RNA–Protein interactions for RNA: ENST00000400259.5

CDC42-203, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CDC42, Length 2,274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-203ENST00000400259 TRAV12-2A0A075B6T6 113 aa11.66□□□□□ -0.54
CDC42-203ENST00000400259 IGHV1OR15-1A0A075B7D0 117 aa11.66□□□□□ -0.54
CDC42-203ENST00000400259 IGKV3-20P01619 116 aa11.66□□□□□ -0.54
CDC42-203ENST00000400259 SPINK13Q1W4C9 94 aa11.66□□□□□ -0.54
CDC42-203ENST00000400259 KLHL30-AS1Q8NEE0 82 aa11.65□□□□□ -0.54
CDC42-203ENST00000400259 PRSS1P07477 247 aa11.65□□□□□ -0.55
CDC42-203ENST00000400259 RIPPLY3P57055 190 aa11.65□□□□□ -0.55
CDC42-203ENST00000400259 Q8N1Y9 231 aa11.65□□□□□ -0.55
CDC42-203ENST00000400259 FOXC2Q99958 501 aa11.65□□□□□ -0.55
CDC42-203ENST00000400259 HLA-DRB4P13762 266 aa11.64□□□□□ -0.55
CDC42-203ENST00000400259 DLX4Q92988 240 aaPredicted RBP11.64□□□□□ -0.55
CDC42-203ENST00000400259 HLA-DRB4X5D2U9 266 aa11.64□□□□□ -0.55
CDC42-203ENST00000400259 TLN2Q9Y4G6 2542 aa11.64□□□□□ -0.55
CDC42-203ENST00000400259 PDZD2O15018 2839 aa11.64□□□□□ -0.55
CDC42-203ENST00000400259 SORL1Q92673 2214 aa11.64□□□□□ -0.55
CDC42-203ENST00000400259 CHD6Q8TD26 2715 aa11.63□□□□□ -0.55
CDC42-203ENST00000400259 A0A1B0GV72 72 aa11.63□□□□□ -0.55
CDC42-203ENST00000400259 KHDC1LQ5JSQ8 128 aa11.63□□□□□ -0.55
CDC42-203ENST00000400259 C12orf54Q6X4T0 127 aa11.63□□□□□ -0.55
CDC42-203ENST00000400259 BOD1L2Q8IYS8 172 aa11.63□□□□□ -0.55
CDC42-203ENST00000400259 TMEM61Q8N0U2 210 aa11.63□□□□□ -0.55
CDC42-203ENST00000400259 ESM1Q9NQ30 184 aa11.63□□□□□ -0.55
CDC42-203ENST00000400259 MYO9AB2RTY4 2548 aa11.63□□□□□ -0.55
CDC42-203ENST00000400259 FLNAP21333 2647 aaKnown RBP11.63□□□□□ -0.55
CDC42-203ENST00000400259 ZNF469Q96JG9 3925 aaPredicted RBP11.63□□□□□ -0.55
CDC42-203ENST00000400259 GAGE12BA1L429 117 aa11.63□□□□□ -0.55
CDC42-203ENST00000400259 SYT8Q8NBV8 401 aa11.63□□□□□ -0.55
CDC42-203ENST00000400259 TOMM6Q96B49 74 aa11.63□□□□□ -0.55
CDC42-203ENST00000400259 MDFICQ9P1T7 246 aa11.63□□□□□ -0.55
CDC42-203ENST00000400259 HHLA3Q9XRX5 114 aa11.63□□□□□ -0.55
CDC42-203ENST00000400259 DEFB131AP59861 70 aa11.62□□□□□ -0.55
CDC42-203ENST00000400259 SCGB2A2Q13296 93 aa11.62□□□□□ -0.55
CDC42-203ENST00000400259 DUX3Q96PT4 197 aa11.62□□□□□ -0.55
CDC42-203ENST00000400259 G3V4G9 280 aa11.62□□□□□ -0.55
CDC42-203ENST00000400259 H3BMM0 161 aa11.62□□□□□ -0.55
CDC42-203ENST00000400259 TAX1BP3O14907 124 aa11.62□□□□□ -0.55
CDC42-203ENST00000400259 IGKCP01834 107 aa11.62□□□□□ -0.55
CDC42-203ENST00000400259 SUMO4Q6EEV6 95 aa11.62□□□□□ -0.55
CDC42-203ENST00000400259 JPT2Q9H910 190 aa11.62□□□□□ -0.55
CDC42-203ENST00000400259 TRGV11A0A075B6L2 103 aa11.61□□□□□ -0.55
CDC42-203ENST00000400259 DPM2O94777 84 aa11.61□□□□□ -0.55
CDC42-203ENST00000400259 DEFB114Q30KQ6 69 aa11.61□□□□□ -0.55
CDC42-203ENST00000400259 A0A087WX48 190 aa11.61□□□□□ -0.55
CDC42-203ENST00000400259 TRAV12-1A0A0B4J245 112 aa11.61□□□□□ -0.55
CDC42-203ENST00000400259 KNCNA6PVL3 124 aa11.61□□□□□ -0.55
CDC42-203ENST00000400259 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.61□□□□□ -0.55
CDC42-203ENST00000400259 FHL3Q13643 280 aa11.61□□□□□ -0.55
CDC42-203ENST00000400259 PCP2Q8IVA1 136 aa11.61□□□□□ -0.55
CDC42-203ENST00000400259 DYNLRB2Q8TF09 96 aa11.61□□□□□ -0.55
CDC42-203ENST00000400259 NBPF19A0A087WUL8 3843 aa11.6□□□□□ -0.55
CDC42-203ENST00000400259 SIVA1O15304 175 aa11.6□□□□□ -0.55
CDC42-203ENST00000400259 POLR2KP53803 58 aaKnown RBP11.6□□□□□ -0.55
CDC42-203ENST00000400259 TRBV6-5A0A0K0K1A5 114 aa11.6□□□□□ -0.55
CDC42-203ENST00000400259 A0A087WWL8 130 aa11.59□□□□□ -0.55
CDC42-203ENST00000400259 RBMY1A1P0DJD3 496 aaKnown RBP11.59□□□□□ -0.55
CDC42-203ENST00000400259 RBMY1CP0DJD4 496 aa11.59□□□□□ -0.55
CDC42-203ENST00000400259 RBMY1FQ15415 496 aaKnown RBP11.59□□□□□ -0.55
CDC42-203ENST00000400259 RAX2Q96IS3 184 aa11.59□□□□□ -0.55
CDC42-203ENST00000400259 MAP6D1Q9H9H5 199 aa11.59□□□□□ -0.55
CDC42-203ENST00000400259 SONP18583 2426 aaKnown RBP11.59□□□□□ -0.55
CDC42-203ENST00000400259 RBMY1BA6NDE4 496 aaKnown RBP11.58□□□□□ -0.55
CDC42-203ENST00000400259 RBMY1EA6NEQ0 496 aaKnown RBP11.58□□□□□ -0.55
CDC42-203ENST00000400259 CRYGDP07320 174 aa11.58□□□□□ -0.55
CDC42-203ENST00000400259 RBMY1DP0C7P1 496 aaKnown RBP11.58□□□□□ -0.55
CDC42-203ENST00000400259 SCGB3A1Q96QR1 104 aa11.58□□□□□ -0.55
CDC42-203ENST00000400259 SPAG8Q99932 426 aaPredicted RBP11.58□□□□□ -0.55
CDC42-203ENST00000400259 TTTY13Q9BZ97 58 aa11.58□□□□□ -0.55
CDC42-203ENST00000400259 C16orf95Q9H693 158 aa11.58□□□□□ -0.55
CDC42-203ENST00000400259 YAE1D1Q9NRH1 226 aa11.58□□□□□ -0.55
CDC42-203ENST00000400259 MRPL35Q9NZE8 188 aaKnown RBP11.58□□□□□ -0.55
CDC42-203ENST00000400259 ZNF256Q9Y2P7 627 aaPredicted RBP11.58□□□□□ -0.55
CDC42-203ENST00000400259 IGKV2D-26A0A0A0MRZ7 120 aa11.58□□□□□ -0.56
CDC42-203ENST00000400259 LINC01549A6NIU2 74 aa11.58□□□□□ -0.56
CDC42-203ENST00000400259 RNASE1P07998 156 aaKnown RBP11.58□□□□□ -0.56
CDC42-203ENST00000400259 AMMECR1LQ6DCA0 310 aa11.58□□□□□ -0.56
CDC42-203ENST00000400259 C2orf66Q6UXQ4 117 aa11.58□□□□□ -0.56
CDC42-203ENST00000400259 CCDC168Q8NDH2 2452 aa11.58□□□□□ -0.56
CDC42-203ENST00000400259 TRAV25A0A0B4J276 109 aa11.57□□□□□ -0.56
CDC42-203ENST00000400259 NMUP48645 174 aa11.57□□□□□ -0.56
CDC42-203ENST00000400259 VCYO14598 125 aa11.57□□□□□ -0.56
CDC42-203ENST00000400259 PLNP26678 52 aa11.57□□□□□ -0.56
CDC42-203ENST00000400259 NEXN-AS1Q8NBZ9 246 aa11.57□□□□□ -0.56
CDC42-203ENST00000400259 F5H697 171 aa11.56□□□□□ -0.56
CDC42-203ENST00000400259 CD300EQ496F6 205 aaPredicted RBP11.56□□□□□ -0.56
CDC42-203ENST00000400259 AKAP9Q99996 3911 aa11.56□□□□□ -0.56
CDC42-203ENST00000400259 TRBV27A0A0K0K1C4 114 aa11.56□□□□□ -0.56
CDC42-203ENST00000400259 F8VRH5 84 aa11.56□□□□□ -0.56
CDC42-203ENST00000400259 H7C1H1 209 aa11.56□□□□□ -0.56
CDC42-203ENST00000400259 M0QY20 66 aa11.56□□□□□ -0.56
CDC42-203ENST00000400259 SAP30O75446 220 aa11.56□□□□□ -0.56
CDC42-203ENST00000400259 TMEM97Q5BJF2 176 aa11.56□□□□□ -0.56
CDC42-203ENST00000400259 LINC00467Q9BRT7 94 aa11.56□□□□□ -0.56
CDC42-203ENST00000400259 CD28P10747 220 aa11.55□□□□□ -0.56
CDC42-203ENST00000400259 ZNF876PQ49A33 203 aa11.55□□□□□ -0.56
CDC42-203ENST00000400259 ZC2HC1BQ5TFG8 222 aa11.55□□□□□ -0.56
CDC42-203ENST00000400259 CCL24O00175 119 aa11.55□□□□□ -0.56
CDC42-203ENST00000400259 PIK3CD-AS1Q5SR53 167 aa11.55□□□□□ -0.56
CDC42-203ENST00000400259 FAM74A4Q5TZK3 123 aa11.55□□□□□ -0.56
CDC42-203ENST00000400259 HIST2H2BDQ6DRA6 164 aa11.55□□□□□ -0.56
CDC42-203ENST00000400259 JMJD8Q96S16 334 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms