RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 RAB14P61106 215 aa15.41■□□□□ 0.06
PTCD3-203ENST00000409783 RHOHQ15669 191 aa15.41■□□□□ 0.06
PTCD3-203ENST00000409783 FAM74A3Q4VXF1 159 aa15.41■□□□□ 0.06
PTCD3-203ENST00000409783 MRPS16Q9Y3D3 137 aaKnown RBP15.41■□□□□ 0.06
PTCD3-203ENST00000409783 DNAH10Q8IVF4 4471 aa15.41■□□□□ 0.06
PTCD3-203ENST00000409783 SPANXN1Q5VSR9 72 aa15.4■□□□□ 0.06
PTCD3-203ENST00000409783 NEGR1Q7Z3B1 354 aa15.4■□□□□ 0.06
PTCD3-203ENST00000409783 UPK3BQ9BT76 320 aa15.4■□□□□ 0.06
PTCD3-203ENST00000409783 SRIP30626 198 aa15.39■□□□□ 0.05
PTCD3-203ENST00000409783 FAM74A4Q5TZK3 123 aa15.39■□□□□ 0.05
PTCD3-203ENST00000409783 LYPD5Q6UWN5 251 aa15.39■□□□□ 0.05
PTCD3-203ENST00000409783 LYZL1Q6UWQ5 148 aa15.39■□□□□ 0.05
PTCD3-203ENST00000409783 PRADC1Q9BSG0 188 aa15.39■□□□□ 0.05
PTCD3-203ENST00000409783 Q9UF83 564 aa15.39■□□□□ 0.05
PTCD3-203ENST00000409783 IGLV2-18A0A075B6J9 118 aa15.38■□□□□ 0.05
PTCD3-203ENST00000409783 A0A1W2PPQ1 181 aa15.38■□□□□ 0.05
PTCD3-203ENST00000409783 GATCO43716 136 aaKnown RBP15.38■□□□□ 0.05
PTCD3-203ENST00000409783 CTRLP40313 264 aa15.38■□□□□ 0.05
PTCD3-203ENST00000409783 TMEM241Q24JQ0 296 aa15.38■□□□□ 0.05
PTCD3-203ENST00000409783 Q6ZR54 194 aa15.38■□□□□ 0.05
PTCD3-203ENST00000409783 C14orf178Q8N769 122 aaPredicted RBP15.38■□□□□ 0.05
PTCD3-203ENST00000409783 TPPP3Q9BW30 176 aa15.38■□□□□ 0.05
PTCD3-203ENST00000409783 MSRB1Q9NZV6 116 aa15.38■□□□□ 0.05
PTCD3-203ENST00000409783 KIF25-AS1Q9Y6Z4 181 aa15.38■□□□□ 0.05
PTCD3-203ENST00000409783 F2Z2F3 143 aa15.37■□□□□ 0.05
PTCD3-203ENST00000409783 ERVFC1-1P60608 527 aa15.37■□□□□ 0.05
PTCD3-203ENST00000409783 SSTP61278 116 aa15.37■□□□□ 0.05
PTCD3-203ENST00000409783 RPL23P62829 140 aaKnown RBP15.37■□□□□ 0.05
PTCD3-203ENST00000409783 GTSF1Q8WW33 167 aa15.37■□□□□ 0.05
PTCD3-203ENST00000409783 OSTCQ9NRP0 149 aa15.37■□□□□ 0.05
PTCD3-203ENST00000409783 DNAH2Q9P225 4427 aa15.36■□□□□ 0.05
PTCD3-203ENST00000409783 LINC00694P0DN24 101 aa15.36■□□□□ 0.05
PTCD3-203ENST00000409783 CACNG7P62955 275 aa15.36■□□□□ 0.05
PTCD3-203ENST00000409783 ISOC2Q96AB3 205 aa15.36■□□□□ 0.05
PTCD3-203ENST00000409783 CNFNQ9BYD5 112 aa15.36■□□□□ 0.05
PTCD3-203ENST00000409783 NAT8Q9UHE5 227 aa15.36■□□□□ 0.05
PTCD3-203ENST00000409783 M0R2N4 97 aa15.35■□□□□ 0.05
PTCD3-203ENST00000409783 LINC00315P59091 139 aa15.35■□□□□ 0.05
PTCD3-203ENST00000409783 CT83Q5H943 113 aa15.35■□□□□ 0.05
PTCD3-203ENST00000409783 WDR73Q6P4I2 378 aa15.35■□□□□ 0.05
PTCD3-203ENST00000409783 Q9H8V8 135 aa15.35■□□□□ 0.05
PTCD3-203ENST00000409783 SOHLH1Q5JUK2 328 aa15.34■□□□□ 0.05
PTCD3-203ENST00000409783 SH2D6Q7Z4S9 175 aa15.34■□□□□ 0.05
PTCD3-203ENST00000409783 A8MWL6 223 aa15.33■□□□□ 0.04
PTCD3-203ENST00000409783 TIRAPP58753 221 aa15.33■□□□□ 0.04
PTCD3-203ENST00000409783 AP1S3Q96PC3 154 aa15.33■□□□□ 0.04
PTCD3-203ENST00000409783 NTF3P20783 257 aa15.32■□□□□ 0.04
PTCD3-203ENST00000409783 FOXA3P55318 350 aaPredicted RBP15.32■□□□□ 0.04
PTCD3-203ENST00000409783 RAB4BP61018 213 aa15.32■□□□□ 0.04
PTCD3-203ENST00000409783 V9GYV3 84 aa15.32■□□□□ 0.04
PTCD3-203ENST00000409783 FRAS1Q86XX4 4008 aa15.32■□□□□ 0.04
PTCD3-203ENST00000409783 NBDYA0A0U1RRE5 68 aa15.31■□□□□ 0.04
PTCD3-203ENST00000409783 GAGE12JA6NER3 117 aa15.31■□□□□ 0.04
PTCD3-203ENST00000409783 GAGE1Q13065 139 aa15.31■□□□□ 0.04
PTCD3-203ENST00000409783 GAGE4Q13068 117 aa15.31■□□□□ 0.04
PTCD3-203ENST00000409783 GAGE5Q13069 117 aa15.31■□□□□ 0.04
PTCD3-203ENST00000409783 ADIRFQ15847 76 aa15.31■□□□□ 0.04
PTCD3-203ENST00000409783 GAGE13Q4V321 117 aa15.31■□□□□ 0.04
PTCD3-203ENST00000409783 TSKUQ8WUA8 353 aa15.3■□□□□ 0.04
PTCD3-203ENST00000409783 DNAH17Q9UFH2 4485 aa15.3■□□□□ 0.04
PTCD3-203ENST00000409783 TRBV10-1A0A0K0K1A3 114 aa15.29■□□□□ 0.04
PTCD3-203ENST00000409783 EVI2AP22794 236 aa15.29■□□□□ 0.04
PTCD3-203ENST00000409783 ZNF56Q15929 161 aa15.29■□□□□ 0.04
PTCD3-203ENST00000409783 ATP6V0E2Q8NHE4 81 aa15.29■□□□□ 0.04
PTCD3-203ENST00000409783 KRTAP1-5Q9BYS1 174 aa15.29■□□□□ 0.04
PTCD3-203ENST00000409783 C15orf54Q8N8G6 183 aa15.28■□□□□ 0.04
PTCD3-203ENST00000409783 GFRA4Q9GZZ7 299 aa15.28■□□□□ 0.04
PTCD3-203ENST00000409783 FAM231BA6NCW3 169 aa15.27■□□□□ 0.04
PTCD3-203ENST00000409783 SIVA1O15304 175 aa15.27■□□□□ 0.04
PTCD3-203ENST00000409783 TRGC1P0CF51 173 aa15.27■□□□□ 0.04
PTCD3-203ENST00000409783 SMIM17P0DL12 118 aa15.27■□□□□ 0.04
PTCD3-203ENST00000409783 OR10G8Q8NGN5 311 aa15.27■□□□□ 0.04
PTCD3-203ENST00000409783 PGLYRP4Q96LB8 373 aa15.27■□□□□ 0.04
PTCD3-203ENST00000409783 GTSF1LQ9H1H1 148 aa15.27■□□□□ 0.04
PTCD3-203ENST00000409783 TWIST1Q15672 202 aa15.26■□□□□ 0.03
PTCD3-203ENST00000409783 WFDC10BQ8IUB3 73 aa15.26■□□□□ 0.03
PTCD3-203ENST00000409783 HIGD1CA8MV81 97 aa15.25■□□□□ 0.03
PTCD3-203ENST00000409783 F5H697 171 aa15.25■□□□□ 0.03
PTCD3-203ENST00000409783 NEXN-AS1Q8NBZ9 246 aa15.25■□□□□ 0.03
PTCD3-203ENST00000409783 RTL8CO15255 209 aa15.24■□□□□ 0.03
PTCD3-203ENST00000409783 UBE2D3P61077 147 aa15.24■□□□□ 0.03
PTCD3-203ENST00000409783 UBE2D2P62837 147 aa15.24■□□□□ 0.03
PTCD3-203ENST00000409783 DPH3P1Q9H4G8 78 aa15.24■□□□□ 0.03
PTCD3-203ENST00000409783 FAT2Q9NYQ8 4349 aa15.24■□□□□ 0.03
PTCD3-203ENST00000409783 EPPK1P58107 5090 aaKnown RBP15.23■□□□□ 0.03
PTCD3-203ENST00000409783 TRBV7-3A0A075B6L6 115 aa15.23■□□□□ 0.03
PTCD3-203ENST00000409783 M0QY20 66 aa15.23■□□□□ 0.03
PTCD3-203ENST00000409783 MGPP08493 103 aa15.23■□□□□ 0.03
PTCD3-203ENST00000409783 RPL36AP83881 106 aaKnown RBP15.23■□□□□ 0.03
PTCD3-203ENST00000409783 LELP1Q5T871 98 aa15.23■□□□□ 0.03
PTCD3-203ENST00000409783 SUMO4Q6EEV6 95 aa15.23■□□□□ 0.03
PTCD3-203ENST00000409783 RPL36ALQ969Q0 106 aaKnown RBP15.23■□□□□ 0.03
PTCD3-203ENST00000409783 TTC32Q5I0X7 151 aa15.22■□□□□ 0.03
PTCD3-203ENST00000409783 UQCC3Q6UW78 93 aa15.22■□□□□ 0.03
PTCD3-203ENST00000409783 DNAH10OSP0CZ25 163 aa15.21■□□□□ 0.03
PTCD3-203ENST00000409783 NUP35Q8NFH5 326 aa15.21■□□□□ 0.03
PTCD3-203ENST00000409783 A0A1B0GUT8 65 aa15.2■□□□□ 0.02
PTCD3-203ENST00000409783 SMIM27A0A1W2PRY6 76 aa15.2■□□□□ 0.02
PTCD3-203ENST00000409783 C1orf134Q5TEV5 83 aa15.2■□□□□ 0.02
PTCD3-203ENST00000409783 ADCYAP1P18509 176 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms