RNA–Protein interactions for RNA: ENST00000400075.3

GABPA-202, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPA, Length 4,814 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-202ENST00000400075 A8MWP6 167 aa10.97□□□□□ -0.65
GABPA-202ENST00000400075 PRAC2D3DTV9 90 aa10.97□□□□□ -0.65
GABPA-202ENST00000400075 HIST2H2BDQ6DRA6 164 aa10.97□□□□□ -0.65
GABPA-202ENST00000400075 MAST4O15021 2626 aa10.97□□□□□ -0.65
GABPA-202ENST00000400075 IGLV10-54A0A075B6I4 117 aa10.97□□□□□ -0.65
GABPA-202ENST00000400075 IL15RAQ13261 267 aa10.96□□□□□ -0.65
GABPA-202ENST00000400075 SFTA2Q6UW10 78 aa10.96□□□□□ -0.65
GABPA-202ENST00000400075 LTAP01374 205 aa10.96□□□□□ -0.65
GABPA-202ENST00000400075 FAM222AQ5U5X8 452 aa10.96□□□□□ -0.65
GABPA-202ENST00000400075 DNAJC30Q96LL9 226 aa10.96□□□□□ -0.65
GABPA-202ENST00000400075 C20orf78Q9BR46 151 aa10.96□□□□□ -0.66
GABPA-202ENST00000400075 NHP2Q9NX24 153 aaKnown RBP10.96□□□□□ -0.66
GABPA-202ENST00000400075 CXCL1P09341 107 aa10.95□□□□□ -0.66
GABPA-202ENST00000400075 C9orf47Q6ZRZ4 202 aa10.95□□□□□ -0.66
GABPA-202ENST00000400075 HIST1H2BKO60814 126 aa10.95□□□□□ -0.66
GABPA-202ENST00000400075 HIST1H2BJP06899 126 aa10.95□□□□□ -0.66
GABPA-202ENST00000400075 HIST1H2BOP23527 126 aa10.95□□□□□ -0.66
GABPA-202ENST00000400075 HIST1H2BBP33778 126 aa10.95□□□□□ -0.66
GABPA-202ENST00000400075 HIST1H2BDP58876 126 aa10.95□□□□□ -0.66
GABPA-202ENST00000400075 HIST1H2BCP62807 126 aa10.95□□□□□ -0.66
GABPA-202ENST00000400075 HIST2H2BEQ16778 126 aa10.95□□□□□ -0.66
GABPA-202ENST00000400075 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.95□□□□□ -0.66
GABPA-202ENST00000400075 HIST1H2BHQ93079 126 aa10.95□□□□□ -0.66
GABPA-202ENST00000400075 HIST1H2BNQ99877 126 aa10.95□□□□□ -0.66
GABPA-202ENST00000400075 HIST1H2BMQ99879 126 aa10.95□□□□□ -0.66
GABPA-202ENST00000400075 K7EQG2 157 aa10.95□□□□□ -0.66
GABPA-202ENST00000400075 PSMB8P28062 276 aa10.95□□□□□ -0.66
GABPA-202ENST00000400075 HERVK_113P63121 156 aa10.95□□□□□ -0.66
GABPA-202ENST00000400075 DAZ2Q13117 558 aaKnown RBP10.95□□□□□ -0.66
GABPA-202ENST00000400075 DAZ4Q86SG3 579 aaKnown RBP10.95□□□□□ -0.66
GABPA-202ENST00000400075 CAMK2N2Q96S95 79 aa10.95□□□□□ -0.66
GABPA-202ENST00000400075 TMEM126AQ9H061 195 aa10.95□□□□□ -0.66
GABPA-202ENST00000400075 DAZ3Q9NR90 486 aaKnown RBP10.95□□□□□ -0.66
GABPA-202ENST00000400075 IGLV2-14P01704 120 aa10.94□□□□□ -0.66
GABPA-202ENST00000400075 MORN5Q5VZ52 161 aa10.94□□□□□ -0.66
GABPA-202ENST00000400075 TYMSP04818 313 aa10.93□□□□□ -0.66
GABPA-202ENST00000400075 MIFP14174 115 aa10.93□□□□□ -0.66
GABPA-202ENST00000400075 EDA2RQ9HAV5 297 aa10.93□□□□□ -0.66
GABPA-202ENST00000400075 KLK12Q9UKR0 248 aa10.93□□□□□ -0.66
GABPA-202ENST00000400075 MGAM2Q2M2H8 2515 aa10.93□□□□□ -0.66
GABPA-202ENST00000400075 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.93□□□□□ -0.66
GABPA-202ENST00000400075 IGKV2-29A2NJV5 120 aaPredicted RBP10.93□□□□□ -0.66
GABPA-202ENST00000400075 ZNF503Q96F45 646 aa10.93□□□□□ -0.66
GABPA-202ENST00000400075 LAMTOR3Q9UHA4 124 aa10.93□□□□□ -0.66
GABPA-202ENST00000400075 ERG28Q9UKR5 140 aa10.93□□□□□ -0.66
GABPA-202ENST00000400075 RNASE13Q5GAN3 156 aaKnown RBP10.93□□□□□ -0.66
GABPA-202ENST00000400075 C5orf38Q86SI9 138 aa10.93□□□□□ -0.66
GABPA-202ENST00000400075 POLR3KQ9Y2Y1 108 aaPredicted RBP10.93□□□□□ -0.66
GABPA-202ENST00000400075 LYRM9A8MSI8 78 aa10.92□□□□□ -0.66
GABPA-202ENST00000400075 C10orf126Q8N4M7 172 aa10.92□□□□□ -0.66
GABPA-202ENST00000400075 NUP210LQ5VU65 1888 aa10.92□□□□□ -0.66
GABPA-202ENST00000400075 TRBV7-3A0A075B6L6 115 aa10.92□□□□□ -0.66
GABPA-202ENST00000400075 TRAV26-1A0A087WT03 109 aa10.92□□□□□ -0.66
GABPA-202ENST00000400075 CTAG1AP78358 180 aa10.92□□□□□ -0.66
GABPA-202ENST00000400075 VSIG2Q96IQ7 327 aa10.92□□□□□ -0.66
GABPA-202ENST00000400075 ZFAND6Q6FIF0 208 aa10.91□□□□□ -0.66
GABPA-202ENST00000400075 HELZ2Q9BYK8 2649 aaKnown RBP10.91□□□□□ -0.66
GABPA-202ENST00000400075 A0A087X0K7 114 aa10.91□□□□□ -0.66
GABPA-202ENST00000400075 NPYP01303 97 aa10.91□□□□□ -0.66
GABPA-202ENST00000400075 V9GYV3 84 aa10.91□□□□□ -0.66
GABPA-202ENST00000400075 KMT2EQ8IZD2 1858 aa10.9□□□□□ -0.66
GABPA-202ENST00000400075 Q6ZS46 218 aa10.9□□□□□ -0.66
GABPA-202ENST00000400075 RPL18AQ02543 176 aaKnown RBP10.9□□□□□ -0.66
GABPA-202ENST00000400075 TRAV10A0A0B4J240 114 aa10.9□□□□□ -0.67
GABPA-202ENST00000400075 FAM167A-AS1Q96KT0 104 aa10.89□□□□□ -0.67
GABPA-202ENST00000400075 COX7A2LO14548 114 aa10.89□□□□□ -0.67
GABPA-202ENST00000400075 DDTP30046 118 aa10.89□□□□□ -0.67
GABPA-202ENST00000400075 ASPHD1Q5U4P2 390 aa10.89□□□□□ -0.67
GABPA-202ENST00000400075 USP24Q9UPU5 2620 aa10.89□□□□□ -0.67
GABPA-202ENST00000400075 NDUFA12Q9UI09 145 aa10.88□□□□□ -0.67
GABPA-202ENST00000400075 hDV102S1A0JD36 115 aa10.88□□□□□ -0.67
GABPA-202ENST00000400075 SYS1-DBNDD2H3BUS1 97 aa10.88□□□□□ -0.67
GABPA-202ENST00000400075 SUMO4Q6EEV6 95 aa10.88□□□□□ -0.67
GABPA-202ENST00000400075 Q8N6K4 173 aa10.88□□□□□ -0.67
GABPA-202ENST00000400075 SPANXA1Q9NS26 97 aa10.88□□□□□ -0.67
GABPA-202ENST00000400075 CRYGBP07316 175 aa10.87□□□□□ -0.67
GABPA-202ENST00000400075 ESDP10768 282 aa10.87□□□□□ -0.67
GABPA-202ENST00000400075 C1orf229Q6ZS94 237 aaPredicted RBP10.87□□□□□ -0.67
GABPA-202ENST00000400075 ORAOV1Q8WV07 137 aa10.87□□□□□ -0.67
GABPA-202ENST00000400075 LY6G6CO95867 125 aa10.87□□□□□ -0.67
GABPA-202ENST00000400075 IGLC2P0DOY2 106 aa10.87□□□□□ -0.67
GABPA-202ENST00000400075 TTC32Q5I0X7 151 aa10.87□□□□□ -0.67
GABPA-202ENST00000400075 C14orf177Q52M58 125 aa10.87□□□□□ -0.67
GABPA-202ENST00000400075 Q6ZTI0 123 aa10.87□□□□□ -0.67
GABPA-202ENST00000400075 C18orf65Q6ZTR6 163 aa10.87□□□□□ -0.67
GABPA-202ENST00000400075 MDFICQ9P1T7 246 aa10.87□□□□□ -0.67
GABPA-202ENST00000400075 KLF12Q9Y4X4 402 aa10.87□□□□□ -0.67
GABPA-202ENST00000400075 ATRQ13535 2644 aa10.86□□□□□ -0.67
GABPA-202ENST00000400075 TRAV4A0A0B4J268 109 aa10.86□□□□□ -0.67
GABPA-202ENST00000400075 K7ERU9 68 aa10.86□□□□□ -0.67
GABPA-202ENST00000400075 C18orf32Q8TCD1 76 aa10.86□□□□□ -0.67
GABPA-202ENST00000400075 SNHG12Q9BXW3 62 aa10.86□□□□□ -0.67
GABPA-202ENST00000400075 TIRAPP58753 221 aa10.86□□□□□ -0.67
GABPA-202ENST00000400075 COX11Q9Y6N1 276 aa10.86□□□□□ -0.67
GABPA-202ENST00000400075 A0A1B0GWB2 263 aa10.86□□□□□ -0.67
GABPA-202ENST00000400075 SMIM27A0A1W2PRY6 76 aa10.86□□□□□ -0.67
GABPA-202ENST00000400075 CEP350Q5VT06 3117 aa10.85□□□□□ -0.67
GABPA-202ENST00000400075 KIR2DL5BA0A0G2JN68 375 aa10.85□□□□□ -0.67
GABPA-202ENST00000400075 KIR2DL5BA0A0G2JPC4 375 aa10.85□□□□□ -0.67
GABPA-202ENST00000400075 TRBV10-1A0A0K0K1A3 114 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms