RNA–Protein interactions for RNA: ENST00000402989.5

SMC6-203, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMC6, Length 3,729 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-203ENST00000402989 GCN1Q92616 2671 aaKnown RBP3.27□□□□□ -1.89
SMC6-203ENST00000402989 GAGE12BA1L429 117 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 NDUFS8O00217 210 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 SOCS3O14543 225 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 PF4P02776 101 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 RPL24P83731 157 aaKnown RBP3.27□□□□□ -1.89
SMC6-203ENST00000402989 C19orf54Q5BKX5 351 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 RNASE13Q5GAN3 156 aaKnown RBP3.27□□□□□ -1.89
SMC6-203ENST00000402989 LINC01356Q8N9X3 169 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 TP53TG1Q9Y2A0 90 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 SPCS1Q9Y6A9 102 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 IGLV2-18A0A075B6J9 118 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 OR11H12B2RN74 326 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 HOXD3P31249 432 aaPredicted RBP3.27□□□□□ -1.89
SMC6-203ENST00000402989 SNRPD3P62318 126 aaKnown RBP3.27□□□□□ -1.89
SMC6-203ENST00000402989 TMEM170BQ5T4T1 132 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 SUMO4Q6EEV6 95 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 KLHL30-AS1Q8NEE0 82 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 OR11H1Q8NG94 326 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 OR1N2Q8NGR9 330 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 OR11H2Q8NH07 326 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 MRPL53Q96EL3 112 aaKnown RBP3.27□□□□□ -1.89
SMC6-203ENST00000402989 CST9LQ9H4G1 147 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 HHLA3Q9XRX5 114 aa3.27□□□□□ -1.89
SMC6-203ENST00000402989 UBR5O95071 2799 aaPredicted RBP3.26□□□□□ -1.89
SMC6-203ENST00000402989 SETXQ7Z333 2677 aaKnown RBP3.26□□□□□ -1.89
SMC6-203ENST00000402989 P0DMU3 169 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 FAM231AP0DMU4 169 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 FAM231CP0DMU5 169 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 RIPPLY3P57055 190 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 DEFB131AP59861 70 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 SEC11AP67812 179 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 Q8N1Y9 231 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 OR9G4Q8NGQ1 327 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 CBY1Q9Y3M2 126 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 A0A087WX48 190 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 PRSS29PA6NIE9 313 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 MAST4O15021 2626 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 IGLV1-40P01703 118 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 SMIM13P0DJ93 91 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 SRSF9Q13242 221 aaKnown RBP eCLIP3.26□□□□□ -1.89
SMC6-203ENST00000402989 TCTEX1D4Q5JR98 221 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 Q5PR19 223 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 AMTNQ6UX39 209 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 ADAMTSL5Q6ZMM2 481 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 APRG1Q8IVJ8 170 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 MRAP2Q96G30 205 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 Q96MF0 132 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 IGHV3-16A0A0C4DH30 117 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 SDHAF1A6NFY7 115 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 C9orf118A6NHY6 69 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 ZNF815PA8K554 130 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 H7C1H1 209 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 APOMO95445 188 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 FABP2P12104 132 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 SLC25A16P16260 332 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 PROK1P58294 105 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 SRSF2Q01130 221 aaKnown RBP3.26□□□□□ -1.89
SMC6-203ENST00000402989 ZNF876PQ49A33 203 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 ORMDL2Q53FV1 153 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 SAMD5Q5TGI4 173 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 DCANP1Q8TF63 244 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 PSMG3-AS1Q96PY0 264 aa3.26□□□□□ -1.89
SMC6-203ENST00000402989 H7C2G1 150 aa3.25□□□□□ -1.89
SMC6-203ENST00000402989 PSMB8P28062 276 aa3.25□□□□□ -1.89
SMC6-203ENST00000402989 GTF2H5Q6ZYL4 71 aa3.25□□□□□ -1.89
SMC6-203ENST00000402989 DYNLRB2Q8TF09 96 aa3.25□□□□□ -1.89
SMC6-203ENST00000402989 BAALCQ8WXS3 180 aa3.25□□□□□ -1.89
SMC6-203ENST00000402989 KIR2DL4Q99706 377 aa3.25□□□□□ -1.89
SMC6-203ENST00000402989 PRADC1Q9BSG0 188 aa3.25□□□□□ -1.89
SMC6-203ENST00000402989 IGHV3-38A0A0C4DH36 116 aa3.25□□□□□ -1.89
SMC6-203ENST00000402989 F8VRH5 84 aa3.25□□□□□ -1.89
SMC6-203ENST00000402989 VPREB3Q9UKI3 123 aa3.25□□□□□ -1.89
SMC6-203ENST00000402989 H3BRM9 83 aa3.24□□□□□ -1.89
SMC6-203ENST00000402989 OCIAD2Q56VL3 154 aa3.24□□□□□ -1.89
SMC6-203ENST00000402989 CEMP1Q6PRD7 247 aaPredicted RBP3.24□□□□□ -1.89
SMC6-203ENST00000402989 PHLDA1Q8WV24 401 aaPredicted RBP3.24□□□□□ -1.89
SMC6-203ENST00000402989 PLEKHB2Q96CS7 222 aa3.24□□□□□ -1.89
SMC6-203ENST00000402989 UBE2E2Q96LR5 201 aa3.24□□□□□ -1.89
SMC6-203ENST00000402989 LENEPQ9Y5L5 61 aa3.24□□□□□ -1.89
SMC6-203ENST00000402989 LOC107984156A0A0G2JMH3 177 aa3.24□□□□□ -1.89
SMC6-203ENST00000402989 A0A0J9YX75 114 aa3.24□□□□□ -1.89
SMC6-203ENST00000402989 A0A1W2PPM0 123 aa3.24□□□□□ -1.89
SMC6-203ENST00000402989 C11orf86A6NJI1 115 aa3.24□□□□□ -1.89
SMC6-203ENST00000402989 ADARB2-AS1A8MUL3 147 aa3.24□□□□□ -1.89
SMC6-203ENST00000402989 H3BUA1 57 aa3.24□□□□□ -1.89
SMC6-203ENST00000402989 HLA-DRB4P13762 266 aa3.24□□□□□ -1.89
SMC6-203ENST00000402989 PLNP26678 52 aa3.24□□□□□ -1.89
SMC6-203ENST00000402989 CDKN1BP46527 198 aa3.24□□□□□ -1.89
SMC6-203ENST00000402989 RBX1P62877 108 aa3.24□□□□□ -1.89
SMC6-203ENST00000402989 ARL17AQ8IVW1 177 aa3.24□□□□□ -1.89
SMC6-203ENST00000402989 HLA-DRB4X5D2U9 266 aa3.24□□□□□ -1.89
SMC6-203ENST00000402989 ZNF469Q96JG9 3925 aaPredicted RBP3.24□□□□□ -1.89
SMC6-203ENST00000402989 IGHV1OR15-1A0A075B7D0 117 aa3.24□□□□□ -1.89
SMC6-203ENST00000402989 A4D1N5 150 aa3.24□□□□□ -1.89
SMC6-203ENST00000402989 IGHV3-53P01767 116 aa3.24□□□□□ -1.89
SMC6-203ENST00000402989 LGALS1P09382 135 aaKnown RBP3.24□□□□□ -1.89
SMC6-203ENST00000402989 IGHV4-31P0DP07 118 aa3.24□□□□□ -1.89
SMC6-203ENST00000402989 CRIP2P52943 208 aaPredicted RBP3.24□□□□□ -1.89
SMC6-203ENST00000402989 ZFP2Q6ZN57 461 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms