREM3P0C091 2139 aa2.28□□□□□ -2.04
LSM5-205ENST00000409952 IL7P13232 177 aa2.28□□□□□ -2.04
LSM5-205ENST00000409952 HSD52Q0P140 79 aa2.28□□□□□ -2.04
LSM5-205ENST00000409952 MPV17LQ2QL34 196 aa2.28□□□□□ -2.04
LSM5-205ENST00000409952 UNQ5815/PRO19632Q6UWF5 114 aa2.28□□□□□ -2.04
LSM5-205ENST00000409952 C15orf53Q8NAA6 179 aa2.28□□□□□ -2.04
LSM5-205ENST00000409952 LINC00526Q96FQ7 95 aa2.28□□□□□ -2.04
LSM5-205ENST00000409952 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
LSM5-205ENST00000409952 CENPFP49454 3210 aa2.28□□□□□ -2.04
LSM5-205ENST00000409952 CFAP47Q6ZTR5 3102 aa2.27□□□□□ -2.05
LSM5-205ENST00000409952 SLC25A6P12236 298 aa2.27□□□□□ -2.05
LSM5-205ENST00000409952 C9orf153Q5TBE3 101 aa2.27□□□□□ -2.05
LSM5-205ENST00000409952 C12orf73Q69YU5 71 aa2.27□□□□□ -2.05
LSM5-205ENST00000409952 CSAG1Q6PB30 78 aa2.27□□□□□ -2.05
LSM5-205ENST00000409952 LYPD5Q6UWN5 251 aa2.27□□□□□ -2.05
LSM5-205ENST00000409952 TMEM141Q96I45 108 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms