RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 PSMG3-AS1Q96PY0 264 aa12.86□□□□□ -0.35
PCDHA13-202ENST00000409494 DKK2Q9UBU2 259 aa12.86□□□□□ -0.35
PCDHA13-202ENST00000409494 TLN1Q9Y490 2541 aaKnown RBP12.86□□□□□ -0.35
PCDHA13-202ENST00000409494 SMIM9A6NGZ8 99 aa12.86□□□□□ -0.35
PCDHA13-202ENST00000409494 F8WEM9 126 aa12.86□□□□□ -0.35
PCDHA13-202ENST00000409494 PRR14LQ5THK1 2151 aa12.86□□□□□ -0.35
PCDHA13-202ENST00000409494 CCDC140Q96MF4 163 aa12.86□□□□□ -0.35
PCDHA13-202ENST00000409494 C11orf68Q9H3H3 251 aaKnown RBP12.85□□□□□ -0.35
PCDHA13-202ENST00000409494 TNCP24821 2201 aa12.85□□□□□ -0.35
PCDHA13-202ENST00000409494 K7EQD1 137 aa12.85□□□□□ -0.35
PCDHA13-202ENST00000409494 ANAPC13Q9BS18 74 aa12.85□□□□□ -0.35
PCDHA13-202ENST00000409494 SONP18583 2426 aaKnown RBP12.85□□□□□ -0.35
PCDHA13-202ENST00000409494 DEFB125Q8N687 156 aa12.85□□□□□ -0.35
PCDHA13-202ENST00000409494 YPEL4Q96NS1 127 aa12.85□□□□□ -0.35
PCDHA13-202ENST00000409494 MRPL36Q9P0J6 103 aaKnown RBP12.85□□□□□ -0.35
PCDHA13-202ENST00000409494 IGKV1D-37A0A075B6S9 117 aa12.84□□□□□ -0.35
PCDHA13-202ENST00000409494 GTSF1Q8WW33 167 aa12.84□□□□□ -0.35
PCDHA13-202ENST00000409494 Q6ZVH6 145 aa12.84□□□□□ -0.35
PCDHA13-202ENST00000409494 LINC00173Q6ZV60 143 aa12.84□□□□□ -0.35
PCDHA13-202ENST00000409494 A0A1W2PPM0 123 aa12.84□□□□□ -0.35
PCDHA13-202ENST00000409494 TAL2Q16559 108 aa12.83□□□□□ -0.35
PCDHA13-202ENST00000409494 TMEM263Q8WUH6 116 aaKnown RBP12.83□□□□□ -0.35
PCDHA13-202ENST00000409494 IGHV3-38A0A0C4DH36 116 aa12.83□□□□□ -0.36
PCDHA13-202ENST00000409494 TRBV10-1A0A0K0K1A3 114 aa12.83□□□□□ -0.36
PCDHA13-202ENST00000409494 CTRLP40313 264 aa12.83□□□□□ -0.36
PCDHA13-202ENST00000409494 NPC2P61916 151 aa12.83□□□□□ -0.36
PCDHA13-202ENST00000409494 LINC01545Q5VT33 79 aa12.83□□□□□ -0.36
PCDHA13-202ENST00000409494 Q6ZSV7 163 aa12.83□□□□□ -0.36
PCDHA13-202ENST00000409494 Q8N6K4 173 aa12.83□□□□□ -0.36
PCDHA13-202ENST00000409494 NDUFA12Q9UI09 145 aa12.83□□□□□ -0.36
PCDHA13-202ENST00000409494 KLK5Q9Y337 293 aaPredicted RBP12.83□□□□□ -0.36
PCDHA13-202ENST00000409494 ZNF503Q96F45 646 aa12.83□□□□□ -0.36
PCDHA13-202ENST00000409494 GAGE2BQ13066 116 aa12.82□□□□□ -0.36
PCDHA13-202ENST00000409494 GAGE2EQ4V326 116 aa12.82□□□□□ -0.36
PCDHA13-202ENST00000409494 UNQ9165/PRO28630Q6UXU0 137 aa12.82□□□□□ -0.36
PCDHA13-202ENST00000409494 NKAPP1Q8N9T2 125 aa12.82□□□□□ -0.36
PCDHA13-202ENST00000409494 GAGE2DQ9UEU5 116 aa12.82□□□□□ -0.36
PCDHA13-202ENST00000409494 C1orf43Q9BWL3 253 aa12.82□□□□□ -0.36
PCDHA13-202ENST00000409494 GATD1Q8NB37 220 aa12.82□□□□□ -0.36
PCDHA13-202ENST00000409494 K7EQG2 157 aa12.81□□□□□ -0.36
PCDHA13-202ENST00000409494 CEND1Q8N111 149 aa12.81□□□□□ -0.36
PCDHA13-202ENST00000409494 HERV-K104P63124 156 aa12.81□□□□□ -0.36
PCDHA13-202ENST00000409494 MAP6D1Q9H9H5 199 aa12.81□□□□□ -0.36
PCDHA13-202ENST00000409494 GYPEP15421 78 aa12.81□□□□□ -0.36
PCDHA13-202ENST00000409494 HILS1P60008 231 aa12.81□□□□□ -0.36
PCDHA13-202ENST00000409494 Q8N1Y9 231 aa12.81□□□□□ -0.36
PCDHA13-202ENST00000409494 MRAPQ8TCY5 172 aa12.81□□□□□ -0.36
PCDHA13-202ENST00000409494 TNRC6AQ8NDV7 1962 aaKnown RBP12.81□□□□□ -0.36
PCDHA13-202ENST00000409494 CCDC168Q8NDH2 2452 aa12.8□□□□□ -0.36
PCDHA13-202ENST00000409494 ETDBQ3ZM63 59 aa12.8□□□□□ -0.36
PCDHA13-202ENST00000409494 ZFAND6Q6FIF0 208 aa12.8□□□□□ -0.36
PCDHA13-202ENST00000409494 C2orf82Q6UX34 121 aa12.8□□□□□ -0.36
PCDHA13-202ENST00000409494 F8W1H4 67 aa12.8□□□□□ -0.36
PCDHA13-202ENST00000409494 INAFM1C9JVW0 142 aa12.8□□□□□ -0.36
PCDHA13-202ENST00000409494 CCL25O15444 150 aa12.79□□□□□ -0.36
PCDHA13-202ENST00000409494 SUMO4Q6EEV6 95 aa12.79□□□□□ -0.36
PCDHA13-202ENST00000409494 PCP2Q8IVA1 136 aa12.79□□□□□ -0.36
PCDHA13-202ENST00000409494 TRBV20-1A0A075B6N2 111 aa12.79□□□□□ -0.36
PCDHA13-202ENST00000409494 DEFB114Q30KQ6 69 aa12.79□□□□□ -0.36
PCDHA13-202ENST00000409494 VWC2LB2RUY7 222 aa12.79□□□□□ -0.36
PCDHA13-202ENST00000409494 C9JAW5 83 aa12.79□□□□□ -0.36
PCDHA13-202ENST00000409494 PRAC2D3DTV9 90 aa12.79□□□□□ -0.36
PCDHA13-202ENST00000409494 TRBV7-3A0A075B6L6 115 aa12.78□□□□□ -0.36
PCDHA13-202ENST00000409494 TM2D2Q9BX73 214 aa12.78□□□□□ -0.36
PCDHA13-202ENST00000409494 LY6G6DO95868 133 aa12.78□□□□□ -0.36
PCDHA13-202ENST00000409494 A0A0J9YY99 117 aa12.78□□□□□ -0.36
PCDHA13-202ENST00000409494 J3QQQ9 107 aa12.78□□□□□ -0.36
PCDHA13-202ENST00000409494 TRBV12-3P01733 135 aa12.78□□□□□ -0.36
PCDHA13-202ENST00000409494 ANKRD39Q53RE8 183 aa12.78□□□□□ -0.36
PCDHA13-202ENST00000409494 SCRT2Q9NQ03 307 aa12.78□□□□□ -0.36
PCDHA13-202ENST00000409494 GOLGB1Q14789 3259 aaKnown RBP12.77□□□□□ -0.36
PCDHA13-202ENST00000409494 PRO0255Q9UI72 69 aa12.77□□□□□ -0.36
PCDHA13-202ENST00000409494 GATA1P15976 413 aaPredicted RBP12.77□□□□□ -0.37
PCDHA13-202ENST00000409494 CRLF1O75462 422 aa12.77□□□□□ -0.37
PCDHA13-202ENST00000409494 IGLV2-8P01709 118 aa12.77□□□□□ -0.37
PCDHA13-202ENST00000409494 TRAV13-2A0A0B4J235 113 aa12.77□□□□□ -0.37
PCDHA13-202ENST00000409494 C19orf71A6NCJ1 209 aa12.77□□□□□ -0.37
PCDHA13-202ENST00000409494 K7ERJ3 54 aa12.77□□□□□ -0.37
PCDHA13-202ENST00000409494 HHLA3Q9XRX5 114 aa12.77□□□□□ -0.37
PCDHA13-202ENST00000409494 MSRB1Q9NZV6 116 aa12.76□□□□□ -0.37
PCDHA13-202ENST00000409494 SLC25A29Q8N8R3 303 aa12.76□□□□□ -0.37
PCDHA13-202ENST00000409494 TRAV4A0A0B4J268 109 aa12.76□□□□□ -0.37
PCDHA13-202ENST00000409494 PRSS29PA6NIE9 313 aa12.76□□□□□ -0.37
PCDHA13-202ENST00000409494 LINC01548A6NM66 108 aa12.76□□□□□ -0.37
PCDHA13-202ENST00000409494 UTF1Q5T230 341 aa12.76□□□□□ -0.37
PCDHA13-202ENST00000409494 LAMTOR3Q9UHA4 124 aa12.76□□□□□ -0.37
PCDHA13-202ENST00000409494 LYRM9A8MSI8 78 aa12.75□□□□□ -0.37
PCDHA13-202ENST00000409494 SPINK8P0C7L1 97 aa12.75□□□□□ -0.37
PCDHA13-202ENST00000409494 NDUFA7O95182 113 aa12.75□□□□□ -0.37
PCDHA13-202ENST00000409494 IGKV2D-24A0A075B6R9 120 aa12.75□□□□□ -0.37
PCDHA13-202ENST00000409494 PRSS47A8MTI9 375 aa12.75□□□□□ -0.37
PCDHA13-202ENST00000409494 PSMB8P28062 276 aa12.75□□□□□ -0.37
PCDHA13-202ENST00000409494 H3BMM0 161 aa12.74□□□□□ -0.37
PCDHA13-202ENST00000409494 C12orf74Q32Q52 190 aa12.74□□□□□ -0.37
PCDHA13-202ENST00000409494 UBE2WQ96B02 151 aa12.74□□□□□ -0.37
PCDHA13-202ENST00000409494 DEFB135Q30KP9 77 aa12.74□□□□□ -0.37
PCDHA13-202ENST00000409494 ZFP2Q6ZN57 461 aa12.74□□□□□ -0.37
PCDHA13-202ENST00000409494 C1orf229Q6ZS94 237 aaPredicted RBP12.74□□□□□ -0.37
PCDHA13-202ENST00000409494 A0A1B0GXF2 115 aa12.73□□□□□ -0.37
PCDHA13-202ENST00000409494 H3BMG7 143 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms