RNA–Protein interactions for RNA: ENST00000397728.7

LSS-202, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 4,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-202ENST00000397728 VWC2LB2RUY7 222 aa11.74□□□□□ -0.53
LSS-202ENST00000397728 MRPL23Q16540 153 aaKnown RBP11.74□□□□□ -0.53
LSS-202ENST00000397728 Q6ZQT7 251 aa11.73□□□□□ -0.53
LSS-202ENST00000397728 PLEKHB2Q96CS7 222 aa11.73□□□□□ -0.53
LSS-202ENST00000397728 ZNF625Q96I27 306 aaPredicted RBP11.73□□□□□ -0.53
LSS-202ENST00000397728 IGKV2D-24A0A075B6R9 120 aa11.72□□□□□ -0.53
LSS-202ENST00000397728 K7EN84 100 aa11.72□□□□□ -0.53
LSS-202ENST00000397728 Q8N8P6 123 aa11.72□□□□□ -0.53
LSS-202ENST00000397728 SIGMAR1Q99720 223 aa11.72□□□□□ -0.53
LSS-202ENST00000397728 TIMM21Q9BVV7 248 aa11.72□□□□□ -0.53
LSS-202ENST00000397728 ZC2HC1BQ5TFG8 222 aa11.72□□□□□ -0.53
LSS-202ENST00000397728 SMIM2Q9BVW6 85 aa11.72□□□□□ -0.53
LSS-202ENST00000397728 H3BMM0 161 aa11.72□□□□□ -0.53
LSS-202ENST00000397728 LGALS9O00182 355 aa11.72□□□□□ -0.53
LSS-202ENST00000397728 EIF4EBP1Q13541 118 aaPredicted RBP11.72□□□□□ -0.53
LSS-202ENST00000397728 UBE2WQ96B02 151 aa11.72□□□□□ -0.53
LSS-202ENST00000397728 IGHV1-24A0A0C4DH33 117 aa11.72□□□□□ -0.53
LSS-202ENST00000397728 SMIM27A0A1W2PRY6 76 aa11.72□□□□□ -0.53
LSS-202ENST00000397728 SLC25A20O43772 301 aa11.72□□□□□ -0.53
LSS-202ENST00000397728 NPYP01303 97 aa11.72□□□□□ -0.53
LSS-202ENST00000397728 IGLC2P0DOY2 106 aa11.72□□□□□ -0.53
LSS-202ENST00000397728 PSMB8P28062 276 aa11.72□□□□□ -0.53
LSS-202ENST00000397728 SFTA2Q6UW10 78 aa11.72□□□□□ -0.53
LSS-202ENST00000397728 Q8N6K4 173 aa11.72□□□□□ -0.53
LSS-202ENST00000397728 PYY3Q5JQD4 70 aa11.71□□□□□ -0.53
LSS-202ENST00000397728 C9orf47Q6ZRZ4 202 aa11.71□□□□□ -0.53
LSS-202ENST00000397728 LINC00482Q8N8I6 264 aa11.71□□□□□ -0.53
LSS-202ENST00000397728 ICOSQ9Y6W8 199 aa11.71□□□□□ -0.53
LSS-202ENST00000397728 TYMSP04818 313 aa11.71□□□□□ -0.54
LSS-202ENST00000397728 C18orf32Q8TCD1 76 aa11.71□□□□□ -0.54
LSS-202ENST00000397728 BRCA2P51587 3418 aa11.7□□□□□ -0.54
LSS-202ENST00000397728 F8W735 103 aaPredicted RBP11.7□□□□□ -0.54
LSS-202ENST00000397728 CST9LQ9H4G1 147 aa11.7□□□□□ -0.54
LSS-202ENST00000397728 C18orf65Q6ZTR6 163 aa11.7□□□□□ -0.54
LSS-202ENST00000397728 ATP6V0E2Q8NHE4 81 aa11.7□□□□□ -0.54
LSS-202ENST00000397728 CHAC1Q9BUX1 264 aa11.7□□□□□ -0.54
LSS-202ENST00000397728 SPCS1Q9Y6A9 102 aa11.7□□□□□ -0.54
LSS-202ENST00000397728 NDUFS6O75380 124 aaKnown RBP11.7□□□□□ -0.54
LSS-202ENST00000397728 RNASE13Q5GAN3 156 aaKnown RBP11.69□□□□□ -0.54
LSS-202ENST00000397728 POLR3KQ9Y2Y1 108 aaPredicted RBP11.69□□□□□ -0.54
LSS-202ENST00000397728 IGLL5B9A064 214 aa11.69□□□□□ -0.54
LSS-202ENST00000397728 UBE2V1Q13404 147 aa11.69□□□□□ -0.54
LSS-202ENST00000397728 C3orf79P0CE67 100 aa11.68□□□□□ -0.54
LSS-202ENST00000397728 MSRB1Q9NZV6 116 aa11.68□□□□□ -0.54
LSS-202ENST00000397728 A0A087X0K7 114 aa11.68□□□□□ -0.54
LSS-202ENST00000397728 TMEM238C9JI98 176 aa11.68□□□□□ -0.54
LSS-202ENST00000397728 K7EQG2 157 aa11.68□□□□□ -0.54
LSS-202ENST00000397728 C10orf91Q5T1B1 145 aa11.68□□□□□ -0.54
LSS-202ENST00000397728 NHP2Q9NX24 153 aaKnown RBP11.68□□□□□ -0.54
LSS-202ENST00000397728 KLK5Q9Y337 293 aaPredicted RBP11.68□□□□□ -0.54
LSS-202ENST00000397728 SIGLEC8Q9NYZ4 499 aa11.68□□□□□ -0.54
LSS-202ENST00000397728 MYMXA0A1B0GTQ4 84 aa11.68□□□□□ -0.54
LSS-202ENST00000397728 SYS1-DBNDD2H3BUS1 97 aa11.68□□□□□ -0.54
LSS-202ENST00000397728 HHLA3Q9XRX5 114 aa11.67□□□□□ -0.54
LSS-202ENST00000397728 HCFC1P51610 2035 aa11.67□□□□□ -0.54
LSS-202ENST00000397728 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.66□□□□□ -0.54
LSS-202ENST00000397728 IGKV2-29A2NJV5 120 aaPredicted RBP11.66□□□□□ -0.54
LSS-202ENST00000397728 PMVKQ15126 192 aa11.66□□□□□ -0.54
LSS-202ENST00000397728 C11orf45Q8TAV5 145 aa11.66□□□□□ -0.54
LSS-202ENST00000397728 TMEM141Q96I45 108 aa11.66□□□□□ -0.54
LSS-202ENST00000397728 C1orf43Q9BWL3 253 aa11.66□□□□□ -0.54
LSS-202ENST00000397728 GATA1P15976 413 aaPredicted RBP11.66□□□□□ -0.54
LSS-202ENST00000397728 PFN2P35080 140 aa11.66□□□□□ -0.54
LSS-202ENST00000397728 FAM110AQ9BQ89 295 aa11.66□□□□□ -0.54
LSS-202ENST00000397728 C20orf144Q9BQM9 153 aa11.66□□□□□ -0.54
LSS-202ENST00000397728 IGHV3-30P01768 117 aa11.66□□□□□ -0.54
LSS-202ENST00000397728 IGHV3-33P01772 117 aa11.66□□□□□ -0.54
LSS-202ENST00000397728 PRB2P02812 416 aaPredicted RBP11.66□□□□□ -0.54
LSS-202ENST00000397728 IGHV3-30-3P0DP02 117 aa11.66□□□□□ -0.54
LSS-202ENST00000397728 IGHV3-30-5P0DP03 117 aa11.66□□□□□ -0.54
LSS-202ENST00000397728 XCL1P47992 114 aa11.66□□□□□ -0.54
LSS-202ENST00000397728 C20orf78Q9BR46 151 aa11.66□□□□□ -0.54
LSS-202ENST00000397728 PTPRBP23467 1997 aa11.66□□□□□ -0.54
LSS-202ENST00000397728 hDV102S1A0JD36 115 aa11.65□□□□□ -0.54
LSS-202ENST00000397728 K7EQD1 137 aa11.65□□□□□ -0.54
LSS-202ENST00000397728 PLA2G2EQ9NZK7 142 aa11.65□□□□□ -0.54
LSS-202ENST00000397728 OXLD1Q5BKU9 147 aa11.65□□□□□ -0.54
LSS-202ENST00000397728 MDFICQ9P1T7 246 aa11.65□□□□□ -0.54
LSS-202ENST00000397728 TMEM263Q8WUH6 116 aaKnown RBP11.65□□□□□ -0.54
LSS-202ENST00000397728 C11orf1Q9H5F2 150 aa11.64□□□□□ -0.55
LSS-202ENST00000397728 RAI1Q7Z5J4 1906 aaPredicted RBP11.64□□□□□ -0.55
LSS-202ENST00000397728 LYPD6BQ8NI32 183 aa11.64□□□□□ -0.55
LSS-202ENST00000397728 ZFAND3Q9H8U3 227 aa11.64□□□□□ -0.55
LSS-202ENST00000397728 SUMO4Q6EEV6 95 aa11.63□□□□□ -0.55
LSS-202ENST00000397728 RPL39LQ96EH5 51 aaKnown RBP11.63□□□□□ -0.55
LSS-202ENST00000397728 SH2D6Q7Z4S9 175 aa11.63□□□□□ -0.55
LSS-202ENST00000397728 ZNF503Q96F45 646 aa11.63□□□□□ -0.55
LSS-202ENST00000397728 Q0VG73 95 aa11.63□□□□□ -0.55
LSS-202ENST00000397728 NXPH4O95158 308 aa11.63□□□□□ -0.55
LSS-202ENST00000397728 IGLV10-54A0A075B6I4 117 aa11.62□□□□□ -0.55
LSS-202ENST00000397728 HSD52Q0P140 79 aa11.62□□□□□ -0.55
LSS-202ENST00000397728 IL17DQ8TAD2 202 aa11.62□□□□□ -0.55
LSS-202ENST00000397728 NDUFA7O95182 113 aa11.62□□□□□ -0.55
LSS-202ENST00000397728 IGLV1-40P01703 118 aa11.62□□□□□ -0.55
LSS-202ENST00000397728 AMTNQ6UX39 209 aa11.62□□□□□ -0.55
LSS-202ENST00000397728 SPATA25Q9BR10 227 aa11.62□□□□□ -0.55
LSS-202ENST00000397728 A0A1B0GWB2 263 aa11.62□□□□□ -0.55
LSS-202ENST00000397728 KLF12Q9Y4X4 402 aa11.62□□□□□ -0.55
LSS-202ENST00000397728 ADAMTS20P59510 1910 aa11.62□□□□□ -0.55
LSS-202ENST00000397728 PRSS29PA6NIE9 313 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms