RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 SETXQ7Z333 2677 aaKnown RBP10.18□□□□□ -0.78
COL6A2-204ENST00000409416 OOSP1A8MZH6 123 aa10.18□□□□□ -0.78
COL6A2-204ENST00000409416 HOXA3O43365 443 aaPredicted RBP10.18□□□□□ -0.78
COL6A2-204ENST00000409416 LAGE3Q14657 143 aa10.18□□□□□ -0.78
COL6A2-204ENST00000409416 TMEM170BQ5T4T1 132 aa10.18□□□□□ -0.78
COL6A2-204ENST00000409416 HIST1H4GQ99525 98 aa10.18□□□□□ -0.78
COL6A2-204ENST00000409416 WFDC2Q14508 124 aa10.18□□□□□ -0.78
COL6A2-204ENST00000409416 ANAPC13Q9BS18 74 aa10.18□□□□□ -0.78
COL6A2-204ENST00000409416 TRAV8-2A0A0B4J237 113 aa10.17□□□□□ -0.78
COL6A2-204ENST00000409416 CLPSL1A2RUU4 121 aa10.17□□□□□ -0.78
COL6A2-204ENST00000409416 SPINK8P0C7L1 97 aa10.17□□□□□ -0.78
COL6A2-204ENST00000409416 LINC01559Q495D7 138 aa10.17□□□□□ -0.78
COL6A2-204ENST00000409416 AMTNQ6UX39 209 aa10.17□□□□□ -0.78
COL6A2-204ENST00000409416 A0A1B0GWB2 263 aa10.17□□□□□ -0.78
COL6A2-204ENST00000409416 GATA3P23771 443 aa10.17□□□□□ -0.78
COL6A2-204ENST00000409416 SLURP1P55000 103 aa10.17□□□□□ -0.78
COL6A2-204ENST00000409416 SRSF1Q07955 248 aaKnown RBP eCLIP10.17□□□□□ -0.78
COL6A2-204ENST00000409416 Q8N8P6 123 aa10.17□□□□□ -0.78
COL6A2-204ENST00000409416 DYNLRB2Q8TF09 96 aa10.17□□□□□ -0.78
COL6A2-204ENST00000409416 BBC3Q96PG8 261 aaPredicted RBP10.17□□□□□ -0.78
COL6A2-204ENST00000409416 IGHV3-38A0A0C4DH36 116 aa10.17□□□□□ -0.78
COL6A2-204ENST00000409416 SRSF9Q13242 221 aaKnown RBP eCLIP10.17□□□□□ -0.78
COL6A2-204ENST00000409416 Q96MF0 132 aa10.17□□□□□ -0.78
COL6A2-204ENST00000409416 TRBV25-1A0A075B6N4 114 aa10.16□□□□□ -0.78
COL6A2-204ENST00000409416 B4DSR2 109 aa10.16□□□□□ -0.78
COL6A2-204ENST00000409416 APOMO95445 188 aa10.16□□□□□ -0.78
COL6A2-204ENST00000409416 APRG1Q8IVJ8 170 aa10.16□□□□□ -0.78
COL6A2-204ENST00000409416 MRAP2Q96G30 205 aa10.16□□□□□ -0.78
COL6A2-204ENST00000409416 ATP5LO75964 103 aa10.16□□□□□ -0.78
COL6A2-204ENST00000409416 PHLDA1Q8WV24 401 aaPredicted RBP10.16□□□□□ -0.78
COL6A2-204ENST00000409416 OPRPNQ99935 248 aaPredicted RBP10.16□□□□□ -0.78
COL6A2-204ENST00000409416 CYSLTR1Q9Y271 337 aa10.16□□□□□ -0.78
COL6A2-204ENST00000409416 A0A1W2PPM0 123 aa10.16□□□□□ -0.78
COL6A2-204ENST00000409416 DEFB131AP59861 70 aa10.15□□□□□ -0.78
COL6A2-204ENST00000409416 C10orf105Q8TEF2 133 aa10.15□□□□□ -0.78
COL6A2-204ENST00000409416 TRBV7-1A0A0A6YYK4 115 aa10.15□□□□□ -0.78
COL6A2-204ENST00000409416 CFHR3Q02985 330 aa10.15□□□□□ -0.78
COL6A2-204ENST00000409416 RNF183Q96D59 192 aa10.15□□□□□ -0.78
COL6A2-204ENST00000409416 ADARB2-AS1A8MUL3 147 aa10.14□□□□□ -0.79
COL6A2-204ENST00000409416 ZNF575Q86XF7 245 aa10.14□□□□□ -0.79
COL6A2-204ENST00000409416 MAPKAPK5-AS1Q8N8E1 139 aa10.14□□□□□ -0.79
COL6A2-204ENST00000409416 OR5A1Q8NGJ0 315 aa10.14□□□□□ -0.79
COL6A2-204ENST00000409416 LOC107984156A0A0G2JMH3 177 aa10.14□□□□□ -0.79
COL6A2-204ENST00000409416 RPL39P62891 51 aaKnown RBP10.14□□□□□ -0.79
COL6A2-204ENST00000409416 EBI3Q14213 229 aa10.14□□□□□ -0.79
COL6A2-204ENST00000409416 ARL17AQ8IVW1 177 aa10.14□□□□□ -0.79
COL6A2-204ENST00000409416 APCP25054 2843 aa10.14□□□□□ -0.79
COL6A2-204ENST00000409416 H3BMG7 143 aa10.13□□□□□ -0.79
COL6A2-204ENST00000409416 IGHV7-4-1A0A0J9YVY3 117 aa10.13□□□□□ -0.79
COL6A2-204ENST00000409416 DAZ1Q9NQZ3 744 aaKnown RBP10.13□□□□□ -0.79
COL6A2-204ENST00000409416 XCL2Q9UBD3 114 aa10.13□□□□□ -0.79
COL6A2-204ENST00000409416 HHLA3Q9XRX5 114 aa10.13□□□□□ -0.79
COL6A2-204ENST00000409416 TMEM190Q8WZ59 177 aa10.13□□□□□ -0.79
COL6A2-204ENST00000409416 MAST4O15021 2626 aa10.12□□□□□ -0.79
COL6A2-204ENST00000409416 TRAV21A0A0B4J279 112 aa10.12□□□□□ -0.79
COL6A2-204ENST00000409416 OR11H12B2RN74 326 aa10.12□□□□□ -0.79
COL6A2-204ENST00000409416 P0DMU3 169 aa10.12□□□□□ -0.79
COL6A2-204ENST00000409416 FAM231AP0DMU4 169 aa10.12□□□□□ -0.79
COL6A2-204ENST00000409416 FAM231CP0DMU5 169 aa10.12□□□□□ -0.79
COL6A2-204ENST00000409416 KLHL30-AS1Q8NEE0 82 aa10.12□□□□□ -0.79
COL6A2-204ENST00000409416 OR11H1Q8NG94 326 aa10.12□□□□□ -0.79
COL6A2-204ENST00000409416 OR11H2Q8NH07 326 aa10.12□□□□□ -0.79
COL6A2-204ENST00000409416 MDFICQ9P1T7 246 aa10.12□□□□□ -0.79
COL6A2-204ENST00000409416 PRSS2P07478 247 aa10.12□□□□□ -0.79
COL6A2-204ENST00000409416 F8P00451 2351 aa10.11□□□□□ -0.79
COL6A2-204ENST00000409416 ID1P41134 155 aa10.11□□□□□ -0.79
COL6A2-204ENST00000409416 SMIM2Q9BVW6 85 aa10.11□□□□□ -0.79
COL6A2-204ENST00000409416 INSL3P51460 131 aa10.11□□□□□ -0.79
COL6A2-204ENST00000409416 NRACQ8N912 160 aa10.11□□□□□ -0.79
COL6A2-204ENST00000409416 ZNF418Q8TF45 676 aaPredicted RBP10.11□□□□□ -0.79
COL6A2-204ENST00000409416 IGHV4OR15-8A0A075B7B6 117 aa10.1□□□□□ -0.79
COL6A2-204ENST00000409416 A0A087WW49 117 aa10.1□□□□□ -0.79
COL6A2-204ENST00000409416 RBAKDNA6NC62 111 aa10.1□□□□□ -0.79
COL6A2-204ENST00000409416 SUMO2P61956 95 aaKnown RBP10.1□□□□□ -0.79
COL6A2-204ENST00000409416 NSUN5P1Q3KNT7 163 aa10.1□□□□□ -0.79
COL6A2-204ENST00000409416 C3orf56Q8N813 242 aa10.1□□□□□ -0.79
COL6A2-204ENST00000409416 SYT8Q8NBV8 401 aa10.1□□□□□ -0.79
COL6A2-204ENST00000409416 C20orf78Q9BR46 151 aa10.1□□□□□ -0.79
COL6A2-204ENST00000409416 PRORYQ9H606 182 aa10.1□□□□□ -0.79
COL6A2-204ENST00000409416 MGAM2Q2M2H8 2515 aa10.1□□□□□ -0.79
COL6A2-204ENST00000409416 SIVA1O15304 175 aa10.1□□□□□ -0.79
COL6A2-204ENST00000409416 SNRPD3P62318 126 aaKnown RBP10.1□□□□□ -0.79
COL6A2-204ENST00000409416 TCTEX1D4Q5JR98 221 aa10.1□□□□□ -0.79
COL6A2-204ENST00000409416 C9orf139Q6ZV77 190 aa10.1□□□□□ -0.79
COL6A2-204ENST00000409416 CEND1Q8N111 149 aa10.1□□□□□ -0.79
COL6A2-204ENST00000409416 PIFOQ8TCI5 191 aa10.1□□□□□ -0.79
COL6A2-204ENST00000409416 ZNF479Q96JC4 524 aa10.1□□□□□ -0.79
COL6A2-204ENST00000409416 NOTCH1P46531 2555 aa10.1□□□□□ -0.79
COL6A2-204ENST00000409416 ZNF876PQ49A33 203 aa10.1□□□□□ -0.79
COL6A2-204ENST00000409416 CEMP1Q6PRD7 247 aaPredicted RBP10.1□□□□□ -0.79
COL6A2-204ENST00000409416 COX8CQ7Z4L0 72 aa10.1□□□□□ -0.79
COL6A2-204ENST00000409416 SPAG8Q99932 426 aaPredicted RBP10.1□□□□□ -0.79
COL6A2-204ENST00000409416 MRPL16Q9NX20 251 aaKnown RBP10.1□□□□□ -0.79
COL6A2-204ENST00000409416 PROK1P58294 105 aa10.09□□□□□ -0.79
COL6A2-204ENST00000409416 CNFNQ9BYD5 112 aa10.09□□□□□ -0.79
COL6A2-204ENST00000409416 A0A087WX48 190 aa10.09□□□□□ -0.79
COL6A2-204ENST00000409416 SCGB1A1P11684 91 aa10.09□□□□□ -0.79
COL6A2-204ENST00000409416 C2orf66Q6UXQ4 117 aa10.09□□□□□ -0.79
COL6A2-204ENST00000409416 C9orf47Q6ZRZ4 202 aa10.09□□□□□ -0.79
COL6A2-204ENST00000409416 LINC01587Q99440 93 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 98.6 ms